RNA–Protein interactions for RNA: ENST00000526927.5

LTBP3-207, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-207ENST00000526927 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
LTBP3-207ENST00000526927 ZFYVE9O95405 1425 aa23.29■■□□□ 1.32
LTBP3-207ENST00000526927 PLEKHH1Q9ULM0 1364 aa23.28■■□□□ 1.32
LTBP3-207ENST00000526927 PTPRMP28827 1452 aa23.27■■□□□ 1.31
LTBP3-207ENST00000526927 TNRQ92752 1358 aa23.26■■□□□ 1.31
LTBP3-207ENST00000526927 NUDCQ9Y266 331 aa23.26■■□□□ 1.31
LTBP3-207ENST00000526927 MSH5O43196 834 aa23.25■■□□□ 1.31
LTBP3-207ENST00000526927 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
LTBP3-207ENST00000526927 WDR43Q15061 677 aaKnown RBP eCLIP23.24■■□□□ 1.31
LTBP3-207ENST00000526927 METP08581 1390 aa23.23■■□□□ 1.31
LTBP3-207ENST00000526927 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
LTBP3-207ENST00000526927 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
LTBP3-207ENST00000526927 CDK19Q9BWU1 502 aa23.21■■□□□ 1.31
LTBP3-207ENST00000526927 SMG6Q86US8 1419 aaKnown RBP23.21■■□□□ 1.31
LTBP3-207ENST00000526927 NCKAP5LQ9HCH0 1330 aa23.19■■□□□ 1.3
LTBP3-207ENST00000526927 LTKP29376 864 aa23.19■■□□□ 1.3
LTBP3-207ENST00000526927 GGNBP2Q9H3C7 697 aa23.18■■□□□ 1.3
LTBP3-207ENST00000526927 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
LTBP3-207ENST00000526927 CABP1Q9NZU7 370 aa23.17■■□□□ 1.3
LTBP3-207ENST00000526927 A0A1W2PP64 1363 aa23.16■■□□□ 1.3
LTBP3-207ENST00000526927 NUTM2FA1L443 756 aa23.16■■□□□ 1.3
LTBP3-207ENST00000526927 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.3
LTBP3-207ENST00000526927 FBLN1P23142 703 aa23.14■■□□□ 1.3
LTBP3-207ENST00000526927 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
LTBP3-207ENST00000526927 BLMP54132 1417 aaPredicted RBP23.14■■□□□ 1.29
LTBP3-207ENST00000526927 B4GALNT3Q6L9W6 998 aa23.13■■□□□ 1.29
LTBP3-207ENST00000526927 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
LTBP3-207ENST00000526927 MTHFSP49914 203 aa23.12■■□□□ 1.29
LTBP3-207ENST00000526927 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.12■■□□□ 1.29
LTBP3-207ENST00000526927 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
LTBP3-207ENST00000526927 TMEM2Q9UHN6 1383 aa23.12■■□□□ 1.29
LTBP3-207ENST00000526927 SETD1AO15047 1707 aaKnown RBP23.12■■□□□ 1.29
LTBP3-207ENST00000526927 APAF1O14727 1248 aa23.11■■□□□ 1.29
LTBP3-207ENST00000526927 UBR1Q8IWV7 1749 aa23.1■■□□□ 1.29
LTBP3-207ENST00000526927 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
LTBP3-207ENST00000526927 NEUROD2Q15784 382 aa23.08■■□□□ 1.29
LTBP3-207ENST00000526927 C3P01024 1663 aa23.08■■□□□ 1.28
LTBP3-207ENST00000526927 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
LTBP3-207ENST00000526927 PLIN1O60240 522 aa23.06■■□□□ 1.28
LTBP3-207ENST00000526927 CD163L1Q9NR16 1453 aa23.06■■□□□ 1.28
LTBP3-207ENST00000526927 FER1L4A9Z1Z3 1794 aa23.05■■□□□ 1.28
LTBP3-207ENST00000526927 FYB1O15117 783 aa23.05■■□□□ 1.28
LTBP3-207ENST00000526927 DMRT2Q9Y5R5 561 aa23.05■■□□□ 1.28
LTBP3-207ENST00000526927 SPINK5Q9NQ38 1064 aaPredicted RBP23.04■■□□□ 1.28
LTBP3-207ENST00000526927 ZRANB1Q9UGI0 708 aa23.03■■□□□ 1.28
LTBP3-207ENST00000526927 RCAN3Q9UKA8 241 aa23.03■■□□□ 1.28
LTBP3-207ENST00000526927 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
LTBP3-207ENST00000526927 ROBO2Q9HCK4 1378 aa23.03■■□□□ 1.28
LTBP3-207ENST00000526927 TERF2IPQ9NYB0 399 aa23.02■■□□□ 1.28
LTBP3-207ENST00000526927 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
LTBP3-207ENST00000526927 HDGFP51858 240 aaKnown RBP23.01■■□□□ 1.27
LTBP3-207ENST00000526927 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
LTBP3-207ENST00000526927 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
LTBP3-207ENST00000526927 PPM1GO15355 546 aaPredicted RBP23■■□□□ 1.27
LTBP3-207ENST00000526927 PUS7Q96PZ0 661 aaKnown RBP23■■□□□ 1.27
LTBP3-207ENST00000526927 HDGFL2Q7Z4V5 671 aaPredicted RBP23■■□□□ 1.27
LTBP3-207ENST00000526927 PPP4R2Q9NY27 417 aa22.99■■□□□ 1.27
LTBP3-207ENST00000526927 NUDT16Q96DE0 195 aaKnown RBP22.97■■□□□ 1.27
LTBP3-207ENST00000526927 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
LTBP3-207ENST00000526927 RBM33Q96EV2 1170 aaKnown RBP22.97■■□□□ 1.27
LTBP3-207ENST00000526927 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
LTBP3-207ENST00000526927 RNF123Q5XPI4 1314 aa22.96■■□□□ 1.27
LTBP3-207ENST00000526927 RRP1P56182 461 aaKnown RBP22.96■■□□□ 1.27
LTBP3-207ENST00000526927 PRR36Q9H6K5 1346 aa22.95■■□□□ 1.27
LTBP3-207ENST00000526927 U2SURPO15042 1029 aaKnown RBP22.95■■□□□ 1.27
LTBP3-207ENST00000526927 PDE3BQ13370 1112 aa22.95■■□□□ 1.27
LTBP3-207ENST00000526927 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
LTBP3-207ENST00000526927 U2AF1L5P0DN76 240 aaPredicted RBP22.95■■□□□ 1.26
LTBP3-207ENST00000526927 U2AF1Q01081 240 aaKnown RBP eCLIP22.95■■□□□ 1.26
LTBP3-207ENST00000526927 NME9Q86XW9 330 aa22.95■■□□□ 1.26
LTBP3-207ENST00000526927 SHPRHQ149N8 1683 aa22.95■■□□□ 1.26
LTBP3-207ENST00000526927 PPIP5K1Q6PFW1 1433 aa22.94■■□□□ 1.26
LTBP3-207ENST00000526927 DLC1Q96QB1 1528 aa22.94■■□□□ 1.26
LTBP3-207ENST00000526927 EXOC6Q8TAG9 804 aa22.94■■□□□ 1.26
LTBP3-207ENST00000526927 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 DUSP27Q5VZP5 1158 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 AMOTL2Q9Y2J4 779 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 GOLGA2Q08379 1002 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 ERICH6Q7L0X2 663 aa22.93■■□□□ 1.26
LTBP3-207ENST00000526927 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
LTBP3-207ENST00000526927 PLEKHG1Q9ULL1 1385 aa22.91■■□□□ 1.26
LTBP3-207ENST00000526927 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
LTBP3-207ENST00000526927 RIMS1Q86UR5 1692 aaKnown RBP22.91■■□□□ 1.26
LTBP3-207ENST00000526927 TCP11L2Q8N4U5 519 aa22.9■■□□□ 1.26
LTBP3-207ENST00000526927 NINLQ9Y2I6 1382 aa22.9■■□□□ 1.26
LTBP3-207ENST00000526927 C20orf194Q5TEA3 1177 aa22.89■■□□□ 1.25
LTBP3-207ENST00000526927 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
LTBP3-207ENST00000526927 DNAJC5Q9H3Z4 198 aa22.89■■□□□ 1.25
LTBP3-207ENST00000526927 INSRP06213 1382 aa22.89■■□□□ 1.25
LTBP3-207ENST00000526927 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
LTBP3-207ENST00000526927 SOX12O15370 315 aa22.87■■□□□ 1.25
LTBP3-207ENST00000526927 SLFN5Q08AF3 891 aa22.87■■□□□ 1.25
LTBP3-207ENST00000526927 PMFBP1Q8TBY8 1022 aa22.87■■□□□ 1.25
LTBP3-207ENST00000526927 CCDC61Q9Y6R9 512 aa22.87■■□□□ 1.25
LTBP3-207ENST00000526927 EMILIN1Q9Y6C2 1016 aa22.86■■□□□ 1.25
LTBP3-207ENST00000526927 NSD2O96028 1365 aa22.86■■□□□ 1.25
LTBP3-207ENST00000526927 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
LTBP3-207ENST00000526927 WWC1Q8IX03 1113 aa22.85■■□□□ 1.25
LTBP3-207ENST00000526927 RRS1Q15050 365 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms