RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 RRP9O43818 475 aaKnown RBP9.23□□□□□ -0.93
CTNND1-223ENST00000529986 HSP90AB3PQ58FF7 597 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 NGEFQ8N5V2 710 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 RUFY2Q8WXA3 655 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 ARAP1Q96P48 1450 aa9.23□□□□□ -0.93
CTNND1-223ENST00000529986 KDM4AO75164 1064 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 TRIM29Q14134 588 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 FMNL2Q96PY5 1086 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 PTPRGP23470 1445 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 EIF2S2P20042 333 aaKnown RBP9.22□□□□□ -0.93
CTNND1-223ENST00000529986 RRBP1Q9P2E9 1410 aaKnown RBP9.22□□□□□ -0.93
CTNND1-223ENST00000529986 RDXP35241 583 aaKnown RBP9.22□□□□□ -0.93
CTNND1-223ENST00000529986 ANKRD20A12PQ8NF67 263 aa9.22□□□□□ -0.93
CTNND1-223ENST00000529986 UACAQ9BZF9 1416 aa9.21□□□□□ -0.93
CTNND1-223ENST00000529986 PRXQ9BXM0 1461 aa9.21□□□□□ -0.93
CTNND1-223ENST00000529986 ESPNB1AK53 854 aa9.21□□□□□ -0.93
CTNND1-223ENST00000529986 IFIT2P09913 472 aaKnown RBP9.21□□□□□ -0.93
CTNND1-223ENST00000529986 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.93
CTNND1-223ENST00000529986 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.93
CTNND1-223ENST00000529986 RIPK4P57078 832 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 BACH2Q9BYV9 841 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 TSPYL1Q9H0U9 437 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 SMC2O95347 1197 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 SDF4Q9BRK5 362 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 CHMP4AQ9BY43 222 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
CTNND1-223ENST00000529986 CAGE1Q8TC20 777 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 KIF3BO15066 747 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 FIBPO43427 364 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 CDC45O75419 566 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 CPLX2Q6PUV4 134 aaKnown RBP9.2□□□□□ -0.94
CTNND1-223ENST00000529986 LEKR1Q6ZMV7 388 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 AKNAQ7Z591 1439 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 GRIN2BQ13224 1484 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
CTNND1-223ENST00000529986 KIF7Q2M1P5 1343 aa9.19□□□□□ -0.94
CTNND1-223ENST00000529986 AXDND1Q5T1B0 1012 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-223ENST00000529986 C9orf78Q9NZ63 289 aaPredicted RBP9.19□□□□□ -0.94
CTNND1-223ENST00000529986 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
CTNND1-223ENST00000529986 NEK4P51957 841 aa9.19□□□□□ -0.94
CTNND1-223ENST00000529986 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.19□□□□□ -0.94
CTNND1-223ENST00000529986 NGDNQ8NEJ9 315 aaKnown RBP9.19□□□□□ -0.94
CTNND1-223ENST00000529986 CBX1P83916 185 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CEBPZQ03701 1054 aaKnown RBP9.18□□□□□ -0.94
CTNND1-223ENST00000529986 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
CTNND1-223ENST00000529986 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 MBD3O95983 291 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 NFXL1Q6ZNB6 911 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CCDC191Q8NCU4 936 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CHMP4CQ96CF2 233 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 RAD21O60216 631 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CDR1P51861 262 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 FAM177A1Q8N128 213 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-223ENST00000529986 API5Q9BZZ5 524 aaKnown RBP9.18□□□□□ -0.94
CTNND1-223ENST00000529986 FKBP5Q13451 457 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CCDC7Q96M83 1385 aa9.18□□□□□ -0.94
CTNND1-223ENST00000529986 CCDC112Q8NEF3 446 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 NAT10Q9H0A0 1025 aaKnown RBP9.17□□□□□ -0.94
CTNND1-223ENST00000529986 ADAMTS8Q9UP79 889 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 TIAM1Q13009 1591 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 C1orf115Q9H7X2 142 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.942e-9■■■□□ 18.1
CTNND1-223ENST00000529986 OLFM4Q6UX06 510 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 HECW1Q76N89 1606 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 MRC2Q9UBG0 1479 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-223ENST00000529986 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
CTNND1-223ENST00000529986 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 BICRAQ9NZM4 1560 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 ERCC4Q92889 916 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-223ENST00000529986 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
CTNND1-223ENST00000529986 RUNDC1Q96C34 613 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 SKAP1Q86WV1 359 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 WASHC2AQ641Q2 1341 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 MCM4P33991 863 aa9.16□□□□□ -0.94
CTNND1-223ENST00000529986 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-223ENST00000529986 ZHX1Q9UKY1 873 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-223ENST00000529986 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
CTNND1-223ENST00000529986 DIAPH1O60610 1272 aaKnown RBP9.15□□□□□ -0.94
CTNND1-223ENST00000529986 BCAR3O75815 825 aa9.15□□□□□ -0.94
CTNND1-223ENST00000529986 TRDNQ13061 729 aa9.15□□□□□ -0.94
CTNND1-223ENST00000529986 CNTLNQ9NXG0 1405 aa9.15□□□□□ -0.94
CTNND1-223ENST00000529986 HMOX1P09601 288 aa9.15□□□□□ -0.95
CTNND1-223ENST00000529986 ATP2B1P20020 1258 aa9.15□□□□□ -0.95
CTNND1-223ENST00000529986 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.95
CTNND1-223ENST00000529986 IFT140Q96RY7 1462 aa9.15□□□□□ -0.95
CTNND1-223ENST00000529986 CT47B1P0C2W7 299 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-223ENST00000529986 G3BP1Q13283 466 aaKnown RBP eCLIP9.14□□□□□ -0.958e-9■□□□□ 11.1
CTNND1-223ENST00000529986 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 TMX4Q9H1E5 349 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-223ENST00000529986 WASHC2CQ9Y4E1 1318 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
CTNND1-223ENST00000529986 DCTN1Q14203 1278 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 DHX16O60231 1041 aaKnown RBP9.14□□□□□ -0.95
CTNND1-223ENST00000529986 EID1Q9Y6B2 187 aa9.14□□□□□ -0.95
CTNND1-223ENST00000529986 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms