RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 AHDC1Q5TGY3 1603 aaPredicted RBP20.71■□□□□ 0.91
NXF1-204ENST00000527064 C1orf167Q5SNV9 1468 aa20.71■□□□□ 0.91
NXF1-204ENST00000527064 PRAM1Q96QH2 718 aa20.71■□□□□ 0.91
NXF1-204ENST00000527064 TONSLQ96HA7 1378 aa20.71■□□□□ 0.91
NXF1-204ENST00000527064 BRINP3Q76B58 766 aa20.7■□□□□ 0.9
NXF1-204ENST00000527064 POGKQ9P215 609 aa20.7■□□□□ 0.9
NXF1-204ENST00000527064 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
NXF1-204ENST00000527064 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
NXF1-204ENST00000527064 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
NXF1-204ENST00000527064 COL16A1Q07092 1604 aaPredicted RBP20.66■□□□□ 0.9
NXF1-204ENST00000527064 FMN2Q9NZ56 1722 aa20.66■□□□□ 0.9
NXF1-204ENST00000527064 NHSL1Q5SYE7 1610 aa20.65■□□□□ 0.9
NXF1-204ENST00000527064 TRPM1Q7Z4N2 1603 aa20.65■□□□□ 0.9
NXF1-204ENST00000527064 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
NXF1-204ENST00000527064 CLSPNQ9HAW4 1339 aa20.64■□□□□ 0.89
NXF1-204ENST00000527064 NBPF1Q3BBV0 1214 aa20.62■□□□□ 0.89
NXF1-204ENST00000527064 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
NXF1-204ENST00000527064 JCADQ9P266 1359 aa20.61■□□□□ 0.89
NXF1-204ENST00000527064 MED1Q15648 1581 aaPredicted RBP20.61■□□□□ 0.89
NXF1-204ENST00000527064 ROCK2O75116 1388 aaKnown RBP20.6■□□□□ 0.89
NXF1-204ENST00000527064 KIF1AQ12756 1690 aa20.59■□□□□ 0.89
NXF1-204ENST00000527064 ESCO1Q5FWF5 840 aa20.59■□□□□ 0.89
NXF1-204ENST00000527064 ORAI2Q96SN7 254 aa20.59■□□□□ 0.89
NXF1-204ENST00000527064 MINK1Q8N4C8 1332 aaPredicted RBP20.58■□□□□ 0.89
NXF1-204ENST00000527064 ANKARQ7Z5J8 1434 aa20.58■□□□□ 0.88
NXF1-204ENST00000527064 SHPRHQ149N8 1683 aa20.57■□□□□ 0.88
NXF1-204ENST00000527064 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
NXF1-204ENST00000527064 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
NXF1-204ENST00000527064 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
NXF1-204ENST00000527064 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
NXF1-204ENST00000527064 TULP4Q9NRJ4 1543 aa20.55■□□□□ 0.88
NXF1-204ENST00000527064 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
NXF1-204ENST00000527064 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
NXF1-204ENST00000527064 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
NXF1-204ENST00000527064 WASLO00401 505 aaPredicted RBP20.54■□□□□ 0.88
NXF1-204ENST00000527064 NBPF8Q3BBV2 869 aa20.54■□□□□ 0.88
NXF1-204ENST00000527064 LRRC59Q96AG4 307 aaKnown RBP20.54■□□□□ 0.88
NXF1-204ENST00000527064 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
NXF1-204ENST00000527064 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
NXF1-204ENST00000527064 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.88
NXF1-204ENST00000527064 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
NXF1-204ENST00000527064 DDX17Q92841 729 aaKnown RBP20.52■□□□□ 0.88
NXF1-204ENST00000527064 USP32Q8NFA0 1604 aa20.52■□□□□ 0.88
NXF1-204ENST00000527064 TIMELESSQ9UNS1 1208 aa20.51■□□□□ 0.87
NXF1-204ENST00000527064 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
NXF1-204ENST00000527064 PXDNQ92626 1479 aa20.5■□□□□ 0.87
NXF1-204ENST00000527064 RGPD8O14715 1765 aaPredicted RBP20.49■□□□□ 0.87
NXF1-204ENST00000527064 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
NXF1-204ENST00000527064 ITSN1Q15811 1721 aa20.49■□□□□ 0.87
NXF1-204ENST00000527064 FOXO3O43524 673 aa20.48■□□□□ 0.87
NXF1-204ENST00000527064 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
NXF1-204ENST00000527064 ATP7BP35670 1465 aa20.47■□□□□ 0.87
NXF1-204ENST00000527064 PNPLA6Q8IY17 1366 aa20.46■□□□□ 0.87
NXF1-204ENST00000527064 CDK19Q9BWU1 502 aa20.45■□□□□ 0.86
NXF1-204ENST00000527064 PRR36Q9H6K5 1346 aa20.45■□□□□ 0.86
NXF1-204ENST00000527064 PSME1Q06323 249 aa20.43■□□□□ 0.86
NXF1-204ENST00000527064 NUDT16Q96DE0 195 aaKnown RBP20.43■□□□□ 0.86
NXF1-204ENST00000527064 LRP6O75581 1613 aa20.42■□□□□ 0.86
NXF1-204ENST00000527064 COL22A1Q8NFW1 1626 aaPredicted RBP20.42■□□□□ 0.86
NXF1-204ENST00000527064 TOPAZ1Q8N9V7 1692 aa20.42■□□□□ 0.86
NXF1-204ENST00000527064 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
NXF1-204ENST00000527064 XPCQ01831 940 aaPredicted RBP20.42■□□□□ 0.86
NXF1-204ENST00000527064 MEX3CQ5U5Q3 659 aaKnown RBP20.42■□□□□ 0.86
NXF1-204ENST00000527064 KRT28Q7Z3Y7 464 aa20.41■□□□□ 0.86
NXF1-204ENST00000527064 PMFBP1Q8TBY8 1022 aa20.41■□□□□ 0.86
NXF1-204ENST00000527064 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
NXF1-204ENST00000527064 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
NXF1-204ENST00000527064 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
NXF1-204ENST00000527064 TNS3Q68CZ2 1445 aa20.4■□□□□ 0.86
NXF1-204ENST00000527064 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.85
NXF1-204ENST00000527064 NUTM2EB1AL46 878 aaPredicted RBP20.39■□□□□ 0.85
NXF1-204ENST00000527064 NUTM2AQ8IVF1 878 aaPredicted RBP20.39■□□□□ 0.85
NXF1-204ENST00000527064 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
NXF1-204ENST00000527064 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
NXF1-204ENST00000527064 SPATA31A3Q5VYP0 1347 aa20.38■□□□□ 0.85
NXF1-204ENST00000527064 ARHGEF10O15013 1369 aa20.36■□□□□ 0.85
NXF1-204ENST00000527064 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
NXF1-204ENST00000527064 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
NXF1-204ENST00000527064 TRPM3Q9HCF6 1732 aaPredicted RBP20.35■□□□□ 0.85
NXF1-204ENST00000527064 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
NXF1-204ENST00000527064 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
NXF1-204ENST00000527064 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.84
NXF1-204ENST00000527064 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
NXF1-204ENST00000527064 ACEP12821 1306 aa20.31■□□□□ 0.84
NXF1-204ENST00000527064 USP47Q96K76 1375 aa20.31■□□□□ 0.84
NXF1-204ENST00000527064 ALS2Q96Q42 1657 aa20.3■□□□□ 0.84
NXF1-204ENST00000527064 LMOD2Q6P5Q4 547 aa20.3■□□□□ 0.84
NXF1-204ENST00000527064 ADAMTS2O95450 1211 aa20.29■□□□□ 0.84
NXF1-204ENST00000527064 ZNF772Q68DY9 489 aaPredicted RBP20.29■□□□□ 0.84
NXF1-204ENST00000527064 C8orf37Q96NL8 207 aa20.29■□□□□ 0.84
NXF1-204ENST00000527064 RGS17Q9UGC6 210 aaPredicted RBP20.29■□□□□ 0.84
NXF1-204ENST00000527064 PAK3O75914 559 aaPredicted RBP20.28■□□□□ 0.84
NXF1-204ENST00000527064 BRD4O60885 1362 aaPredicted RBP20.27■□□□□ 0.84
NXF1-204ENST00000527064 ST20-MTHFSA0A0A6YYL1 179 aa20.27■□□□□ 0.84
NXF1-204ENST00000527064 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
NXF1-204ENST00000527064 ILDR2Q71H61 639 aa20.26■□□□□ 0.83
NXF1-204ENST00000527064 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
NXF1-204ENST00000527064 ABCA3Q99758 1704 aa20.26■□□□□ 0.83
NXF1-204ENST00000527064 MARF1Q9Y4F3 1742 aaKnown RBP20.26■□□□□ 0.83
NXF1-204ENST00000527064 AFF2P51816 1311 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms