RNA–Protein interactions for RNA: ENST00000531690.5

GMDS-209, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 515 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-209ENST00000531690 TRAK1Q9UPV9 953 aa8.64□□□□□ -1.03
GMDS-209ENST00000531690 USP32Q8NFA0 1604 aa8.64□□□□□ -1.03
GMDS-209ENST00000531690 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
GMDS-209ENST00000531690 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
GMDS-209ENST00000531690 LRPPRCP42704 1394 aaKnown RBP8.62□□□□□ -1.03
GMDS-209ENST00000531690 PER1O15534 1290 aaPredicted RBP8.62□□□□□ -1.03
GMDS-209ENST00000531690 FKBP8Q14318 412 aa8.62□□□□□ -1.03
GMDS-209ENST00000531690 WDR43Q15061 677 aaKnown RBP eCLIP8.62□□□□□ -1.03
GMDS-209ENST00000531690 PNISRQ8TF01 805 aaKnown RBP8.62□□□□□ -1.03
GMDS-209ENST00000531690 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
GMDS-209ENST00000531690 RIMS2Q9UQ26 1411 aa8.62□□□□□ -1.03
GMDS-209ENST00000531690 ALKQ9UM73 1620 aa8.62□□□□□ -1.03
GMDS-209ENST00000531690 TNRQ92752 1358 aa8.61□□□□□ -1.03
GMDS-209ENST00000531690 FER1L4A9Z1Z3 1794 aa8.61□□□□□ -1.03
GMDS-209ENST00000531690 DLC1Q96QB1 1528 aa8.61□□□□□ -1.03
GMDS-209ENST00000531690 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
GMDS-209ENST00000531690 SMG6Q86US8 1419 aaKnown RBP8.61□□□□□ -1.03
GMDS-209ENST00000531690 YTHDC2Q9H6S0 1430 aaKnown RBP8.61□□□□□ -1.03
GMDS-209ENST00000531690 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
GMDS-209ENST00000531690 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
GMDS-209ENST00000531690 POGKQ9P215 609 aa8.6□□□□□ -1.03
GMDS-209ENST00000531690 BLMP54132 1417 aaPredicted RBP8.6□□□□□ -1.03
GMDS-209ENST00000531690 KNDC1Q76NI1 1749 aa8.6□□□□□ -1.03
GMDS-209ENST00000531690 NSD2O96028 1365 aa8.6□□□□□ -1.03
GMDS-209ENST00000531690 ZMYM3Q14202 1370 aa8.6□□□□□ -1.03
GMDS-209ENST00000531690 TULP4Q9NRJ4 1543 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 NLRP1Q9C000 1473 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 NUTM2DQ5VT03 806 aaPredicted RBP8.59□□□□□ -1.03
GMDS-209ENST00000531690 FBXO31Q5XUX0 539 aaPredicted RBP8.59□□□□□ -1.03
GMDS-209ENST00000531690 TMEM132EQ6IEE7 984 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 NUDCQ9Y266 331 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 NSD3Q9BZ95 1437 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 UBR1Q8IWV7 1749 aa8.59□□□□□ -1.03
GMDS-209ENST00000531690 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
GMDS-209ENST00000531690 AMER1Q5JTC6 1135 aaPredicted RBP8.58□□□□□ -1.04
GMDS-209ENST00000531690 ANKRD36BQ8N2N9 1353 aa8.58□□□□□ -1.04
GMDS-209ENST00000531690 PTPRMP28827 1452 aa8.57□□□□□ -1.04
GMDS-209ENST00000531690 SETD1AO15047 1707 aaKnown RBP8.57□□□□□ -1.04
GMDS-209ENST00000531690 CGNL1Q0VF96 1302 aa8.57□□□□□ -1.04
GMDS-209ENST00000531690 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
GMDS-209ENST00000531690 SRPK2P78362 688 aaKnown RBP8.57□□□□□ -1.04
GMDS-209ENST00000531690 C3P01024 1663 aa8.56□□□□□ -1.04
GMDS-209ENST00000531690 STK26Q9P289 416 aa8.56□□□□□ -1.04
GMDS-209ENST00000531690 ANKRD26Q9UPS8 1709 aa8.56□□□□□ -1.04
GMDS-209ENST00000531690 KIF20BQ96Q89 1820 aa8.55□□□□□ -1.04
GMDS-209ENST00000531690 BCANQ96GW7 911 aa8.55□□□□□ -1.04
GMDS-209ENST00000531690 CFAP53Q96M91 514 aa8.55□□□□□ -1.04
GMDS-209ENST00000531690 TERF2IPQ9NYB0 399 aa8.55□□□□□ -1.04
GMDS-209ENST00000531690 CPS1P31327 1500 aa8.54□□□□□ -1.04
GMDS-209ENST00000531690 NRXN3Q9Y4C0 1643 aa8.54□□□□□ -1.04
GMDS-209ENST00000531690 SPDYE4A6NLX3 237 aa8.54□□□□□ -1.04
GMDS-209ENST00000531690 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
GMDS-209ENST00000531690 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
GMDS-209ENST00000531690 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
GMDS-209ENST00000531690 DIP2AQ14689 1571 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 ATP7BP35670 1465 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 ABCC11Q96J66 1382 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 TMEM2Q9UHN6 1383 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 SAFB2Q14151 953 aaKnown RBP eCLIP8.53□□□□□ -1.04
GMDS-209ENST00000531690 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 EID1Q9Y6B2 187 aa8.53□□□□□ -1.04
GMDS-209ENST00000531690 POLR3AO14802 1390 aaPredicted RBP8.52□□□□□ -1.05
GMDS-209ENST00000531690 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
GMDS-209ENST00000531690 TECPR2O15040 1411 aa8.52□□□□□ -1.05
GMDS-209ENST00000531690 FAM135BQ49AJ0 1406 aa8.52□□□□□ -1.05
GMDS-209ENST00000531690 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
GMDS-209ENST00000531690 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
GMDS-209ENST00000531690 MED14O60244 1454 aa8.51□□□□□ -1.05
GMDS-209ENST00000531690 PLEKHG1Q9ULL1 1385 aa8.51□□□□□ -1.05
GMDS-209ENST00000531690 SLC12A5Q9H2X9 1139 aa8.51□□□□□ -1.05
GMDS-209ENST00000531690 A0A1W2PP64 1363 aa8.5□□□□□ -1.05
GMDS-209ENST00000531690 SLIT1O75093 1534 aa8.5□□□□□ -1.05
GMDS-209ENST00000531690 ADGRB2O60241 1585 aa8.5□□□□□ -1.05
GMDS-209ENST00000531690 PPP4R2Q9NY27 417 aa8.5□□□□□ -1.05
GMDS-209ENST00000531690 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
GMDS-209ENST00000531690 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
GMDS-209ENST00000531690 CDK19Q9BWU1 502 aa8.49□□□□□ -1.05
GMDS-209ENST00000531690 CARD14Q9BXL6 1004 aa8.49□□□□□ -1.05
GMDS-209ENST00000531690 CEP170BQ9Y4F5 1589 aaPredicted RBP8.48□□□□□ -1.05
GMDS-209ENST00000531690 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
GMDS-209ENST00000531690 SHPRHQ149N8 1683 aa8.48□□□□□ -1.05
GMDS-209ENST00000531690 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
GMDS-209ENST00000531690 ZNF142P52746 1687 aaPredicted RBP8.47□□□□□ -1.05
GMDS-209ENST00000531690 ARHGAP23Q9P227 1491 aa8.47□□□□□ -1.05
GMDS-209ENST00000531690 MON2Q7Z3U7 1717 aa8.47□□□□□ -1.05
GMDS-209ENST00000531690 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
GMDS-209ENST00000531690 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
GMDS-209ENST00000531690 IRX6P78412 446 aaPredicted RBP8.47□□□□□ -1.05
GMDS-209ENST00000531690 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
GMDS-209ENST00000531690 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
GMDS-209ENST00000531690 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.47□□□□□ -1.05
GMDS-209ENST00000531690 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
GMDS-209ENST00000531690 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
GMDS-209ENST00000531690 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
GMDS-209ENST00000531690 WASLO00401 505 aaPredicted RBP8.46□□□□□ -1.06
GMDS-209ENST00000531690 RRP1P56182 461 aaKnown RBP8.46□□□□□ -1.06
GMDS-209ENST00000531690 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
GMDS-209ENST00000531690 PROM2Q8N271 834 aa8.46□□□□□ -1.06
GMDS-209ENST00000531690 PNNQ9H307 717 aaKnown RBP8.46□□□□□ -1.06
GMDS-209ENST00000531690 RCAN3Q9UKA8 241 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms