RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 SIN3AQ96ST3 1273 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
CCDC90B-208ENST00000527025 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
CCDC90B-208ENST00000527025 PRAG1Q86YV5 1406 aa12.98□□□□□ -0.33
CCDC90B-208ENST00000527025 STK26Q9P289 416 aa12.98□□□□□ -0.33
CCDC90B-208ENST00000527025 WAPLQ7Z5K2 1190 aa12.97□□□□□ -0.33
CCDC90B-208ENST00000527025 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
CCDC90B-208ENST00000527025 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
CCDC90B-208ENST00000527025 PTCH1Q13635 1447 aa12.96□□□□□ -0.33
CCDC90B-208ENST00000527025 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
CCDC90B-208ENST00000527025 LRPPRCP42704 1394 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 ZBTB12Q9Y330 459 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 TECPR2O15040 1411 aa12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
CCDC90B-208ENST00000527025 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
CCDC90B-208ENST00000527025 MST1RQ04912 1400 aa12.94□□□□□ -0.34
CCDC90B-208ENST00000527025 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
CCDC90B-208ENST00000527025 ATF3P18847 181 aa12.93□□□□□ -0.34
CCDC90B-208ENST00000527025 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
CCDC90B-208ENST00000527025 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
CCDC90B-208ENST00000527025 LAMC1P11047 1609 aa12.91□□□□□ -0.34
CCDC90B-208ENST00000527025 DCCP43146 1447 aa12.91□□□□□ -0.34
CCDC90B-208ENST00000527025 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
CCDC90B-208ENST00000527025 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
CCDC90B-208ENST00000527025 L3MBTL2Q969R5 705 aa12.91□□□□□ -0.34
CCDC90B-208ENST00000527025 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-208ENST00000527025 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-208ENST00000527025 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
CCDC90B-208ENST00000527025 NBPF1Q3BBV0 1214 aa12.89□□□□□ -0.35
CCDC90B-208ENST00000527025 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
CCDC90B-208ENST00000527025 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
CCDC90B-208ENST00000527025 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
CCDC90B-208ENST00000527025 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
CCDC90B-208ENST00000527025 STAC3Q96MF2 364 aa12.87□□□□□ -0.35
CCDC90B-208ENST00000527025 PRAM1Q96QH2 718 aa12.87□□□□□ -0.35
CCDC90B-208ENST00000527025 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
CCDC90B-208ENST00000527025 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC90B-208ENST00000527025 AHDC1Q5TGY3 1603 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-208ENST00000527025 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-208ENST00000527025 MED1Q15648 1581 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-208ENST00000527025 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
CCDC90B-208ENST00000527025 NHSL1Q5SYE7 1610 aa12.85□□□□□ -0.35
CCDC90B-208ENST00000527025 DLC1Q96QB1 1528 aa12.85□□□□□ -0.35
CCDC90B-208ENST00000527025 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
CCDC90B-208ENST00000527025 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
CCDC90B-208ENST00000527025 DISP3Q9P2K9 1392 aa12.84□□□□□ -0.35
CCDC90B-208ENST00000527025 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
CCDC90B-208ENST00000527025 FMN2Q9NZ56 1722 aa12.84□□□□□ -0.35
CCDC90B-208ENST00000527025 ARHGEF28Q8N1W1 1705 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-208ENST00000527025 ILDR2Q71H61 639 aa12.83□□□□□ -0.36
CCDC90B-208ENST00000527025 HIRIP3Q9BW71 556 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-208ENST00000527025 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
CCDC90B-208ENST00000527025 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CCDC90B-208ENST00000527025 POGKQ9P215 609 aa12.81□□□□□ -0.36
CCDC90B-208ENST00000527025 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-208ENST00000527025 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
CCDC90B-208ENST00000527025 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
CCDC90B-208ENST00000527025 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-208ENST00000527025 LRP6O75581 1613 aa12.79□□□□□ -0.36
CCDC90B-208ENST00000527025 SOS2Q07890 1332 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-208ENST00000527025 PRR36Q9H6K5 1346 aa12.79□□□□□ -0.36
CCDC90B-208ENST00000527025 JCADQ9P266 1359 aa12.79□□□□□ -0.36
CCDC90B-208ENST00000527025 ADGRB2O60241 1585 aa12.78□□□□□ -0.36
CCDC90B-208ENST00000527025 SHPRHQ149N8 1683 aa12.78□□□□□ -0.36
CCDC90B-208ENST00000527025 PITPNM1O00562 1244 aa12.78□□□□□ -0.36
CCDC90B-208ENST00000527025 FOXO3O43524 673 aa12.78□□□□□ -0.36
CCDC90B-208ENST00000527025 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-208ENST00000527025 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
CCDC90B-208ENST00000527025 PXDNQ92626 1479 aa12.77□□□□□ -0.37
CCDC90B-208ENST00000527025 WASLO00401 505 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-208ENST00000527025 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-208ENST00000527025 PNPLA6Q8IY17 1366 aa12.74□□□□□ -0.37
CCDC90B-208ENST00000527025 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-208ENST00000527025 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
CCDC90B-208ENST00000527025 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
CCDC90B-208ENST00000527025 CDK19Q9BWU1 502 aa12.73□□□□□ -0.37
CCDC90B-208ENST00000527025 PHF8Q9UPP1 1060 aa12.73□□□□□ -0.37
CCDC90B-208ENST00000527025 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
CCDC90B-208ENST00000527025 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-208ENST00000527025 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-208ENST00000527025 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
CCDC90B-208ENST00000527025 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
CCDC90B-208ENST00000527025 ANKARQ7Z5J8 1434 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 ROCK2O75116 1388 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 KIF1AQ12756 1690 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 QRICH2Q9H0J4 1663 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 NPHP3Q7Z494 1330 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 KRT28Q7Z3Y7 464 aa12.71□□□□□ -0.37
CCDC90B-208ENST00000527025 ATP7BP35670 1465 aa12.71□□□□□ -0.38
CCDC90B-208ENST00000527025 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-208ENST00000527025 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
CCDC90B-208ENST00000527025 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-208ENST00000527025 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms