RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 BRD4O60885 1362 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-221ENST00000529873 TRDNQ13061 729 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 MRC2Q9UBG0 1479 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 PLEKHH2Q8IVE3 1493 aa10.32□□□□□ -0.76
CTNND1-221ENST00000529873 SMG6Q86US8 1419 aaKnown RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 CPLX1O14810 134 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 SYTL4Q96C24 671 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 RAD21O60216 631 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 GSE1Q14687 1217 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 FOXD4L3Q6VB84 417 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-221ENST00000529873 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
CTNND1-221ENST00000529873 HMOX1P09601 288 aa10.3□□□□□ -0.76
CTNND1-221ENST00000529873 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
CTNND1-221ENST00000529873 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-221ENST00000529873 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
CTNND1-221ENST00000529873 ZNF771Q7L3S4 317 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-221ENST00000529873 IFT140Q96RY7 1462 aa10.29□□□□□ -0.76
CTNND1-221ENST00000529873 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
CTNND1-221ENST00000529873 SMC3Q9UQE7 1217 aa10.29□□□□□ -0.76
CTNND1-221ENST00000529873 TEX35Q5T0J7 233 aa10.29□□□□□ -0.76
CTNND1-221ENST00000529873 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
CTNND1-221ENST00000529873 CDC45O75419 566 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
CTNND1-221ENST00000529873 NOM1Q5C9Z4 860 aaKnown RBP10.28□□□□□ -0.76
CTNND1-221ENST00000529873 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 FANCIQ9NVI1 1328 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-221ENST00000529873 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-221ENST00000529873 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
CTNND1-221ENST00000529873 NUCB2P80303 420 aa10.27□□□□□ -0.76
CTNND1-221ENST00000529873 CNTROBQ8N137 903 aa10.27□□□□□ -0.76
CTNND1-221ENST00000529873 CCDC30Q5VVM6 783 aa10.27□□□□□ -0.77
CTNND1-221ENST00000529873 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.77
CTNND1-221ENST00000529873 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
CTNND1-221ENST00000529873 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 C9orf84Q5VXU9 1444 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 PSMA5P28066 241 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTNND1-221ENST00000529873 CCAR2Q8N163 923 aaKnown RBP10.26□□□□□ -0.77
CTNND1-221ENST00000529873 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
CTNND1-221ENST00000529873 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
CTNND1-221ENST00000529873 KIF6Q6ZMV9 814 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 NEUROD6Q96NK8 337 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 VPS37CA5D8V6 355 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-221ENST00000529873 IPO7O95373 1038 aaKnown RBP10.25□□□□□ -0.77
CTNND1-221ENST00000529873 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 CFTRP13569 1480 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 PANK1Q8TE04 598 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
CTNND1-221ENST00000529873 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-221ENST00000529873 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
CTNND1-221ENST00000529873 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-221ENST00000529873 CC2D2AQ9P2K1 1620 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 FOSBP53539 338 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 LNPKQ9C0E8 428 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
CTNND1-221ENST00000529873 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 TIAM1Q13009 1591 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 HIP1O00291 1037 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 CDR1P51861 262 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 CCDC73Q6ZRK6 1079 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
CTNND1-221ENST00000529873 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
CTNND1-221ENST00000529873 XBP1P17861 261 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 NLRP6P59044 892 aa10.23□□□□□ -0.77
CTNND1-221ENST00000529873 FYB1O15117 783 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 GNAI3P08754 354 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 ERC1Q8IUD2 1116 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 LETM1O95202 739 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-221ENST00000529873 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 MTHFSP49914 203 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 FSD1Q9BTV5 496 aa10.22□□□□□ -0.77
CTNND1-221ENST00000529873 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
CTNND1-221ENST00000529873 ERBINQ96RT1 1412 aa10.21□□□□□ -0.77
CTNND1-221ENST00000529873 ESCO1Q5FWF5 840 aa10.21□□□□□ -0.77
CTNND1-221ENST00000529873 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.77
CTNND1-221ENST00000529873 DAPK1P53355 1430 aa10.21□□□□□ -0.78
CTNND1-221ENST00000529873 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms