RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 TIE1P35590 1138 aa11.76□□□□□ -0.53
CLNS1A-205ENST00000526009 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
CLNS1A-205ENST00000526009 KANK1Q14678 1352 aa11.76□□□□□ -0.53
CLNS1A-205ENST00000526009 ERBINQ96RT1 1412 aa11.76□□□□□ -0.53
CLNS1A-205ENST00000526009 EFCAB6Q5THR3 1501 aa11.76□□□□□ -0.53
CLNS1A-205ENST00000526009 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
CLNS1A-205ENST00000526009 UPF1Q92900 1129 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLNS1A-205ENST00000526009 TET3O43151 1660 aa11.75□□□□□ -0.53
CLNS1A-205ENST00000526009 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 NKTRP30414 1462 aaKnown RBP11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
CLNS1A-205ENST00000526009 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
CLNS1A-205ENST00000526009 MEX3CQ5U5Q3 659 aaKnown RBP11.73□□□□□ -0.53
CLNS1A-205ENST00000526009 SPATA31A6Q5VVP1 1343 aa11.73□□□□□ -0.53
CLNS1A-205ENST00000526009 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
CLNS1A-205ENST00000526009 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
CLNS1A-205ENST00000526009 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
CLNS1A-205ENST00000526009 PHLPP1O60346 1717 aa11.72□□□□□ -0.53
CLNS1A-205ENST00000526009 KDM5AP29375 1690 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-205ENST00000526009 ABCC5O15440 1437 aa11.71□□□□□ -0.53
CLNS1A-205ENST00000526009 HDGFP51858 240 aaKnown RBP11.71□□□□□ -0.53
CLNS1A-205ENST00000526009 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
CLNS1A-205ENST00000526009 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
CLNS1A-205ENST00000526009 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
CLNS1A-205ENST00000526009 NWD1Q149M9 1564 aa11.7□□□□□ -0.54
CLNS1A-205ENST00000526009 NOS1P29475 1434 aa11.69□□□□□ -0.54
CLNS1A-205ENST00000526009 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
CLNS1A-205ENST00000526009 RXRBP28702 533 aa11.69□□□□□ -0.54
CLNS1A-205ENST00000526009 LMTK2Q8IWU2 1503 aa11.69□□□□□ -0.54
CLNS1A-205ENST00000526009 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 PPP1R15AO75807 674 aaPredicted RBP11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 NCOA3Q9Y6Q9 1424 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 LRP6O75581 1613 aa11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
CLNS1A-205ENST00000526009 SRCAPQ6ZRS2 3230 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 ATF3P18847 181 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 C19orf44Q9H6X5 657 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
CLNS1A-205ENST00000526009 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
CLNS1A-205ENST00000526009 DAPK1P53355 1430 aa11.66□□□□□ -0.54
CLNS1A-205ENST00000526009 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 NUTM2AQ8IVF1 878 aaPredicted RBP11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 ZFYVE9O95405 1425 aa11.65□□□□□ -0.54
CLNS1A-205ENST00000526009 RIMS2Q9UQ26 1411 aa11.64□□□□□ -0.55
CLNS1A-205ENST00000526009 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
CLNS1A-205ENST00000526009 CHD2O14647 1828 aaKnown RBP11.64□□□□□ -0.55
CLNS1A-205ENST00000526009 CROCC2H7BZ55 1655 aa11.63□□□□□ -0.55
CLNS1A-205ENST00000526009 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
CLNS1A-205ENST00000526009 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
CLNS1A-205ENST00000526009 CFAP44Q96MT7 982 aa11.63□□□□□ -0.55
CLNS1A-205ENST00000526009 AHDC1Q5TGY3 1603 aaPredicted RBP11.62□□□□□ -0.55
CLNS1A-205ENST00000526009 PTPN23Q9H3S7 1636 aa11.62□□□□□ -0.55
CLNS1A-205ENST00000526009 BRINP3Q76B58 766 aa11.62□□□□□ -0.55
CLNS1A-205ENST00000526009 RPRD2Q5VT52 1461 aaKnown RBP11.62□□□□□ -0.55
CLNS1A-205ENST00000526009 CDK12Q9NYV4 1490 aaPredicted RBP11.62□□□□□ -0.55
CLNS1A-205ENST00000526009 AFF2P51816 1311 aa11.61□□□□□ -0.55
CLNS1A-205ENST00000526009 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
CLNS1A-205ENST00000526009 PIK3R4Q99570 1358 aa11.61□□□□□ -0.55
CLNS1A-205ENST00000526009 SHPRHQ149N8 1683 aa11.6□□□□□ -0.55
CLNS1A-205ENST00000526009 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
CLNS1A-205ENST00000526009 AMOTL2Q9Y2J4 779 aa11.6□□□□□ -0.55
CLNS1A-205ENST00000526009 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
CLNS1A-205ENST00000526009 SOX12O15370 315 aa11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 RBM6P78332 1123 aaKnown RBP11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 QTRT2Q9H974 415 aaKnown RBP11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.59□□□□□ -0.55
CLNS1A-205ENST00000526009 C8orf37Q96NL8 207 aa11.58□□□□□ -0.56
CLNS1A-205ENST00000526009 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
CLNS1A-205ENST00000526009 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
CLNS1A-205ENST00000526009 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
CLNS1A-205ENST00000526009 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
CLNS1A-205ENST00000526009 MYO5BQ9ULV0 1848 aa11.56□□□□□ -0.56
CLNS1A-205ENST00000526009 DIP2AQ14689 1571 aa11.56□□□□□ -0.56
CLNS1A-205ENST00000526009 MFRPQ9BY79 579 aa11.56□□□□□ -0.56
CLNS1A-205ENST00000526009 GCC2Q8IWJ2 1684 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 RGS12O14924 1447 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 DCCP43146 1447 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 NLRP6P59044 892 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 NGLY1Q96IV0 654 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.568e-8■■■■□ 20.9
CLNS1A-205ENST00000526009 ADGRL2O95490 1459 aa11.55□□□□□ -0.56
CLNS1A-205ENST00000526009 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
CLNS1A-205ENST00000526009 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms