RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 KIF1BO60333 1816 aa16.93■□□□□ 0.3
CTTN-209ENST00000525276 MYOM2P54296 1465 aa16.93■□□□□ 0.3
CTTN-209ENST00000525276 HRCP23327 699 aa16.92■□□□□ 0.3
CTTN-209ENST00000525276 FOXD1Q16676 465 aa16.92■□□□□ 0.3
CTTN-209ENST00000525276 NGLY1Q96IV0 654 aa16.92■□□□□ 0.3
CTTN-209ENST00000525276 USP21Q9UK80 565 aa16.9■□□□□ 0.3
CTTN-209ENST00000525276 BCL9LQ86UU0 1499 aa16.9■□□□□ 0.3
CTTN-209ENST00000525276 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.3
CTTN-209ENST00000525276 PXDNQ92626 1479 aa16.89■□□□□ 0.29
CTTN-209ENST00000525276 PPLO60437 1756 aa16.87■□□□□ 0.29
CTTN-209ENST00000525276 TRPC5Q9UL62 973 aaPredicted RBP16.87■□□□□ 0.29
CTTN-209ENST00000525276 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
CTTN-209ENST00000525276 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
CTTN-209ENST00000525276 CDC42BPGQ6DT37 1551 aa16.86■□□□□ 0.29
CTTN-209ENST00000525276 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
CTTN-209ENST00000525276 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
CTTN-209ENST00000525276 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
CTTN-209ENST00000525276 GLI3P10071 1580 aa16.81■□□□□ 0.28
CTTN-209ENST00000525276 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
CTTN-209ENST00000525276 TECPR2O15040 1411 aa16.79■□□□□ 0.28
CTTN-209ENST00000525276 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
CTTN-209ENST00000525276 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
CTTN-209ENST00000525276 SLIT2O94813 1529 aa16.79■□□□□ 0.28
CTTN-209ENST00000525276 FOXO3O43524 673 aa16.78■□□□□ 0.28
CTTN-209ENST00000525276 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
CTTN-209ENST00000525276 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
CTTN-209ENST00000525276 SPATA31E1Q6ZUB1 1445 aa16.78■□□□□ 0.28
CTTN-209ENST00000525276 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
CTTN-209ENST00000525276 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
CTTN-209ENST00000525276 RALGAPBQ86X10 1494 aa16.77■□□□□ 0.28
CTTN-209ENST00000525276 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.27
CTTN-209ENST00000525276 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.27
CTTN-209ENST00000525276 ADGRF5Q8IZF2 1346 aa16.76■□□□□ 0.27
CTTN-209ENST00000525276 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
CTTN-209ENST00000525276 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
CTTN-209ENST00000525276 FMN2Q9NZ56 1722 aa16.75■□□□□ 0.27
CTTN-209ENST00000525276 IFT172Q9UG01 1749 aa16.75■□□□□ 0.27
CTTN-209ENST00000525276 KNDC1Q76NI1 1749 aa16.74■□□□□ 0.27
CTTN-209ENST00000525276 CCDC125Q86Z20 511 aa16.74■□□□□ 0.27
CTTN-209ENST00000525276 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
CTTN-209ENST00000525276 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
CTTN-209ENST00000525276 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
CTTN-209ENST00000525276 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
CTTN-209ENST00000525276 UNC5CLQ8IV45 518 aa16.72■□□□□ 0.27
CTTN-209ENST00000525276 BLMP54132 1417 aaPredicted RBP16.71■□□□□ 0.27
CTTN-209ENST00000525276 ABCC11Q96J66 1382 aa16.71■□□□□ 0.27
CTTN-209ENST00000525276 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
CTTN-209ENST00000525276 PIK3C2GO75747 1445 aa16.7■□□□□ 0.26
CTTN-209ENST00000525276 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
CTTN-209ENST00000525276 DEFB132Q7Z7B7 95 aa16.69■□□□□ 0.26
CTTN-209ENST00000525276 STK26Q9P289 416 aa16.69■□□□□ 0.26
CTTN-209ENST00000525276 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CTTN-209ENST00000525276 TMEM132EQ6IEE7 984 aa16.68■□□□□ 0.26
CTTN-209ENST00000525276 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
CTTN-209ENST00000525276 TNS3Q68CZ2 1445 aa16.66■□□□□ 0.26
CTTN-209ENST00000525276 YTHDC2Q9H6S0 1430 aaKnown RBP16.66■□□□□ 0.26
CTTN-209ENST00000525276 NWD2Q9ULI1 1742 aa16.65■□□□□ 0.26
CTTN-209ENST00000525276 ONECUT3O60422 494 aaPredicted RBP16.65■□□□□ 0.26
CTTN-209ENST00000525276 LRP5O75197 1615 aa16.65■□□□□ 0.26
CTTN-209ENST00000525276 VPS72Q15906 364 aa16.64■□□□□ 0.25
CTTN-209ENST00000525276 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
CTTN-209ENST00000525276 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
CTTN-209ENST00000525276 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
CTTN-209ENST00000525276 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
CTTN-209ENST00000525276 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
CTTN-209ENST00000525276 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
CTTN-209ENST00000525276 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
CTTN-209ENST00000525276 SBNO1A3KN83 1393 aa16.61■□□□□ 0.25
CTTN-209ENST00000525276 DCAF11Q8TEB1 546 aa16.6■□□□□ 0.25
CTTN-209ENST00000525276 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
CTTN-209ENST00000525276 DHX57Q6P158 1386 aaKnown RBP16.6■□□□□ 0.25
CTTN-209ENST00000525276 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
CTTN-209ENST00000525276 FAM83GA6ND36 823 aa16.59■□□□□ 0.25
CTTN-209ENST00000525276 C14orf93Q9H972 538 aaKnown RBP16.58■□□□□ 0.24
CTTN-209ENST00000525276 KDM2AQ9Y2K7 1162 aa16.58■□□□□ 0.24
CTTN-209ENST00000525276 KRT27Q7Z3Y8 459 aa16.57■□□□□ 0.24
CTTN-209ENST00000525276 CFAP70Q5T0N1 1121 aa16.56■□□□□ 0.24
CTTN-209ENST00000525276 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
CTTN-209ENST00000525276 CRYBG1Q9Y4K1 1723 aa16.55■□□□□ 0.24
CTTN-209ENST00000525276 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
CTTN-209ENST00000525276 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
CTTN-209ENST00000525276 PSDA5PKW4 1024 aaPredicted RBP16.54■□□□□ 0.24
CTTN-209ENST00000525276 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
CTTN-209ENST00000525276 DLC1Q96QB1 1528 aa16.54■□□□□ 0.24
CTTN-209ENST00000525276 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 PSME1Q06323 249 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 PRAM1Q96QH2 718 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 SIN3AQ96ST3 1273 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
CTTN-209ENST00000525276 UTRNP46939 3433 aa16.52■□□□□ 0.24
CTTN-209ENST00000525276 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
CTTN-209ENST00000525276 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
CTTN-209ENST00000525276 TNS1Q9HBL0 1735 aaKnown RBP16.52■□□□□ 0.24
CTTN-209ENST00000525276 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
CTTN-209ENST00000525276 SF3B2Q13435 895 aaKnown RBP16.51■□□□□ 0.23
CTTN-209ENST00000525276 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
CTTN-209ENST00000525276 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
CTTN-209ENST00000525276 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
CTTN-209ENST00000525276 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms