RNA–Protein interactions for RNA: ENST00000526215.5

PUM1-218, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-218ENST00000526215 DPYSL4O14531 572 aa10.55□□□□□ -0.72
PUM1-218ENST00000526215 CFDP1Q9UEE9 299 aaPredicted RBP10.55□□□□□ -0.72
PUM1-218ENST00000526215 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
PUM1-218ENST00000526215 PREX2Q70Z35 1606 aa10.55□□□□□ -0.72
PUM1-218ENST00000526215 MROH2AA6NES4 1674 aa10.54□□□□□ -0.72
PUM1-218ENST00000526215 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
PUM1-218ENST00000526215 NUDT7P0C024 238 aa10.54□□□□□ -0.72
PUM1-218ENST00000526215 KIAA1107Q9UPP5 1409 aa10.54□□□□□ -0.72
PUM1-218ENST00000526215 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
PUM1-218ENST00000526215 ITSN2Q9NZM3 1697 aa10.53□□□□□ -0.72
PUM1-218ENST00000526215 SAMD9LQ8IVG5 1584 aa10.53□□□□□ -0.72
PUM1-218ENST00000526215 EVI5O60447 810 aa10.53□□□□□ -0.72
PUM1-218ENST00000526215 EMP3P54852 163 aa10.53□□□□□ -0.72
PUM1-218ENST00000526215 A2MP01023 1474 aa10.53□□□□□ -0.72
PUM1-218ENST00000526215 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
PUM1-218ENST00000526215 MYT1Q01538 1121 aa10.52□□□□□ -0.73
PUM1-218ENST00000526215 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
PUM1-218ENST00000526215 PLEKHH2Q8IVE3 1493 aa10.52□□□□□ -0.73
PUM1-218ENST00000526215 PSDA5PKW4 1024 aaPredicted RBP10.51□□□□□ -0.73
PUM1-218ENST00000526215 PDIA6Q15084 440 aa10.51□□□□□ -0.73
PUM1-218ENST00000526215 KHSRPQ92945 711 aaKnown RBP eCLIP10.51□□□□□ -0.737e-8■■□□□ 14.5
PUM1-218ENST00000526215 LRRIQ1Q96JM4 1722 aa10.5□□□□□ -0.73
PUM1-218ENST00000526215 ANKLE2Q86XL3 938 aa10.5□□□□□ -0.73
PUM1-218ENST00000526215 ANO8Q9HCE9 1232 aaPredicted RBP10.5□□□□□ -0.73
PUM1-218ENST00000526215 CCNB3Q8WWL7 1395 aa10.5□□□□□ -0.73
PUM1-218ENST00000526215 A2ML1A8K2U0 1454 aa10.49□□□□□ -0.73
PUM1-218ENST00000526215 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
PUM1-218ENST00000526215 THEMISQ8N1K5 641 aaPredicted RBP10.49□□□□□ -0.73
PUM1-218ENST00000526215 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
PUM1-218ENST00000526215 ERBB3P21860 1342 aa10.49□□□□□ -0.73
PUM1-218ENST00000526215 CDC42BPAQ5VT25 1732 aa10.49□□□□□ -0.73
PUM1-218ENST00000526215 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
PUM1-218ENST00000526215 ATP7AQ04656 1500 aa10.48□□□□□ -0.73
PUM1-218ENST00000526215 SYCP2Q9BX26 1530 aa10.48□□□□□ -0.73
PUM1-218ENST00000526215 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
PUM1-218ENST00000526215 CLTCQ00610 1675 aaKnown RBP10.48□□□□□ -0.73
PUM1-218ENST00000526215 SHANK2Q9UPX8 1470 aa10.48□□□□□ -0.73
PUM1-218ENST00000526215 CPS1P31327 1500 aa10.48□□□□□ -0.73
PUM1-218ENST00000526215 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
PUM1-218ENST00000526215 ZNF142P52746 1687 aaPredicted RBP10.47□□□□□ -0.73
PUM1-218ENST00000526215 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
PUM1-218ENST00000526215 DHX29Q7Z478 1369 aaKnown RBP10.47□□□□□ -0.73
PUM1-218ENST00000526215 PLXNC1O60486 1568 aa10.47□□□□□ -0.73
PUM1-218ENST00000526215 MYO3AQ8NEV4 1616 aa10.47□□□□□ -0.73
PUM1-218ENST00000526215 KIF3BO15066 747 aa10.46□□□□□ -0.73
PUM1-218ENST00000526215 RSPH4AQ5TD94 716 aa10.46□□□□□ -0.73
PUM1-218ENST00000526215 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
PUM1-218ENST00000526215 TNRQ92752 1358 aa10.46□□□□□ -0.74
PUM1-218ENST00000526215 FYCO1Q9BQS8 1478 aa10.46□□□□□ -0.74
PUM1-218ENST00000526215 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
PUM1-218ENST00000526215 RTEL1-TNFRSF6BF6WH68 1400 aa10.45□□□□□ -0.74
PUM1-218ENST00000526215 ZNF644Q9H582 1327 aaPredicted RBP10.45□□□□□ -0.74
PUM1-218ENST00000526215 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
PUM1-218ENST00000526215 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
PUM1-218ENST00000526215 PTGER2P43116 358 aa10.44□□□□□ -0.74
PUM1-218ENST00000526215 TRIM52Q96A61 297 aa10.44□□□□□ -0.74
PUM1-218ENST00000526215 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
PUM1-218ENST00000526215 MTUS2Q5JR59 1369 aa10.43□□□□□ -0.74
PUM1-218ENST00000526215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.43□□□□□ -0.74
PUM1-218ENST00000526215 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 SENP3-EIF4A1A0A087X0R7 540 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 POTEMA6NI47 508 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 YY1P25490 414 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 VARS2Q5ST30 1063 aaKnown RBP10.42□□□□□ -0.74
PUM1-218ENST00000526215 POTEGQ6S5H5 508 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
PUM1-218ENST00000526215 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
PUM1-218ENST00000526215 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
PUM1-218ENST00000526215 MED14O60244 1454 aa10.41□□□□□ -0.74
PUM1-218ENST00000526215 PZPP20742 1482 aa10.41□□□□□ -0.74
PUM1-218ENST00000526215 NPHP4O75161 1426 aaPredicted RBP10.41□□□□□ -0.74
PUM1-218ENST00000526215 PHF14O94880 888 aa10.4□□□□□ -0.74
PUM1-218ENST00000526215 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
PUM1-218ENST00000526215 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
PUM1-218ENST00000526215 FAM135AQ9P2D6 1515 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 TSPY4P0CV99 314 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 TSPY10P0CW01 314 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 FOSBP53539 338 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 NBR1Q14596 966 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 EPAS1Q99814 870 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 NEURL4Q96JN8 1562 aa10.39□□□□□ -0.75
PUM1-218ENST00000526215 DDX12PQ92771 950 aa10.38□□□□□ -0.75
PUM1-218ENST00000526215 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
PUM1-218ENST00000526215 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
PUM1-218ENST00000526215 SMYD5Q6GMV2 418 aa10.37□□□□□ -0.75
PUM1-218ENST00000526215 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
PUM1-218ENST00000526215 UGGT1Q9NYU2 1555 aa10.37□□□□□ -0.75
PUM1-218ENST00000526215 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
PUM1-218ENST00000526215 KDM5DQ9BY66 1539 aa10.37□□□□□ -0.75
PUM1-218ENST00000526215 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
PUM1-218ENST00000526215 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
PUM1-218ENST00000526215 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
PUM1-218ENST00000526215 ZNF687Q8N1G0 1237 aa10.36□□□□□ -0.75
PUM1-218ENST00000526215 PCDHGA10Q9Y5H3 936 aa10.36□□□□□ -0.75
PUM1-218ENST00000526215 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
PUM1-218ENST00000526215 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
PUM1-218ENST00000526215 LRRC7Q96NW7 1537 aa10.35□□□□□ -0.75
PUM1-218ENST00000526215 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
PUM1-218ENST00000526215 SEMA3EO15041 775 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms