RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PLEKHH1Q9ULM0 1364 aa48.18■■■■■ 5.3
SSSCA1-205ENST00000527920 SPATA31A6Q5VVP1 1343 aa48.18■■■■■ 5.3
SSSCA1-205ENST00000527920 ADGRB1O14514 1584 aa48.17■■■■■ 5.3
SSSCA1-205ENST00000527920 KDM2AQ9Y2K7 1162 aa48.15■■■■■ 5.3
SSSCA1-205ENST00000527920 SHPRHQ149N8 1683 aa48.15■■■■■ 5.3
SSSCA1-205ENST00000527920 DLC1Q96QB1 1528 aa48.13■■■■■ 5.3
SSSCA1-205ENST00000527920 ORAI2Q96SN7 254 aa48.09■■■■■ 5.29
SSSCA1-205ENST00000527920 LRRC59Q96AG4 307 aaKnown RBP48.08■■■■■ 5.29
SSSCA1-205ENST00000527920 SOCS7O14512 581 aa48.07■■■■■ 5.29
SSSCA1-205ENST00000527920 RGS17Q9UGC6 210 aaPredicted RBP48.05■■■■■ 5.28
SSSCA1-205ENST00000527920 DDX17Q92841 729 aaKnown RBP48.02■■■■■ 5.28
SSSCA1-205ENST00000527920 PRAM1Q96QH2 718 aa48.01■■■■■ 5.28
SSSCA1-205ENST00000527920 SOS2Q07890 1332 aaPredicted RBP48■■■■■ 5.27
SSSCA1-205ENST00000527920 LRP6O75581 1613 aa47.99■■■■■ 5.27
SSSCA1-205ENST00000527920 FMN2Q9NZ56 1722 aa47.97■■■■■ 5.27
SSSCA1-205ENST00000527920 ESCO1Q5FWF5 840 aa47.96■■■■■ 5.27
SSSCA1-205ENST00000527920 PNPLA6Q8IY17 1366 aa47.93■■■■■ 5.26
SSSCA1-205ENST00000527920 NPHP3Q7Z494 1330 aa47.93■■■■■ 5.26
SSSCA1-205ENST00000527920 POGKQ9P215 609 aa47.93■■■■■ 5.26
SSSCA1-205ENST00000527920 TRAK1Q9UPV9 953 aa47.91■■■■■ 5.26
SSSCA1-205ENST00000527920 ADGRB2O60241 1585 aa47.88■■■■■ 5.26
SSSCA1-205ENST00000527920 KIAA1210Q9ULL0 1709 aa47.87■■■■■ 5.25
SSSCA1-205ENST00000527920 TRIM26Q12899 539 aaPredicted RBP47.86■■■■■ 5.25
SSSCA1-205ENST00000527920 SAFB2Q14151 953 aaKnown RBP eCLIP47.86■■■■■ 5.25
SSSCA1-205ENST00000527920 NUTM2FA1L443 756 aa47.85■■■■■ 5.25
SSSCA1-205ENST00000527920 MEX3CQ5U5Q3 659 aaKnown RBP47.83■■■■■ 5.25
SSSCA1-205ENST00000527920 PXDNQ92626 1479 aa47.83■■■■■ 5.25
SSSCA1-205ENST00000527920 KIF1AQ12756 1690 aa47.81■■■■■ 5.24
SSSCA1-205ENST00000527920 FOXO3O43524 673 aa47.79■■■■■ 5.24
SSSCA1-205ENST00000527920 POTEAQ6S8J7 498 aa47.79■■■■■ 5.24
SSSCA1-205ENST00000527920 ANKARQ7Z5J8 1434 aa47.79■■■■■ 5.24
SSSCA1-205ENST00000527920 NUTM2BA6NNL0 878 aaPredicted RBP47.78■■■■■ 5.24
SSSCA1-205ENST00000527920 NUTM2EB1AL46 878 aaPredicted RBP47.78■■■■■ 5.24
SSSCA1-205ENST00000527920 NUTM2AQ8IVF1 878 aaPredicted RBP47.78■■■■■ 5.24
SSSCA1-205ENST00000527920 EIF3AQ14152 1382 aaKnown RBP47.74■■■■■ 5.23
SSSCA1-205ENST00000527920 ARHGEF28Q8N1W1 1705 aaKnown RBP47.73■■■■■ 5.23
SSSCA1-205ENST00000527920 L3MBTL2Q969R5 705 aa47.73■■■■■ 5.23
SSSCA1-205ENST00000527920 SIN3AQ96ST3 1273 aa47.73■■■■■ 5.23
SSSCA1-205ENST00000527920 ZNF772Q68DY9 489 aaPredicted RBP47.71■■■■■ 5.23
SSSCA1-205ENST00000527920 PHF8Q9UPP1 1060 aa47.7■■■■■ 5.23
SSSCA1-205ENST00000527920 COL22A1Q8NFW1 1626 aaPredicted RBP47.7■■■■■ 5.23
SSSCA1-205ENST00000527920 MINK1Q8N4C8 1332 aaPredicted RBP47.69■■■■■ 5.22
SSSCA1-205ENST00000527920 HIRIP3Q9BW71 556 aaPredicted RBP47.66■■■■■ 5.22
SSSCA1-205ENST00000527920 USP32Q8NFA0 1604 aa47.64■■■■■ 5.22
SSSCA1-205ENST00000527920 WASLO00401 505 aaPredicted RBP47.64■■■■■ 5.22
SSSCA1-205ENST00000527920 XPCQ01831 940 aaPredicted RBP47.64■■■■■ 5.22
SSSCA1-205ENST00000527920 NBPF1Q3BBV0 1214 aa47.64■■■■■ 5.22
SSSCA1-205ENST00000527920 TULP4Q9NRJ4 1543 aa47.63■■■■■ 5.22
SSSCA1-205ENST00000527920 RGPD8O14715 1765 aaPredicted RBP47.62■■■■■ 5.21
SSSCA1-205ENST00000527920 NEUROD1Q13562 356 aa47.61■■■■■ 5.21
SSSCA1-205ENST00000527920 SPATA31A3Q5VYP0 1347 aa47.58■■■■■ 5.21
SSSCA1-205ENST00000527920 KRT28Q7Z3Y7 464 aa47.57■■■■■ 5.21
SSSCA1-205ENST00000527920 AFF2P51816 1311 aa47.56■■■■■ 5.2
SSSCA1-205ENST00000527920 PSME1Q06323 249 aa47.54■■■■■ 5.2
SSSCA1-205ENST00000527920 PRR36Q9H6K5 1346 aa47.54■■■■■ 5.2
SSSCA1-205ENST00000527920 C8orf37Q96NL8 207 aa47.53■■■■■ 5.2
SSSCA1-205ENST00000527920 SBNO1A3KN83 1393 aa47.51■■■■■ 5.2
SSSCA1-205ENST00000527920 ADAMTS2O95450 1211 aa47.51■■■■■ 5.2
SSSCA1-205ENST00000527920 TNS3Q68CZ2 1445 aa47.49■■■■■ 5.19
SSSCA1-205ENST00000527920 PMFBP1Q8TBY8 1022 aa47.46■■■■■ 5.19
SSSCA1-205ENST00000527920 TRPM1Q7Z4N2 1603 aa47.45■■■■■ 5.19
SSSCA1-205ENST00000527920 ATP7BP35670 1465 aa47.45■■■■■ 5.19
SSSCA1-205ENST00000527920 NGLY1Q96IV0 654 aa47.44■■■■■ 5.18
SSSCA1-205ENST00000527920 CENPJQ9HC77 1338 aaPredicted RBP47.43■■■■■ 5.18
SSSCA1-205ENST00000527920 ARHGEF10O15013 1369 aa47.4■■■■■ 5.18
SSSCA1-205ENST00000527920 NUDT16Q96DE0 195 aaKnown RBP47.39■■■■■ 5.18
SSSCA1-205ENST00000527920 CDK19Q9BWU1 502 aa47.39■■■■■ 5.18
SSSCA1-205ENST00000527920 GPRASP1Q5JY77 1395 aa47.38■■■■■ 5.18
SSSCA1-205ENST00000527920 FNBP4Q8N3X1 1017 aaPredicted RBP47.38■■■■■ 5.18
SSSCA1-205ENST00000527920 ITSN1Q15811 1721 aa47.37■■■■■ 5.17
SSSCA1-205ENST00000527920 RXRBP28702 533 aa47.37■■■■■ 5.17
SSSCA1-205ENST00000527920 ROCK2O75116 1388 aaKnown RBP47.36■■■■■ 5.17
SSSCA1-205ENST00000527920 CDK12Q9NYV4 1490 aaPredicted RBP47.35■■■■■ 5.17
SSSCA1-205ENST00000527920 TONSLQ96HA7 1378 aa47.32■■■■■ 5.17
SSSCA1-205ENST00000527920 TRPM3Q9HCF6 1732 aaPredicted RBP47.31■■■■■ 5.16
SSSCA1-205ENST00000527920 NGDNQ8NEJ9 315 aaKnown RBP47.31■■■■■ 5.16
SSSCA1-205ENST00000527920 QTRT2Q9H974 415 aaKnown RBP47.31■■■■■ 5.16
SSSCA1-205ENST00000527920 CCDC61Q9Y6R9 512 aa47.3■■■■■ 5.16
SSSCA1-205ENST00000527920 MARF1Q9Y4F3 1742 aaKnown RBP47.3■■■■■ 5.16
SSSCA1-205ENST00000527920 NBPF8Q3BBV2 869 aa47.28■■■■■ 5.16
SSSCA1-205ENST00000527920 USP21Q9UK80 565 aa47.28■■■■■ 5.16
SSSCA1-205ENST00000527920 TOPAZ1Q8N9V7 1692 aa47.27■■■■■ 5.16
SSSCA1-205ENST00000527920 QRICH2Q9H0J4 1663 aa47.26■■■■■ 5.16
SSSCA1-205ENST00000527920 RBM6P78332 1123 aaKnown RBP47.25■■■■■ 5.15
SSSCA1-205ENST00000527920 POLR3AO14802 1390 aaPredicted RBP47.24■■■■■ 5.15
SSSCA1-205ENST00000527920 LMOD2Q6P5Q4 547 aa47.23■■■■■ 5.15
SSSCA1-205ENST00000527920 PLEKHG3A1L390 1219 aa47.22■■■■■ 5.15
SSSCA1-205ENST00000527920 TRPC5Q9UL62 973 aaPredicted RBP47.22■■■■■ 5.15
SSSCA1-205ENST00000527920 ALS2Q96Q42 1657 aa47.22■■■■■ 5.15
SSSCA1-205ENST00000527920 BCL9LQ86UU0 1499 aa47.2■■■■■ 5.15
SSSCA1-205ENST00000527920 ATRNO75882 1429 aa47.19■■■■■ 5.14
SSSCA1-205ENST00000527920 SRPK2P78362 688 aaKnown RBP47.18■■■■■ 5.14
SSSCA1-205ENST00000527920 HAP1P54257 671 aaPredicted RBP47.17■■■■■ 5.14
SSSCA1-205ENST00000527920 ABCA3Q99758 1704 aa47.16■■■■■ 5.14
SSSCA1-205ENST00000527920 RALGAPBQ86X10 1494 aa47.16■■■■■ 5.14
SSSCA1-205ENST00000527920 CABLES1Q8TDN4 633 aa47.16■■■■■ 5.14
SSSCA1-205ENST00000527920 SLIT2O94813 1529 aa47.15■■■■■ 5.14
SSSCA1-205ENST00000527920 ACEP12821 1306 aa47.13■■■■■ 5.14
SSSCA1-205ENST00000527920 EVC2Q86UK5 1308 aa47.11■■■■■ 5.13
SSSCA1-205ENST00000527920 CABP2Q9NPB3 220 aa47.11■■■■■ 5.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms