RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
RBM39-243ENST00000528062 TBX22Q9Y458 520 aa17.61■□□□□ 0.41
RBM39-243ENST00000528062 NWD1Q149M9 1564 aa17.59■□□□□ 0.41
RBM39-243ENST00000528062 YTHDC2Q9H6S0 1430 aaKnown RBP17.59■□□□□ 0.41
RBM39-243ENST00000528062 POLR3GLQ9BT43 218 aa17.58■□□□□ 0.41
RBM39-243ENST00000528062 SMG6Q86US8 1419 aaKnown RBP17.57■□□□□ 0.4
RBM39-243ENST00000528062 CPS1P31327 1500 aa17.57■□□□□ 0.4
RBM39-243ENST00000528062 TECPR2O15040 1411 aa17.56■□□□□ 0.4
RBM39-243ENST00000528062 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
RBM39-243ENST00000528062 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
RBM39-243ENST00000528062 PIK3R4Q99570 1358 aa17.55■□□□□ 0.4
RBM39-243ENST00000528062 BCL11AQ9H165 835 aa17.54■□□□□ 0.4
RBM39-243ENST00000528062 DLC1Q96QB1 1528 aa17.54■□□□□ 0.4
RBM39-243ENST00000528062 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
RBM39-243ENST00000528062 SENP3-EIF4A1A0A087X0R7 540 aa17.53■□□□□ 0.4
RBM39-243ENST00000528062 STK26Q9P289 416 aa17.53■□□□□ 0.4
RBM39-243ENST00000528062 ROBO2Q9HCK4 1378 aa17.53■□□□□ 0.4
RBM39-243ENST00000528062 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
RBM39-243ENST00000528062 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.4
RBM39-243ENST00000528062 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
RBM39-243ENST00000528062 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
RBM39-243ENST00000528062 AMOTL2Q9Y2J4 779 aa17.51■□□□□ 0.39
RBM39-243ENST00000528062 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
RBM39-243ENST00000528062 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
RBM39-243ENST00000528062 PTCH1Q13635 1447 aa17.51■□□□□ 0.39
RBM39-243ENST00000528062 KCNA6P17658 529 aa17.51■□□□□ 0.39
RBM39-243ENST00000528062 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
RBM39-243ENST00000528062 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.5■□□□□ 0.39
RBM39-243ENST00000528062 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
RBM39-243ENST00000528062 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
RBM39-243ENST00000528062 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
RBM39-243ENST00000528062 NALCNQ8IZF0 1738 aa17.48■□□□□ 0.39
RBM39-243ENST00000528062 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
RBM39-243ENST00000528062 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
RBM39-243ENST00000528062 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
RBM39-243ENST00000528062 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
RBM39-243ENST00000528062 ST20-MTHFSA0A0A6YYL1 179 aa17.46■□□□□ 0.39
RBM39-243ENST00000528062 PRAM1Q96QH2 718 aa17.46■□□□□ 0.38
RBM39-243ENST00000528062 TESK2Q96S53 571 aa17.45■□□□□ 0.38
RBM39-243ENST00000528062 RBM33Q96EV2 1170 aaKnown RBP17.44■□□□□ 0.38
RBM39-243ENST00000528062 TMC1Q8TDI8 760 aa17.43■□□□□ 0.38
RBM39-243ENST00000528062 EIF3AQ14152 1382 aaKnown RBP17.43■□□□□ 0.38
RBM39-243ENST00000528062 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
RBM39-243ENST00000528062 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
RBM39-243ENST00000528062 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
RBM39-243ENST00000528062 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
RBM39-243ENST00000528062 SAFB2Q14151 953 aaKnown RBP eCLIP17.42■□□□□ 0.38
RBM39-243ENST00000528062 ADGRB2O60241 1585 aa17.42■□□□□ 0.38
RBM39-243ENST00000528062 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
RBM39-243ENST00000528062 CCDC136Q96JN2 1154 aa17.4■□□□□ 0.38
RBM39-243ENST00000528062 TMEM94Q12767 1356 aa17.39■□□□□ 0.37
RBM39-243ENST00000528062 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
RBM39-243ENST00000528062 POGKQ9P215 609 aa17.38■□□□□ 0.37
RBM39-243ENST00000528062 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
RBM39-243ENST00000528062 MYBBP1AQ9BQG0 1328 aaKnown RBP17.37■□□□□ 0.37
RBM39-243ENST00000528062 BRD4O60885 1362 aaPredicted RBP17.37■□□□□ 0.37
RBM39-243ENST00000528062 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
RBM39-243ENST00000528062 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
RBM39-243ENST00000528062 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
RBM39-243ENST00000528062 USP32Q8NFA0 1604 aa17.36■□□□□ 0.37
RBM39-243ENST00000528062 FMN2Q9NZ56 1722 aa17.35■□□□□ 0.37
RBM39-243ENST00000528062 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
RBM39-243ENST00000528062 RGPD8O14715 1765 aaPredicted RBP17.35■□□□□ 0.37
RBM39-243ENST00000528062 RALBP1Q15311 655 aa17.34■□□□□ 0.37
RBM39-243ENST00000528062 NOP58Q9Y2X3 529 aaKnown RBP17.34■□□□□ 0.37
RBM39-243ENST00000528062 MYOM1P52179 1685 aa17.33■□□□□ 0.36
RBM39-243ENST00000528062 KTN1Q86UP2 1357 aaKnown RBP17.33■□□□□ 0.36
RBM39-243ENST00000528062 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
RBM39-243ENST00000528062 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
RBM39-243ENST00000528062 ATP7BP35670 1465 aa17.3■□□□□ 0.36
RBM39-243ENST00000528062 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
RBM39-243ENST00000528062 RRP1P56182 461 aaKnown RBP17.29■□□□□ 0.36
RBM39-243ENST00000528062 RTN4Q9NQC3 1192 aaKnown RBP17.29■□□□□ 0.36
RBM39-243ENST00000528062 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
RBM39-243ENST00000528062 SALL2Q9Y467 1007 aaPredicted RBP17.28■□□□□ 0.36
RBM39-243ENST00000528062 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
RBM39-243ENST00000528062 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
RBM39-243ENST00000528062 DCCP43146 1447 aa17.27■□□□□ 0.36
RBM39-243ENST00000528062 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
RBM39-243ENST00000528062 TMF1P82094 1093 aa17.27■□□□□ 0.36
RBM39-243ENST00000528062 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
RBM39-243ENST00000528062 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
RBM39-243ENST00000528062 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
RBM39-243ENST00000528062 EVC2Q86UK5 1308 aa17.27■□□□□ 0.35
RBM39-243ENST00000528062 C19orf44Q9H6X5 657 aa17.26■□□□□ 0.35
RBM39-243ENST00000528062 MST1RQ04912 1400 aa17.25■□□□□ 0.35
RBM39-243ENST00000528062 C14orf37Q86TY3 774 aa17.25■□□□□ 0.35
RBM39-243ENST00000528062 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
RBM39-243ENST00000528062 ITSN1Q15811 1721 aa17.25■□□□□ 0.35
RBM39-243ENST00000528062 MSH6P52701 1360 aa17.24■□□□□ 0.35
RBM39-243ENST00000528062 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
RBM39-243ENST00000528062 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
RBM39-243ENST00000528062 NBR1Q14596 966 aa17.23■□□□□ 0.35
RBM39-243ENST00000528062 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
RBM39-243ENST00000528062 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
RBM39-243ENST00000528062 SRPK2P78362 688 aaKnown RBP17.22■□□□□ 0.35
RBM39-243ENST00000528062 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
RBM39-243ENST00000528062 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
RBM39-243ENST00000528062 C1orf167Q5SNV9 1468 aa17.21■□□□□ 0.35
RBM39-243ENST00000528062 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms