RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 NUTM2EB1AL46 878 aaPredicted RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 RIMBP2O15034 1052 aa6.68□□□□□ -1.34
CHD7-205ENST00000527825 NUTM2DQ5VT03 806 aaPredicted RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 NUTM2AQ8IVF1 878 aaPredicted RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 RBM33Q96EV2 1170 aaKnown RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 PLXNC1O60486 1568 aa6.68□□□□□ -1.34
CHD7-205ENST00000527825 SPAG9O60271 1321 aaKnown RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 CFAP65Q6ZU64 1925 aaKnown RBP6.68□□□□□ -1.34
CHD7-205ENST00000527825 NLRP1Q9C000 1473 aa6.67□□□□□ -1.34
CHD7-205ENST00000527825 CDK12Q9NYV4 1490 aaPredicted RBP6.67□□□□□ -1.34
CHD7-205ENST00000527825 TROQ12816 1431 aaPredicted RBP6.67□□□□□ -1.34
CHD7-205ENST00000527825 KDM5DQ9BY66 1539 aa6.66□□□□□ -1.34
CHD7-205ENST00000527825 INO80Q9ULG1 1556 aaPredicted RBP6.66□□□□□ -1.34
CHD7-205ENST00000527825 SETBP1Q9Y6X0 1596 aa6.66□□□□□ -1.34
CHD7-205ENST00000527825 SHPRHQ149N8 1683 aa6.66□□□□□ -1.34
CHD7-205ENST00000527825 ZNF777Q9ULD5 760 aaPredicted RBP6.66□□□□□ -1.34
CHD7-205ENST00000527825 LRRIQ1Q96JM4 1722 aa6.66□□□□□ -1.34
CHD7-205ENST00000527825 SYCP2Q9BX26 1530 aa6.66□□□□□ -1.34
CHD7-205ENST00000527825 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
CHD7-205ENST00000527825 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
CHD7-205ENST00000527825 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
CHD7-205ENST00000527825 ZSWIM6Q9HCJ5 1215 aa6.65□□□□□ -1.34
CHD7-205ENST00000527825 SPATA31A6Q5VVP1 1343 aa6.65□□□□□ -1.35
CHD7-205ENST00000527825 PZPP20742 1482 aa6.65□□□□□ -1.35
CHD7-205ENST00000527825 C2orf72A6NCS6 295 aa6.64□□□□□ -1.35
CHD7-205ENST00000527825 PPP1R37O75864 691 aa6.64□□□□□ -1.35
CHD7-205ENST00000527825 NKX1-1Q15270 411 aaPredicted RBP6.64□□□□□ -1.35
CHD7-205ENST00000527825 FBXO31Q5XUX0 539 aaPredicted RBP6.64□□□□□ -1.35
CHD7-205ENST00000527825 ERBB3P21860 1342 aa6.64□□□□□ -1.35
CHD7-205ENST00000527825 COL16A1Q07092 1604 aaPredicted RBP6.64□□□□□ -1.35
CHD7-205ENST00000527825 UBR1Q8IWV7 1749 aa6.64□□□□□ -1.35
CHD7-205ENST00000527825 KIF3CO14782 793 aa6.63□□□□□ -1.35
CHD7-205ENST00000527825 LRP6O75581 1613 aa6.63□□□□□ -1.35
CHD7-205ENST00000527825 GPR153Q6NV75 609 aa6.63□□□□□ -1.35
CHD7-205ENST00000527825 ATAD2Q6PL18 1390 aa6.63□□□□□ -1.35
CHD7-205ENST00000527825 LRP5O75197 1615 aa6.62□□□□□ -1.35
CHD7-205ENST00000527825 FMN1Q68DA7 1419 aa6.62□□□□□ -1.35
CHD7-205ENST00000527825 MIA2Q96PC5 1412 aa6.62□□□□□ -1.35
CHD7-205ENST00000527825 MMRN1Q13201 1228 aa6.62□□□□□ -1.35
CHD7-205ENST00000527825 VARS2Q5ST30 1063 aaKnown RBP6.62□□□□□ -1.35
CHD7-205ENST00000527825 BBXQ8WY36 941 aaPredicted RBP6.62□□□□□ -1.35
CHD7-205ENST00000527825 SCAF11Q99590 1463 aaKnown RBP6.61□□□□□ -1.35
CHD7-205ENST00000527825 RGS12O14924 1447 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 FGD6Q6ZV73 1430 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 MSH6P52701 1360 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 TMEM94Q12767 1356 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 WASHC2CQ9Y4E1 1318 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 HNRNPMP52272 730 aaKnown RBP eCLIP6.61□□□□□ -1.351e-6■■■■□ 22.8
CHD7-205ENST00000527825 ARSIQ5FYB1 569 aa6.61□□□□□ -1.35
CHD7-205ENST00000527825 PROSER2Q86WR7 435 aaPredicted RBP6.61□□□□□ -1.35
CHD7-205ENST00000527825 PLEKHH2Q8IVE3 1493 aa6.6□□□□□ -1.35
CHD7-205ENST00000527825 AFF2P51816 1311 aa6.6□□□□□ -1.35
CHD7-205ENST00000527825 IFFO2Q5TF58 517 aa6.6□□□□□ -1.35
CHD7-205ENST00000527825 RYDENQ9NUL5 291 aaKnown RBP6.6□□□□□ -1.35
CHD7-205ENST00000527825 EID1Q9Y6B2 187 aa6.6□□□□□ -1.35
CHD7-205ENST00000527825 TIAM1Q13009 1591 aa6.6□□□□□ -1.35
CHD7-205ENST00000527825 KDM5AP29375 1690 aaKnown RBP6.59□□□□□ -1.35
CHD7-205ENST00000527825 KIF3BO15066 747 aa6.59□□□□□ -1.35
CHD7-205ENST00000527825 RBM6P78332 1123 aaKnown RBP6.59□□□□□ -1.35
CHD7-205ENST00000527825 TMC2Q8TDI7 906 aa6.59□□□□□ -1.35
CHD7-205ENST00000527825 KHSRPQ92945 711 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD7-205ENST00000527825 NGLY1Q96IV0 654 aa6.59□□□□□ -1.35
CHD7-205ENST00000527825 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
CHD7-205ENST00000527825 GTPBP6O43824 516 aaPredicted RBP6.58□□□□□ -1.36
CHD7-205ENST00000527825 TXNDC2Q86VQ3 553 aa6.58□□□□□ -1.36
CHD7-205ENST00000527825 QTRT2Q9H974 415 aaKnown RBP6.58□□□□□ -1.36
CHD7-205ENST00000527825 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.58□□□□□ -1.36
CHD7-205ENST00000527825 MAP3K1Q13233 1512 aa6.58□□□□□ -1.36
CHD7-205ENST00000527825 ABCC3O15438 1527 aa6.57□□□□□ -1.36
CHD7-205ENST00000527825 CEP152O94986 1710 aa6.57□□□□□ -1.36
CHD7-205ENST00000527825 CCDC125Q86Z20 511 aa6.57□□□□□ -1.36
CHD7-205ENST00000527825 CCDC18Q5T9S5 1454 aa6.57□□□□□ -1.36
CHD7-205ENST00000527825 PRDM15P57071 1507 aaPredicted RBP6.56□□□□□ -1.36
CHD7-205ENST00000527825 YY1P25490 414 aa6.56□□□□□ -1.36
CHD7-205ENST00000527825 C14orf37Q86TY3 774 aa6.56□□□□□ -1.36
CHD7-205ENST00000527825 ZNF687Q8N1G0 1237 aa6.56□□□□□ -1.36
CHD7-205ENST00000527825 C8orf37Q96NL8 207 aa6.56□□□□□ -1.36
CHD7-205ENST00000527825 AHDC1Q5TGY3 1603 aaPredicted RBP6.56□□□□□ -1.36
CHD7-205ENST00000527825 SLIT1O75093 1534 aa6.55□□□□□ -1.36
CHD7-205ENST00000527825 NKTRP30414 1462 aaKnown RBP6.55□□□□□ -1.36
CHD7-205ENST00000527825 ZNF316A6NFI3 1004 aaPredicted RBP6.55□□□□□ -1.36
CHD7-205ENST00000527825 KCNA6P17658 529 aa6.55□□□□□ -1.36
CHD7-205ENST00000527825 BCANQ96GW7 911 aa6.55□□□□□ -1.36
CHD7-205ENST00000527825 CFDP1Q9UEE9 299 aaPredicted RBP6.55□□□□□ -1.36
CHD7-205ENST00000527825 KIAA1107Q9UPP5 1409 aa6.55□□□□□ -1.36
CHD7-205ENST00000527825 NWD1Q149M9 1564 aa6.55□□□□□ -1.36
CHD7-205ENST00000527825 DHX29Q7Z478 1369 aaKnown RBP6.55□□□□□ -1.36
CHD7-205ENST00000527825 CHD2O14647 1828 aaKnown RBP6.55□□□□□ -1.36
CHD7-205ENST00000527825 SLC34A2O95436 690 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 NUDT7P0C024 238 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 SPRYD3Q8NCJ5 442 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 PCDHGA4Q9Y5G9 962 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 PIK3C2BO00750 1634 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 SRCAPQ6ZRS2 3230 aa6.54□□□□□ -1.36
CHD7-205ENST00000527825 ERVK-7P63135 1459 aa6.53□□□□□ -1.36
CHD7-205ENST00000527825 ARHGAP23Q9P227 1491 aa6.53□□□□□ -1.36
CHD7-205ENST00000527825 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.53□□□□□ -1.36
CHD7-205ENST00000527825 LTKP29376 864 aa6.53□□□□□ -1.36
CHD7-205ENST00000527825 SF3B2Q13435 895 aaKnown RBP6.53□□□□□ -1.36
CHD7-205ENST00000527825 NHSL1Q5SYE7 1610 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms