RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
NUP98-216ENST00000529379 SYMPKQ92797 1274 aaKnown RBP10.4□□□□□ -0.74
NUP98-216ENST00000529379 RFC5P40937 340 aa10.39□□□□□ -0.75
NUP98-216ENST00000529379 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
NUP98-216ENST00000529379 SCUBE3Q8IX30 993 aa10.39□□□□□ -0.75
NUP98-216ENST00000529379 ZBTB3Q9H5J0 574 aa10.39□□□□□ -0.75
NUP98-216ENST00000529379 COPS2P61201 443 aa10.38□□□□□ -0.75
NUP98-216ENST00000529379 MTMR2Q13614 643 aa10.38□□□□□ -0.75
NUP98-216ENST00000529379 NUTM2BA6NNL0 878 aaPredicted RBP10.37□□□□□ -0.75
NUP98-216ENST00000529379 NUTM2EB1AL46 878 aaPredicted RBP10.37□□□□□ -0.75
NUP98-216ENST00000529379 C6orf229H3BNL8 230 aa10.37□□□□□ -0.75
NUP98-216ENST00000529379 NUTM2DQ5VT03 806 aaPredicted RBP10.37□□□□□ -0.75
NUP98-216ENST00000529379 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
NUP98-216ENST00000529379 NUTM2AQ8IVF1 878 aaPredicted RBP10.37□□□□□ -0.75
NUP98-216ENST00000529379 NR1I2O75469 434 aa10.36□□□□□ -0.75
NUP98-216ENST00000529379 MTRQ99707 1265 aa10.36□□□□□ -0.75
NUP98-216ENST00000529379 Q3C1V9 767 aa10.35□□□□□ -0.75
NUP98-216ENST00000529379 BRICD5Q6PL45 260 aa10.35□□□□□ -0.75
NUP98-216ENST00000529379 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
NUP98-216ENST00000529379 ITGBL1O95965 494 aaPredicted RBP10.34□□□□□ -0.75
NUP98-216ENST00000529379 TJAP1Q5JTD0 557 aa10.34□□□□□ -0.75
NUP98-216ENST00000529379 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
NUP98-216ENST00000529379 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
NUP98-216ENST00000529379 SPDYE5A6NIY4 337 aa10.32□□□□□ -0.76
NUP98-216ENST00000529379 FMNL1O95466 1100 aaPredicted RBP10.32□□□□□ -0.76
NUP98-216ENST00000529379 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
NUP98-216ENST00000529379 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
NUP98-216ENST00000529379 ZPR1O75312 459 aa10.31□□□□□ -0.76
NUP98-216ENST00000529379 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
NUP98-216ENST00000529379 TLL1O43897 1013 aa10.3□□□□□ -0.76
NUP98-216ENST00000529379 TMEM259Q4ZIN3 620 aa10.3□□□□□ -0.76
NUP98-216ENST00000529379 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
NUP98-216ENST00000529379 USB1Q9BQ65 265 aaKnown RBP10.3□□□□□ -0.76
NUP98-216ENST00000529379 IL21Q9HBE4 155 aa10.3□□□□□ -0.76
NUP98-216ENST00000529379 AP1G2O75843 785 aa10.29□□□□□ -0.76
NUP98-216ENST00000529379 BANK1Q8NDB2 785 aa10.28□□□□□ -0.76
NUP98-216ENST00000529379 TSC1Q92574 1164 aa10.28□□□□□ -0.76
NUP98-216ENST00000529379 SPSB2Q99619 263 aa10.28□□□□□ -0.76
NUP98-216ENST00000529379 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
NUP98-216ENST00000529379 CTDSPL2Q05D32 466 aa10.27□□□□□ -0.77
NUP98-216ENST00000529379 FAM160A2Q8N612 972 aaPredicted RBP10.27□□□□□ -0.77
NUP98-216ENST00000529379 SNRKQ9NRH2 765 aa10.27□□□□□ -0.77
NUP98-216ENST00000529379 FLIIQ13045 1269 aa10.26□□□□□ -0.77
NUP98-216ENST00000529379 MCM6Q14566 821 aa10.26□□□□□ -0.77
NUP98-216ENST00000529379 ADH1BP00325 375 aa10.25□□□□□ -0.77
NUP98-216ENST00000529379 USP17L8P0C7I0 530 aa10.25□□□□□ -0.77
NUP98-216ENST00000529379 MSS51Q4VC12 460 aa10.25□□□□□ -0.77
NUP98-216ENST00000529379 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
NUP98-216ENST00000529379 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
NUP98-216ENST00000529379 DESI1Q6ICB0 168 aa10.24□□□□□ -0.77
NUP98-216ENST00000529379 PRDM9Q9NQV7 894 aa10.24□□□□□ -0.77
NUP98-216ENST00000529379 PER1O15534 1290 aaPredicted RBP10.23□□□□□ -0.77
NUP98-216ENST00000529379 KCNC4Q03721 635 aa10.23□□□□□ -0.77
NUP98-216ENST00000529379 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
NUP98-216ENST00000529379 A0A0G2JS52 829 aa10.22□□□□□ -0.77
NUP98-216ENST00000529379 JUNDP17535 347 aa10.22□□□□□ -0.77
NUP98-216ENST00000529379 MTMR14Q8NCE2 650 aa10.22□□□□□ -0.77
NUP98-216ENST00000529379 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
NUP98-216ENST00000529379 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
NUP98-216ENST00000529379 DXOO77932 396 aaKnown RBP10.2□□□□□ -0.78
NUP98-216ENST00000529379 MMP16P51512 607 aa10.2□□□□□ -0.78
NUP98-216ENST00000529379 LYPD8Q6UX82 237 aa10.2□□□□□ -0.78
NUP98-216ENST00000529379 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
NUP98-216ENST00000529379 SOCS7O14512 581 aa10.17□□□□□ -0.78
NUP98-216ENST00000529379 S1PR4O95977 384 aa10.17□□□□□ -0.78
NUP98-216ENST00000529379 GJD4Q96KN9 370 aaPredicted RBP10.17□□□□□ -0.78
NUP98-216ENST00000529379 UBTFP17480 764 aaKnown RBP10.16□□□□□ -0.78
NUP98-216ENST00000529379 PTPRNQ16849 979 aa10.16□□□□□ -0.78
NUP98-216ENST00000529379 ERICH6Q7L0X2 663 aa10.16□□□□□ -0.78
NUP98-216ENST00000529379 EPS8L1Q8TE68 723 aa10.16□□□□□ -0.78
NUP98-216ENST00000529379 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
NUP98-216ENST00000529379 CLUAP1Q96AJ1 413 aa10.15□□□□□ -0.78
NUP98-216ENST00000529379 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
NUP98-216ENST00000529379 F12P00748 615 aaPredicted RBP10.14□□□□□ -0.79
NUP98-216ENST00000529379 NR6A1Q15406 480 aa10.14□□□□□ -0.79
NUP98-216ENST00000529379 NUDT12Q9BQG2 462 aa10.14□□□□□ -0.79
NUP98-216ENST00000529379 ZMYND15Q9H091 742 aa10.13□□□□□ -0.79
NUP98-216ENST00000529379 MAP10Q9P2G4 905 aa10.13□□□□□ -0.79
NUP98-216ENST00000529379 COG6Q9Y2V7 657 aa10.13□□□□□ -0.79
NUP98-216ENST00000529379 PPEF1O14829 653 aaPredicted RBP10.12□□□□□ -0.79
NUP98-216ENST00000529379 CCNYL3P0C7X3 344 aa10.12□□□□□ -0.79
NUP98-216ENST00000529379 EVA1BQ9NVM1 165 aa10.12□□□□□ -0.79
NUP98-216ENST00000529379 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
NUP98-216ENST00000529379 APBB1O00213 710 aa10.1□□□□□ -0.79
NUP98-216ENST00000529379 CTHP32929 405 aa10.1□□□□□ -0.79
NUP98-216ENST00000529379 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
NUP98-216ENST00000529379 CCDC24Q8N4L8 307 aa10.1□□□□□ -0.79
NUP98-216ENST00000529379 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
NUP98-216ENST00000529379 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
NUP98-216ENST00000529379 GPR37L1O60883 481 aa10.09□□□□□ -0.79
NUP98-216ENST00000529379 KCNH2Q12809 1159 aa10.09□□□□□ -0.79
NUP98-216ENST00000529379 NDUFB9Q9Y6M9 179 aa10.09□□□□□ -0.79
NUP98-216ENST00000529379 A6NJR5 290 aa10.08□□□□□ -0.8
NUP98-216ENST00000529379 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
NUP98-216ENST00000529379 RAD21O60216 631 aa10.08□□□□□ -0.8
NUP98-216ENST00000529379 PTCRAQ6ISU1 281 aaPredicted RBP10.08□□□□□ -0.8
NUP98-216ENST00000529379 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
NUP98-216ENST00000529379 ABL2P42684 1182 aa10.06□□□□□ -0.8
NUP98-216ENST00000529379 PRM3Q9NNZ6 103 aa10.06□□□□□ -0.8
NUP98-216ENST00000529379 GGCXP38435 758 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms