RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.29■■□□□ 1.162e-10■■■■□ 23.7
LTBP3-210ENST00000528516 NECTIN2Q92692 538 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 ANTXR1Q9H6X2 564 aa22.29■■□□□ 1.16
LTBP3-210ENST00000528516 SLFN5Q08AF3 891 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 LNPKQ9C0E8 428 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 TBC1D32Q96NH3 1257 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 PLEKHH2Q8IVE3 1493 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 OS9Q13438 667 aaPredicted RBP22.28■■□□□ 1.16
LTBP3-210ENST00000528516 GBP4Q96PP9 640 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 PLCH2O75038 1416 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
LTBP3-210ENST00000528516 RAPGEF3O95398 923 aa22.27■■□□□ 1.16
LTBP3-210ENST00000528516 PDZRN3Q9UPQ7 1066 aa22.27■■□□□ 1.16
LTBP3-210ENST00000528516 R3HCC1Q9Y3T6 440 aaKnown RBP22.27■■□□□ 1.16
LTBP3-210ENST00000528516 GCC2Q8IWJ2 1684 aa22.27■■□□□ 1.16
LTBP3-210ENST00000528516 IPO8O15397 1037 aaKnown RBP22.27■■□□□ 1.16
LTBP3-210ENST00000528516 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
LTBP3-210ENST00000528516 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
LTBP3-210ENST00000528516 PER1O15534 1290 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-210ENST00000528516 ASXL2Q76L83 1435 aa22.26■■□□□ 1.15
LTBP3-210ENST00000528516 TTC37Q6PGP7 1564 aa22.26■■□□□ 1.15
LTBP3-210ENST00000528516 MBD5Q9P267 1494 aa22.25■■□□□ 1.15
LTBP3-210ENST00000528516 DNTTIP2Q5QJE6 756 aaKnown RBP22.25■■□□□ 1.15
LTBP3-210ENST00000528516 PZPP20742 1482 aa22.25■■□□□ 1.15
LTBP3-210ENST00000528516 RIPK4P57078 832 aa22.24■■□□□ 1.15
LTBP3-210ENST00000528516 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
LTBP3-210ENST00000528516 TERF2IPQ9NYB0 399 aa22.23■■□□□ 1.15
LTBP3-210ENST00000528516 EIF3AQ14152 1382 aaKnown RBP22.22■■□□□ 1.15
LTBP3-210ENST00000528516 FAM69CQ0P6D2 419 aa22.22■■□□□ 1.15
LTBP3-210ENST00000528516 CASC1Q6TDU7 716 aa22.22■■□□□ 1.15
LTBP3-210ENST00000528516 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
LTBP3-210ENST00000528516 SPINK5Q9NQ38 1064 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-210ENST00000528516 NASPP49321 788 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-210ENST00000528516 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.15
LTBP3-210ENST00000528516 RALGAPBQ86X10 1494 aa22.2■■□□□ 1.14
LTBP3-210ENST00000528516 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
LTBP3-210ENST00000528516 FANCAO15360 1455 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 WDR7Q9Y4E6 1490 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-210ENST00000528516 ZNF428Q96B54 188 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 KDM5CP41229 1560 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 SHROOM2Q13796 1616 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 KCNJ4P48050 445 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 C1orf115Q9H7X2 142 aa22.19■■□□□ 1.14
LTBP3-210ENST00000528516 PDE3AQ14432 1141 aa22.18■■□□□ 1.14
LTBP3-210ENST00000528516 NAP1L2Q9ULW6 460 aaPredicted RBP22.18■■□□□ 1.14
LTBP3-210ENST00000528516 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
LTBP3-210ENST00000528516 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
LTBP3-210ENST00000528516 ADCY10Q96PN6 1610 aa22.18■■□□□ 1.14
LTBP3-210ENST00000528516 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
LTBP3-210ENST00000528516 POLR1AO95602 1720 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-210ENST00000528516 DZIP1LQ8IYY4 767 aaKnown RBP22.17■■□□□ 1.14
LTBP3-210ENST00000528516 DDX49Q9Y6V7 483 aaKnown RBP22.17■■□□□ 1.14
LTBP3-210ENST00000528516 PRDM10Q9NQV6 1147 aa22.16■■□□□ 1.14
LTBP3-210ENST00000528516 ISY1Q9ULR0 285 aaKnown RBP22.15■■□□□ 1.14
LTBP3-210ENST00000528516 ZMYM4Q5VZL5 1548 aa22.15■■□□□ 1.14
LTBP3-210ENST00000528516 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
LTBP3-210ENST00000528516 CD109Q6YHK3 1445 aa22.15■■□□□ 1.14
LTBP3-210ENST00000528516 ZSCAN30Q86W11 494 aa22.15■■□□□ 1.14
LTBP3-210ENST00000528516 ADGRL1O94910 1474 aa22.14■■□□□ 1.14
LTBP3-210ENST00000528516 ARHGEF12Q9NZN5 1544 aa22.14■■□□□ 1.14
LTBP3-210ENST00000528516 DISP3Q9P2K9 1392 aa22.14■■□□□ 1.13
LTBP3-210ENST00000528516 EXOSC9Q06265 439 aaKnown RBP22.14■■□□□ 1.13
LTBP3-210ENST00000528516 CCDC173Q0VFZ6 552 aa22.14■■□□□ 1.13
LTBP3-210ENST00000528516 SKOR2Q2VWA4 1001 aaPredicted RBP22.13■■□□□ 1.13
LTBP3-210ENST00000528516 GAS2L3Q86XJ1 694 aa22.13■■□□□ 1.13
LTBP3-210ENST00000528516 RUNDC1Q96C34 613 aa22.13■■□□□ 1.13
LTBP3-210ENST00000528516 TNPO1Q92973 898 aaKnown RBP22.12■■□□□ 1.13
LTBP3-210ENST00000528516 PCDHB15Q9Y5E8 787 aa22.12■■□□□ 1.13
LTBP3-210ENST00000528516 CDC42BPBQ9Y5S2 1711 aa22.12■■□□□ 1.13
LTBP3-210ENST00000528516 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
LTBP3-210ENST00000528516 CALD1Q05682 793 aaKnown RBP22.12■■□□□ 1.13
LTBP3-210ENST00000528516 ZHX1Q9UKY1 873 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-210ENST00000528516 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
LTBP3-210ENST00000528516 SHANK2Q9UPX8 1470 aa22.11■■□□□ 1.13
LTBP3-210ENST00000528516 VGFO15240 615 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-210ENST00000528516 NUTM2GQ5VZR2 741 aa22.1■■□□□ 1.13
LTBP3-210ENST00000528516 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
LTBP3-210ENST00000528516 UQCRHLA0A096LP55 91 aa22.09■■□□□ 1.13
LTBP3-210ENST00000528516 DIAPH1O60610 1272 aaKnown RBP22.09■■□□□ 1.13
LTBP3-210ENST00000528516 UQCRHP07919 91 aa22.09■■□□□ 1.13
LTBP3-210ENST00000528516 FBLN1P23142 703 aa22.09■■□□□ 1.13
LTBP3-210ENST00000528516 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
LTBP3-210ENST00000528516 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
LTBP3-210ENST00000528516 PREX2Q70Z35 1606 aa22.09■■□□□ 1.13
LTBP3-210ENST00000528516 TRHP20396 242 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-210ENST00000528516 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
LTBP3-210ENST00000528516 NGDNQ8NEJ9 315 aaKnown RBP22.08■■□□□ 1.13
LTBP3-210ENST00000528516 MAP7D2Q96T17 732 aa22.08■■□□□ 1.13
LTBP3-210ENST00000528516 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.12
LTBP3-210ENST00000528516 ZNF330Q9Y3S2 320 aaPredicted RBP22.08■■□□□ 1.12
LTBP3-210ENST00000528516 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
LTBP3-210ENST00000528516 FGD1P98174 961 aa22.07■■□□□ 1.12
LTBP3-210ENST00000528516 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
LTBP3-210ENST00000528516 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
LTBP3-210ENST00000528516 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
LTBP3-210ENST00000528516 RILPL2Q969X0 211 aa22.05■■□□□ 1.12
LTBP3-210ENST00000528516 PTMSP20962 102 aa22.05■■□□□ 1.12
LTBP3-210ENST00000528516 UHRF1BP1Q6BDS2 1440 aa22.05■■□□□ 1.12
LTBP3-210ENST00000528516 FAM135AQ9P2D6 1515 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms