RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ADAMTS2O95450 1211 aa30.96■■■□□ 2.55
TSPAN4-219ENST00000530404 UPF1Q92900 1129 aaKnown RBP eCLIP30.95■■■□□ 2.55
TSPAN4-219ENST00000530404 COL22A1Q8NFW1 1626 aaPredicted RBP30.95■■■□□ 2.54
TSPAN4-219ENST00000530404 RGPD8O14715 1765 aaPredicted RBP30.94■■■□□ 2.54
TSPAN4-219ENST00000530404 MARF1Q9Y4F3 1742 aaKnown RBP30.94■■■□□ 2.54
TSPAN4-219ENST00000530404 CDK12Q9NYV4 1490 aaPredicted RBP30.94■■■□□ 2.54
TSPAN4-219ENST00000530404 WAPLQ7Z5K2 1190 aa30.93■■■□□ 2.54
TSPAN4-219ENST00000530404 ANKRD30BQ9BXX2 1392 aa30.92■■■□□ 2.54
TSPAN4-219ENST00000530404 TMEM132EQ6IEE7 984 aa30.92■■■□□ 2.54
TSPAN4-219ENST00000530404 FMN2Q9NZ56 1722 aa30.92■■■□□ 2.54
TSPAN4-219ENST00000530404 TECPR2O15040 1411 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 PIK3C2GO75747 1445 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 NUTM2FA1L443 756 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 ESCO1Q5FWF5 840 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 QTRT2Q9H974 415 aaKnown RBP30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 LRPPRCP42704 1394 aaKnown RBP30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 PLEKHH1Q9ULM0 1364 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 RGS12O14924 1447 aa30.9■■■□□ 2.54
TSPAN4-219ENST00000530404 NGLY1Q96IV0 654 aa30.89■■■□□ 2.54
TSPAN4-219ENST00000530404 PXDNQ92626 1479 aa30.87■■■□□ 2.53
TSPAN4-219ENST00000530404 XPCQ01831 940 aaPredicted RBP30.86■■■□□ 2.53
TSPAN4-219ENST00000530404 YTHDC2Q9H6S0 1430 aaKnown RBP30.83■■■□□ 2.53
TSPAN4-219ENST00000530404 ABCC11Q96J66 1382 aa30.83■■■□□ 2.53
TSPAN4-219ENST00000530404 NPHP3Q7Z494 1330 aa30.83■■■□□ 2.53
TSPAN4-219ENST00000530404 RBM6P78332 1123 aaKnown RBP30.83■■■□□ 2.53
TSPAN4-219ENST00000530404 FOXO3O43524 673 aa30.82■■■□□ 2.52
TSPAN4-219ENST00000530404 KIF1AQ12756 1690 aa30.81■■■□□ 2.52
TSPAN4-219ENST00000530404 MYOM2P54296 1465 aa30.8■■■□□ 2.52
TSPAN4-219ENST00000530404 USP21Q9UK80 565 aa30.79■■■□□ 2.52
TSPAN4-219ENST00000530404 NRXN1Q9ULB1 1477 aa30.76■■■□□ 2.52
TSPAN4-219ENST00000530404 RAB3GAP2Q9H2M9 1393 aa30.76■■■□□ 2.51
TSPAN4-219ENST00000530404 CFAP70Q5T0N1 1121 aa30.74■■■□□ 2.51
TSPAN4-219ENST00000530404 C14orf93Q9H972 538 aaKnown RBP30.73■■■□□ 2.51
TSPAN4-219ENST00000530404 FNBP4Q8N3X1 1017 aaPredicted RBP30.71■■■□□ 2.51
TSPAN4-219ENST00000530404 TRPC5Q9UL62 973 aaPredicted RBP30.71■■■□□ 2.51
TSPAN4-219ENST00000530404 ATRNO75882 1429 aa30.71■■■□□ 2.51
TSPAN4-219ENST00000530404 EP400Q96L91 3159 aa30.7■■■□□ 2.51
TSPAN4-219ENST00000530404 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.69■■■□□ 2.5
TSPAN4-219ENST00000530404 DHX57Q6P158 1386 aaKnown RBP30.68■■■□□ 2.5
TSPAN4-219ENST00000530404 SAFB2Q14151 953 aaKnown RBP eCLIP30.68■■■□□ 2.5
TSPAN4-219ENST00000530404 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
TSPAN4-219ENST00000530404 BCL9LQ86UU0 1499 aa30.66■■■□□ 2.5
TSPAN4-219ENST00000530404 USP32Q8NFA0 1604 aa30.65■■■□□ 2.5
TSPAN4-219ENST00000530404 ABCA3Q99758 1704 aa30.65■■■□□ 2.5
TSPAN4-219ENST00000530404 SIRT1Q96EB6 747 aa30.65■■■□□ 2.5
TSPAN4-219ENST00000530404 SPATA31A3Q5VYP0 1347 aa30.64■■■□□ 2.5
TSPAN4-219ENST00000530404 KRT28Q7Z3Y7 464 aa30.63■■■□□ 2.49
TSPAN4-219ENST00000530404 PRAM1Q96QH2 718 aa30.63■■■□□ 2.49
TSPAN4-219ENST00000530404 DLC1Q96QB1 1528 aa30.61■■■□□ 2.49
TSPAN4-219ENST00000530404 ADGRB1O14514 1584 aa30.61■■■□□ 2.49
TSPAN4-219ENST00000530404 BRWD3Q6RI45 1802 aa30.6■■■□□ 2.49
TSPAN4-219ENST00000530404 PHF8Q9UPP1 1060 aa30.6■■■□□ 2.49
TSPAN4-219ENST00000530404 PLCH1Q4KWH8 1693 aa30.59■■■□□ 2.49
TSPAN4-219ENST00000530404 ATAD2Q6PL18 1390 aa30.59■■■□□ 2.49
TSPAN4-219ENST00000530404 PLEKHG5O94827 1062 aa30.59■■■□□ 2.49
TSPAN4-219ENST00000530404 ADGRB2O60241 1585 aa30.58■■■□□ 2.49
TSPAN4-219ENST00000530404 TNS3Q68CZ2 1445 aa30.57■■■□□ 2.48
TSPAN4-219ENST00000530404 GLI3P10071 1580 aa30.57■■■□□ 2.48
TSPAN4-219ENST00000530404 POGKQ9P215 609 aa30.56■■■□□ 2.48
TSPAN4-219ENST00000530404 KDM2AQ9Y2K7 1162 aa30.56■■■□□ 2.48
TSPAN4-219ENST00000530404 SLIT2O94813 1529 aa30.54■■■□□ 2.48
TSPAN4-219ENST00000530404 TRAK1Q9UPV9 953 aa30.54■■■□□ 2.48
TSPAN4-219ENST00000530404 TRPM3Q9HCF6 1732 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-219ENST00000530404 CABLES1Q8TDN4 633 aa30.53■■■□□ 2.48
TSPAN4-219ENST00000530404 GJD4Q96KN9 370 aaPredicted RBP30.53■■■□□ 2.48
TSPAN4-219ENST00000530404 PMFBP1Q8TBY8 1022 aa30.52■■■□□ 2.48
TSPAN4-219ENST00000530404 HIRIP3Q9BW71 556 aaPredicted RBP30.52■■■□□ 2.48
TSPAN4-219ENST00000530404 ARHGEF28Q8N1W1 1705 aaKnown RBP30.51■■■□□ 2.47
TSPAN4-219ENST00000530404 NWD2Q9ULI1 1742 aa30.51■■■□□ 2.47
TSPAN4-219ENST00000530404 DCAF11Q8TEB1 546 aa30.51■■■□□ 2.47
TSPAN4-219ENST00000530404 HAP1P54257 671 aaPredicted RBP30.5■■■□□ 2.47
TSPAN4-219ENST00000530404 PSME1Q06323 249 aa30.5■■■□□ 2.47
TSPAN4-219ENST00000530404 LMOD2Q6P5Q4 547 aa30.5■■■□□ 2.47
TSPAN4-219ENST00000530404 RALGAPBQ86X10 1494 aa30.5■■■□□ 2.47
TSPAN4-219ENST00000530404 UNC5CLQ8IV45 518 aa30.49■■■□□ 2.47
TSPAN4-219ENST00000530404 MINK1Q8N4C8 1332 aaPredicted RBP30.48■■■□□ 2.47
TSPAN4-219ENST00000530404 ANKARQ7Z5J8 1434 aa30.47■■■□□ 2.47
TSPAN4-219ENST00000530404 ALS2Q96Q42 1657 aa30.47■■■□□ 2.47
TSPAN4-219ENST00000530404 SBNO1A3KN83 1393 aa30.47■■■□□ 2.47
TSPAN4-219ENST00000530404 TULP4Q9NRJ4 1543 aa30.43■■■□□ 2.46
TSPAN4-219ENST00000530404 ITSN1Q15811 1721 aa30.43■■■□□ 2.46
TSPAN4-219ENST00000530404 NRAPQ86VF7 1730 aa30.42■■■□□ 2.46
TSPAN4-219ENST00000530404 PRR36Q9H6K5 1346 aa30.42■■■□□ 2.46
TSPAN4-219ENST00000530404 ARHGEF10O15013 1369 aa30.41■■■□□ 2.46
TSPAN4-219ENST00000530404 SRCAPQ6ZRS2 3230 aa30.41■■■□□ 2.46
TSPAN4-219ENST00000530404 CRYBG1Q9Y4K1 1723 aa30.41■■■□□ 2.46
TSPAN4-219ENST00000530404 WASLO00401 505 aaPredicted RBP30.35■■■□□ 2.45
TSPAN4-219ENST00000530404 CCDC9Q9Y3X0 531 aaKnown RBP30.35■■■□□ 2.45
TSPAN4-219ENST00000530404 COL14A1Q05707 1796 aaKnown RBP30.34■■■□□ 2.45
TSPAN4-219ENST00000530404 EIF3AQ14152 1382 aaKnown RBP30.34■■■□□ 2.45
TSPAN4-219ENST00000530404 GPRASP1Q5JY77 1395 aa30.33■■■□□ 2.45
TSPAN4-219ENST00000530404 FAM83GA6ND36 823 aa30.33■■■□□ 2.45
TSPAN4-219ENST00000530404 HRCP23327 699 aa30.33■■■□□ 2.45
TSPAN4-219ENST00000530404 VPS72Q15906 364 aa30.33■■■□□ 2.45
TSPAN4-219ENST00000530404 KIAA1210Q9ULL0 1709 aa30.32■■■□□ 2.44
TSPAN4-219ENST00000530404 SEPT12Q8IYM1 358 aa30.31■■■□□ 2.44
TSPAN4-219ENST00000530404 CCDC125Q86Z20 511 aa30.29■■■□□ 2.44
TSPAN4-219ENST00000530404 STAC3Q96MF2 364 aa30.29■■■□□ 2.44
TSPAN4-219ENST00000530404 ATP7BP35670 1465 aa30.29■■■□□ 2.44
TSPAN4-219ENST00000530404 TOPAZ1Q8N9V7 1692 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms