RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 ATF3P18847 181 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 ANKRD20A12PQ8NF67 263 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 TRDNQ13061 729 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 NFXL1Q6ZNB6 911 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 GSE1Q14687 1217 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 RSPH6AQ9H0K4 717 aa10.32□□□□□ -0.76
CTNND1-219ENST00000528621 CPLX1O14810 134 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 SYTL4Q96C24 671 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-219ENST00000528621 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 SLC4A3P48751 1232 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 CABP2Q9NPB3 220 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 ZNF644Q9H582 1327 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-219ENST00000528621 RAD21O60216 631 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 GPS2Q13227 327 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 ARAP1Q96P48 1450 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 FOXD4L6Q3SYB3 417 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-219ENST00000528621 FOXD4L3Q6VB84 417 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-219ENST00000528621 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
CTNND1-219ENST00000528621 HMOX1P09601 288 aa10.3□□□□□ -0.76
CTNND1-219ENST00000528621 C9orf84Q5VXU9 1444 aa10.3□□□□□ -0.76
CTNND1-219ENST00000528621 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-219ENST00000528621 CDC45O75419 566 aa10.3□□□□□ -0.76
CTNND1-219ENST00000528621 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
CTNND1-219ENST00000528621 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-219ENST00000528621 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-219ENST00000528621 GPRASP1Q5JY77 1395 aa10.3□□□□□ -0.76
CTNND1-219ENST00000528621 TNNT3P45378 269 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-219ENST00000528621 HIP1O00291 1037 aa10.29□□□□□ -0.76
CTNND1-219ENST00000528621 PSMA5P28066 241 aa10.29□□□□□ -0.76
CTNND1-219ENST00000528621 CUL7Q14999 1698 aa10.29□□□□□ -0.76
CTNND1-219ENST00000528621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTNND1-219ENST00000528621 SMC3Q9UQE7 1217 aa10.29□□□□□ -0.76
CTNND1-219ENST00000528621 CCDC30Q5VVM6 783 aa10.29□□□□□ -0.76
CTNND1-219ENST00000528621 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
CTNND1-219ENST00000528621 CT47B1P0C2W7 299 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
CTNND1-219ENST00000528621 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 CNTROBQ8N137 903 aa10.28□□□□□ -0.76
CTNND1-219ENST00000528621 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-219ENST00000528621 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
CTNND1-219ENST00000528621 TROQ12816 1431 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-219ENST00000528621 TOPBP1Q92547 1522 aa10.27□□□□□ -0.77
CTNND1-219ENST00000528621 ERC1Q8IUD2 1116 aa10.27□□□□□ -0.77
CTNND1-219ENST00000528621 GNAI3P08754 354 aa10.27□□□□□ -0.77
CTNND1-219ENST00000528621 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-219ENST00000528621 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
CTNND1-219ENST00000528621 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-219ENST00000528621 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
CTNND1-219ENST00000528621 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
CTNND1-219ENST00000528621 IPO7O95373 1038 aaKnown RBP10.26□□□□□ -0.77
CTNND1-219ENST00000528621 PLEKHO1Q53GL0 409 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-219ENST00000528621 CCAR2Q8N163 923 aaKnown RBP10.26□□□□□ -0.77
CTNND1-219ENST00000528621 PRXQ9BXM0 1461 aa10.26□□□□□ -0.77
CTNND1-219ENST00000528621 CC2D2AQ9P2K1 1620 aa10.26□□□□□ -0.77
CTNND1-219ENST00000528621 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
CTNND1-219ENST00000528621 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CTNND1-219ENST00000528621 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
CTNND1-219ENST00000528621 DAPK1P53355 1430 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 KIF6Q6ZMV9 814 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 GCC1Q96CN9 775 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-219ENST00000528621 XBP1P17861 261 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 MCM2P49736 904 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 NEUROD6Q96NK8 337 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 VPS37CA5D8V6 355 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-219ENST00000528621 PPP2R1AP30153 589 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 PANK1Q8TE04 598 aa10.25□□□□□ -0.77
CTNND1-219ENST00000528621 NAT10Q9H0A0 1025 aaKnown RBP10.25□□□□□ -0.77
CTNND1-219ENST00000528621 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
CTNND1-219ENST00000528621 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 FOSBP53539 338 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 LNPKQ9C0E8 428 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 SNAPC4Q5SXM2 1469 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 CCDC73Q6ZRK6 1079 aa10.24□□□□□ -0.77
CTNND1-219ENST00000528621 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
CTNND1-219ENST00000528621 CCDC141Q6ZP82 1450 aa10.23□□□□□ -0.77
CTNND1-219ENST00000528621 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
CTNND1-219ENST00000528621 CWC22Q9HCG8 908 aaKnown RBP10.23□□□□□ -0.77
CTNND1-219ENST00000528621 PDE3AQ14432 1141 aa10.23□□□□□ -0.77
CTNND1-219ENST00000528621 NLRP6P59044 892 aa10.23□□□□□ -0.77
CTNND1-219ENST00000528621 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-219ENST00000528621 FYB1O15117 783 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 WDR63Q8IWG1 891 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 MTHFSP49914 203 aa10.22□□□□□ -0.77
CTNND1-219ENST00000528621 FSD1Q9BTV5 496 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms