RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 PNPLA6Q8IY17 1366 aa16.49■□□□□ 0.23
CTSC-206ENST00000529974 TMEM132EQ6IEE7 984 aa16.48■□□□□ 0.23
CTSC-206ENST00000529974 HRCP23327 699 aa16.47■□□□□ 0.23
CTSC-206ENST00000529974 STK26Q9P289 416 aa16.47■□□□□ 0.23
CTSC-206ENST00000529974 DLC1Q96QB1 1528 aa16.46■□□□□ 0.23
CTSC-206ENST00000529974 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
CTSC-206ENST00000529974 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
CTSC-206ENST00000529974 ORAI2Q96SN7 254 aa16.46■□□□□ 0.23
CTSC-206ENST00000529974 C14orf93Q9H972 538 aaKnown RBP16.46■□□□□ 0.23
CTSC-206ENST00000529974 PXDNQ92626 1479 aa16.45■□□□□ 0.22
CTSC-206ENST00000529974 KIF1AQ12756 1690 aa16.44■□□□□ 0.22
CTSC-206ENST00000529974 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
CTSC-206ENST00000529974 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
CTSC-206ENST00000529974 SOS2Q07890 1332 aaPredicted RBP16.44■□□□□ 0.22
CTSC-206ENST00000529974 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
CTSC-206ENST00000529974 RGPD8O14715 1765 aaPredicted RBP16.43■□□□□ 0.22
CTSC-206ENST00000529974 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
CTSC-206ENST00000529974 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
CTSC-206ENST00000529974 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
CTSC-206ENST00000529974 ARHGEF28Q8N1W1 1705 aaKnown RBP16.4■□□□□ 0.22
CTSC-206ENST00000529974 NUTM2BA6NNL0 878 aaPredicted RBP16.4■□□□□ 0.22
CTSC-206ENST00000529974 NUTM2EB1AL46 878 aaPredicted RBP16.4■□□□□ 0.22
CTSC-206ENST00000529974 NUTM2AQ8IVF1 878 aaPredicted RBP16.4■□□□□ 0.22
CTSC-206ENST00000529974 SIRT1Q96EB6 747 aa16.4■□□□□ 0.22
CTSC-206ENST00000529974 MARF1Q9Y4F3 1742 aaKnown RBP16.38■□□□□ 0.21
CTSC-206ENST00000529974 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
CTSC-206ENST00000529974 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
CTSC-206ENST00000529974 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
CTSC-206ENST00000529974 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
CTSC-206ENST00000529974 PRAM1Q96QH2 718 aa16.36■□□□□ 0.21
CTSC-206ENST00000529974 AFF2P51816 1311 aa16.36■□□□□ 0.21
CTSC-206ENST00000529974 ZNF772Q68DY9 489 aaPredicted RBP16.35■□□□□ 0.21
CTSC-206ENST00000529974 DCAF11Q8TEB1 546 aa16.35■□□□□ 0.21
CTSC-206ENST00000529974 ABCA3Q99758 1704 aa16.33■□□□□ 0.21
CTSC-206ENST00000529974 FOXO3O43524 673 aa16.33■□□□□ 0.2
CTSC-206ENST00000529974 XPCQ01831 940 aaPredicted RBP16.33■□□□□ 0.2
CTSC-206ENST00000529974 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
CTSC-206ENST00000529974 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
CTSC-206ENST00000529974 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
CTSC-206ENST00000529974 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
CTSC-206ENST00000529974 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
CTSC-206ENST00000529974 TRPM3Q9HCF6 1732 aaPredicted RBP16.31■□□□□ 0.2
CTSC-206ENST00000529974 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
CTSC-206ENST00000529974 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
CTSC-206ENST00000529974 ADAMTS2O95450 1211 aa16.3■□□□□ 0.2
CTSC-206ENST00000529974 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
CTSC-206ENST00000529974 EP400Q96L91 3159 aa16.3■□□□□ 0.2
CTSC-206ENST00000529974 RGS12O14924 1447 aa16.29■□□□□ 0.2
CTSC-206ENST00000529974 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
CTSC-206ENST00000529974 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
CTSC-206ENST00000529974 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
CTSC-206ENST00000529974 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
CTSC-206ENST00000529974 POGKQ9P215 609 aa16.28■□□□□ 0.2
CTSC-206ENST00000529974 TOPAZ1Q8N9V7 1692 aa16.27■□□□□ 0.2
CTSC-206ENST00000529974 ALS2Q96Q42 1657 aa16.27■□□□□ 0.2
CTSC-206ENST00000529974 PHF8Q9UPP1 1060 aa16.27■□□□□ 0.2
CTSC-206ENST00000529974 ATP7BP35670 1465 aa16.27■□□□□ 0.19
CTSC-206ENST00000529974 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
CTSC-206ENST00000529974 RXRBP28702 533 aa16.26■□□□□ 0.19
CTSC-206ENST00000529974 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
CTSC-206ENST00000529974 ATRNO75882 1429 aa16.26■□□□□ 0.19
CTSC-206ENST00000529974 CRYBG1Q9Y4K1 1723 aa16.25■□□□□ 0.19
CTSC-206ENST00000529974 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
CTSC-206ENST00000529974 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
CTSC-206ENST00000529974 PLCH1Q4KWH8 1693 aa16.24■□□□□ 0.19
CTSC-206ENST00000529974 BCL9LQ86UU0 1499 aa16.24■□□□□ 0.19
CTSC-206ENST00000529974 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
CTSC-206ENST00000529974 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
CTSC-206ENST00000529974 NGLY1Q96IV0 654 aa16.24■□□□□ 0.19
CTSC-206ENST00000529974 SBNO1A3KN83 1393 aa16.24■□□□□ 0.19
CTSC-206ENST00000529974 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
CTSC-206ENST00000529974 QTRT2Q9H974 415 aaKnown RBP16.22■□□□□ 0.19
CTSC-206ENST00000529974 SLIT2O94813 1529 aa16.22■□□□□ 0.19
CTSC-206ENST00000529974 QRICH2Q9H0J4 1663 aa16.21■□□□□ 0.19
CTSC-206ENST00000529974 WASLO00401 505 aaPredicted RBP16.21■□□□□ 0.19
CTSC-206ENST00000529974 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
CTSC-206ENST00000529974 USP21Q9UK80 565 aa16.21■□□□□ 0.19
CTSC-206ENST00000529974 NWD2Q9ULI1 1742 aa16.2■□□□□ 0.18
CTSC-206ENST00000529974 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
CTSC-206ENST00000529974 GLI3P10071 1580 aa16.2■□□□□ 0.18
CTSC-206ENST00000529974 ARHGEF10O15013 1369 aa16.19■□□□□ 0.18
CTSC-206ENST00000529974 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
CTSC-206ENST00000529974 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
CTSC-206ENST00000529974 PSME1Q06323 249 aa16.17■□□□□ 0.18
CTSC-206ENST00000529974 UPF1Q92900 1129 aaKnown RBP eCLIP16.17■□□□□ 0.18
CTSC-206ENST00000529974 TRPC5Q9UL62 973 aaPredicted RBP16.17■□□□□ 0.18
CTSC-206ENST00000529974 PHRF1Q9P1Y6 1649 aaKnown RBP16.16■□□□□ 0.18
CTSC-206ENST00000529974 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
CTSC-206ENST00000529974 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
CTSC-206ENST00000529974 SIN3AQ96ST3 1273 aa16.16■□□□□ 0.18
CTSC-206ENST00000529974 RALGAPBQ86X10 1494 aa16.15■□□□□ 0.18
CTSC-206ENST00000529974 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
CTSC-206ENST00000529974 COL14A1Q05707 1796 aaKnown RBP16.13■□□□□ 0.17
CTSC-206ENST00000529974 NUDT16Q96DE0 195 aaKnown RBP16.13■□□□□ 0.17
CTSC-206ENST00000529974 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
CTSC-206ENST00000529974 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
CTSC-206ENST00000529974 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
CTSC-206ENST00000529974 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
CTSC-206ENST00000529974 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
CTSC-206ENST00000529974 CENPJQ9HC77 1338 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms