RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 BLMP54132 1417 aaPredicted RBP8.63□□□□□ -1.03
CTSB-216ENST00000530290 LRPPRCP42704 1394 aaKnown RBP8.62□□□□□ -1.03
CTSB-216ENST00000530290 ADAMTS2O95450 1211 aa8.61□□□□□ -1.03
CTSB-216ENST00000530290 ZNF326Q5BKZ1 582 aaKnown RBP8.61□□□□□ -1.03
CTSB-216ENST00000530290 KIF1AQ12756 1690 aa8.61□□□□□ -1.03
CTSB-216ENST00000530290 CLTCL1P53675 1640 aa8.61□□□□□ -1.03
CTSB-216ENST00000530290 NWD2Q9ULI1 1742 aa8.6□□□□□ -1.03
CTSB-216ENST00000530290 RPGRIP1LQ68CZ1 1315 aa8.59□□□□□ -1.03
CTSB-216ENST00000530290 BCL9LQ86UU0 1499 aa8.59□□□□□ -1.03
CTSB-216ENST00000530290 PXDNQ92626 1479 aa8.59□□□□□ -1.03
CTSB-216ENST00000530290 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
CTSB-216ENST00000530290 PPLO60437 1756 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 USP32Q8NFA0 1604 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 KNDC1Q76NI1 1749 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 YY1P25490 414 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 GJD4Q96KN9 370 aaPredicted RBP8.58□□□□□ -1.04
CTSB-216ENST00000530290 SLIT2O94813 1529 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 ROBO2Q9HCK4 1378 aa8.58□□□□□ -1.04
CTSB-216ENST00000530290 CCDC144AA2RUR9 1427 aa8.57□□□□□ -1.04
CTSB-216ENST00000530290 TECPR2O15040 1411 aa8.57□□□□□ -1.04
CTSB-216ENST00000530290 SF3B2Q13435 895 aaKnown RBP8.57□□□□□ -1.04
CTSB-216ENST00000530290 DDX17Q92841 729 aaKnown RBP8.57□□□□□ -1.04
CTSB-216ENST00000530290 GLI3P10071 1580 aa8.56□□□□□ -1.04
CTSB-216ENST00000530290 LOC105371045A0A1W2PR82 267 aa8.56□□□□□ -1.04
CTSB-216ENST00000530290 UNC5CLQ8IV45 518 aa8.56□□□□□ -1.04
CTSB-216ENST00000530290 BRWD3Q6RI45 1802 aa8.56□□□□□ -1.04
CTSB-216ENST00000530290 RALGAPBQ86X10 1494 aa8.56□□□□□ -1.04
CTSB-216ENST00000530290 ORAI2Q96SN7 254 aa8.55□□□□□ -1.04
CTSB-216ENST00000530290 FMN2Q9NZ56 1722 aa8.54□□□□□ -1.04
CTSB-216ENST00000530290 HRCP23327 699 aa8.54□□□□□ -1.04
CTSB-216ENST00000530290 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
CTSB-216ENST00000530290 RGPD1P0DJD0 1748 aa8.54□□□□□ -1.04
CTSB-216ENST00000530290 PLCH1Q4KWH8 1693 aa8.53□□□□□ -1.04
CTSB-216ENST00000530290 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
CTSB-216ENST00000530290 NAIPQ13075 1403 aa8.53□□□□□ -1.04
CTSB-216ENST00000530290 TNS3Q68CZ2 1445 aa8.53□□□□□ -1.04
CTSB-216ENST00000530290 ABCA3Q99758 1704 aa8.52□□□□□ -1.05
CTSB-216ENST00000530290 VPS72Q15906 364 aa8.52□□□□□ -1.05
CTSB-216ENST00000530290 DISP2A7MBM2 1401 aa8.52□□□□□ -1.05
CTSB-216ENST00000530290 ADGRB2O60241 1585 aa8.52□□□□□ -1.05
CTSB-216ENST00000530290 SPATA31A3Q5VYP0 1347 aa8.52□□□□□ -1.05
CTSB-216ENST00000530290 IFT172Q9UG01 1749 aa8.51□□□□□ -1.05
CTSB-216ENST00000530290 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
CTSB-216ENST00000530290 ABCC11Q96J66 1382 aa8.51□□□□□ -1.05
CTSB-216ENST00000530290 ANKRD30BQ9BXX2 1392 aa8.51□□□□□ -1.05
CTSB-216ENST00000530290 PSDA5PKW4 1024 aaPredicted RBP8.51□□□□□ -1.05
CTSB-216ENST00000530290 BAG6P46379 1132 aa8.51□□□□□ -1.05
CTSB-216ENST00000530290 SBNO1A3KN83 1393 aa8.5□□□□□ -1.05
CTSB-216ENST00000530290 ONECUT3O60422 494 aaPredicted RBP8.5□□□□□ -1.05
CTSB-216ENST00000530290 RRBP1Q9P2E9 1410 aaKnown RBP8.5□□□□□ -1.05
CTSB-216ENST00000530290 NRAPQ86VF7 1730 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 SENP3-EIF4A1A0A087X0R7 540 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 FOXO3O43524 673 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 HAP1P54257 671 aaPredicted RBP8.49□□□□□ -1.05
CTSB-216ENST00000530290 PSME1Q06323 249 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 KRT27Q7Z3Y8 459 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 SEPT12Q8IYM1 358 aa8.49□□□□□ -1.05
CTSB-216ENST00000530290 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
CTSB-216ENST00000530290 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
CTSB-216ENST00000530290 SIRT1Q96EB6 747 aa8.48□□□□□ -1.05
CTSB-216ENST00000530290 NRXN1Q9ULB1 1477 aa8.48□□□□□ -1.05
CTSB-216ENST00000530290 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
CTSB-216ENST00000530290 PIK3C2GO75747 1445 aa8.47□□□□□ -1.05
CTSB-216ENST00000530290 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
CTSB-216ENST00000530290 TNS1Q9HBL0 1735 aaKnown RBP8.46□□□□□ -1.05
CTSB-216ENST00000530290 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.06
CTSB-216ENST00000530290 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.06
CTSB-216ENST00000530290 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.06
CTSB-216ENST00000530290 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
CTSB-216ENST00000530290 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
CTSB-216ENST00000530290 CCDC9Q9Y3X0 531 aaKnown RBP8.45□□□□□ -1.06
CTSB-216ENST00000530290 SPATA31E1Q6ZUB1 1445 aa8.45□□□□□ -1.06
CTSB-216ENST00000530290 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
CTSB-216ENST00000530290 ALS2Q96Q42 1657 aa8.44□□□□□ -1.06
CTSB-216ENST00000530290 ITGAEP38570 1179 aa8.44□□□□□ -1.06
CTSB-216ENST00000530290 XPCQ01831 940 aaPredicted RBP8.44□□□□□ -1.06
CTSB-216ENST00000530290 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
CTSB-216ENST00000530290 PHF8Q9UPP1 1060 aa8.44□□□□□ -1.06
CTSB-216ENST00000530290 TRPM3Q9HCF6 1732 aaPredicted RBP8.43□□□□□ -1.06
CTSB-216ENST00000530290 A0A0G2JS52 829 aa8.43□□□□□ -1.06
CTSB-216ENST00000530290 MYT1Q01538 1121 aa8.43□□□□□ -1.06
CTSB-216ENST00000530290 C1QTNF8P60827 252 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 ZNF784Q8NCA9 323 aaPredicted RBP8.42□□□□□ -1.06
CTSB-216ENST00000530290 ADGRF5Q8IZF2 1346 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 GPRASP1Q5JY77 1395 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 DHX57Q6P158 1386 aaKnown RBP8.42□□□□□ -1.06
CTSB-216ENST00000530290 RREB1Q92766 1687 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 ITSN1Q15811 1721 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
CTSB-216ENST00000530290 RGPD3A6NKT7 1758 aaPredicted RBP8.41□□□□□ -1.06
CTSB-216ENST00000530290 RGPD4Q7Z3J3 1758 aa8.41□□□□□ -1.06
CTSB-216ENST00000530290 PLEKHH1Q9ULM0 1364 aa8.41□□□□□ -1.06
CTSB-216ENST00000530290 C11orf95C9JLR9 678 aaPredicted RBP8.41□□□□□ -1.06
CTSB-216ENST00000530290 WAPLQ7Z5K2 1190 aa8.41□□□□□ -1.06
CTSB-216ENST00000530290 TULP4Q9NRJ4 1543 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 ATP7BP35670 1465 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 NINLQ9Y2I6 1382 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 SPATA31A5Q5VU36 1347 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 SPATA31A7Q8IWB4 1347 aa8.4□□□□□ -1.06
CTSB-216ENST00000530290 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms