RNA–Protein interactions for RNA: ENST00000524579.1

CTNND1-209, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-209ENST00000524579 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-209ENST00000524579 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
CTNND1-209ENST00000524579 SPTLC1O15269 473 aa10.64□□□□□ -0.71
CTNND1-209ENST00000524579 FAM160A2Q8N612 972 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-209ENST00000524579 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
CTNND1-209ENST00000524579 S1PR4O95977 384 aa10.63□□□□□ -0.71
CTNND1-209ENST00000524579 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
CTNND1-209ENST00000524579 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
CTNND1-209ENST00000524579 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
CTNND1-209ENST00000524579 SLC6A16Q9GZN6 736 aa10.62□□□□□ -0.71
CTNND1-209ENST00000524579 PPEF1O14829 653 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-209ENST00000524579 USB1Q9BQ65 265 aaKnown RBP10.61□□□□□ -0.71
CTNND1-209ENST00000524579 PRDM9Q9NQV7 894 aa10.61□□□□□ -0.71
CTNND1-209ENST00000524579 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.61□□□□□ -0.71
CTNND1-209ENST00000524579 GJA5P36382 358 aa10.6□□□□□ -0.71
CTNND1-209ENST00000524579 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
CTNND1-209ENST00000524579 PROCA1Q8NCQ7 364 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-209ENST00000524579 ATP1B4Q9UN42 357 aaPredicted RBP10.59□□□□□ -0.71
CTNND1-209ENST00000524579 RNF223E7ERA6 249 aa10.58□□□□□ -0.72
CTNND1-209ENST00000524579 GGCXP38435 758 aa10.58□□□□□ -0.72
CTNND1-209ENST00000524579 MTMR2Q13614 643 aa10.58□□□□□ -0.72
CTNND1-209ENST00000524579 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
CTNND1-209ENST00000524579 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
CTNND1-209ENST00000524579 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
CTNND1-209ENST00000524579 HRCP23327 699 aa10.57□□□□□ -0.72
CTNND1-209ENST00000524579 QPCTQ16769 361 aa10.57□□□□□ -0.72
CTNND1-209ENST00000524579 MSS51Q4VC12 460 aa10.56□□□□□ -0.72
CTNND1-209ENST00000524579 RETREG3Q86VR2 466 aa10.56□□□□□ -0.72
CTNND1-209ENST00000524579 ZBTB3Q9H5J0 574 aa10.55□□□□□ -0.72
CTNND1-209ENST00000524579 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-209ENST00000524579 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-209ENST00000524579 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-209ENST00000524579 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-209ENST00000524579 PRR7Q8TB68 274 aa10.54□□□□□ -0.72
CTNND1-209ENST00000524579 LILRB3O75022 631 aa10.53□□□□□ -0.72
CTNND1-209ENST00000524579 TUSC1Q2TAM9 212 aa10.53□□□□□ -0.72
CTNND1-209ENST00000524579 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-209ENST00000524579 PRPF38BQ5VTL8 546 aaKnown RBP10.53□□□□□ -0.72
CTNND1-209ENST00000524579 MMP16P51512 607 aa10.52□□□□□ -0.73
CTNND1-209ENST00000524579 FBXO31Q5XUX0 539 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-209ENST00000524579 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
CTNND1-209ENST00000524579 CFAP99D6REC4 459 aa10.51□□□□□ -0.73
CTNND1-209ENST00000524579 DXOO77932 396 aaKnown RBP10.51□□□□□ -0.73
CTNND1-209ENST00000524579 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
CTNND1-209ENST00000524579 FCF1Q9Y324 198 aaKnown RBP10.51□□□□□ -0.73
CTNND1-209ENST00000524579 JUNDP17535 347 aa10.5□□□□□ -0.73
CTNND1-209ENST00000524579 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.5□□□□□ -0.73
CTNND1-209ENST00000524579 GOPCQ9HD26 462 aa10.5□□□□□ -0.73
CTNND1-209ENST00000524579 PLA2G2CQ5R387 149 aa10.49□□□□□ -0.73
CTNND1-209ENST00000524579 PCMTD1Q96MG8 357 aaPredicted RBP10.49□□□□□ -0.73
CTNND1-209ENST00000524579 TSC1Q92574 1164 aa10.48□□□□□ -0.73
CTNND1-209ENST00000524579 PRKD2Q9BZL6 878 aa10.48□□□□□ -0.73
CTNND1-209ENST00000524579 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
CTNND1-209ENST00000524579 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-209ENST00000524579 LIAT1Q6ZQX7 453 aa10.45□□□□□ -0.74
CTNND1-209ENST00000524579 RGS20O76081 388 aa10.44□□□□□ -0.74
CTNND1-209ENST00000524579 SLC19A1P41440 591 aa10.44□□□□□ -0.74
CTNND1-209ENST00000524579 DESI1Q6ICB0 168 aa10.44□□□□□ -0.74
CTNND1-209ENST00000524579 NUDT12Q9BQG2 462 aa10.44□□□□□ -0.74
CTNND1-209ENST00000524579 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-209ENST00000524579 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
CTNND1-209ENST00000524579 LYPD8Q6UX82 237 aa10.42□□□□□ -0.74
CTNND1-209ENST00000524579 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
CTNND1-209ENST00000524579 PTPRNQ16849 979 aa10.41□□□□□ -0.74
CTNND1-209ENST00000524579 PTCRAQ6ISU1 281 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-209ENST00000524579 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-209ENST00000524579 CCNYL3P0C7X3 344 aa10.4□□□□□ -0.74
CTNND1-209ENST00000524579 RFC5P40937 340 aa10.4□□□□□ -0.74
CTNND1-209ENST00000524579 HELBQ8NG08 1087 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-209ENST00000524579 EVA1BQ9NVM1 165 aa10.4□□□□□ -0.74
CTNND1-209ENST00000524579 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
CTNND1-209ENST00000524579 AP1G2O75843 785 aa10.39□□□□□ -0.75
CTNND1-209ENST00000524579 SPRYD7Q5W111 196 aa10.38□□□□□ -0.75
CTNND1-209ENST00000524579 CTHP32929 405 aa10.37□□□□□ -0.75
CTNND1-209ENST00000524579 RPIAP49247 311 aa10.37□□□□□ -0.75
CTNND1-209ENST00000524579 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
CTNND1-209ENST00000524579 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
CTNND1-209ENST00000524579 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
CTNND1-209ENST00000524579 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
CTNND1-209ENST00000524579 TRIM32Q13049 653 aa10.34□□□□□ -0.75
CTNND1-209ENST00000524579 ZNF697Q5TEC3 545 aa10.34□□□□□ -0.75
CTNND1-209ENST00000524579 ZNF598Q86UK7 904 aaKnown RBP10.34□□□□□ -0.75
CTNND1-209ENST00000524579 UNC93B1Q9H1C4 597 aa10.34□□□□□ -0.75
CTNND1-209ENST00000524579 F12P00748 615 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-209ENST00000524579 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
CTNND1-209ENST00000524579 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
CTNND1-209ENST00000524579 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
CTNND1-209ENST00000524579 FOXC1Q12948 553 aa10.3□□□□□ -0.76
CTNND1-209ENST00000524579 BAP1Q92560 729 aa10.3□□□□□ -0.76
CTNND1-209ENST00000524579 NR6A1Q15406 480 aa10.29□□□□□ -0.76
CTNND1-209ENST00000524579 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
CTNND1-209ENST00000524579 HMX1Q9NP08 348 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-209ENST00000524579 SKOR1P84550 965 aa10.28□□□□□ -0.76
CTNND1-209ENST00000524579 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
CTNND1-209ENST00000524579 SH3BP2P78314 561 aa10.27□□□□□ -0.77
CTNND1-209ENST00000524579 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
CTNND1-209ENST00000524579 PKD2L1Q9P0L9 805 aa10.27□□□□□ -0.77
CTNND1-209ENST00000524579 TNFRSF10AO00220 468 aa10.26□□□□□ -0.77
CTNND1-209ENST00000524579 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
CTNND1-209ENST00000524579 GDF9O60383 454 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms