RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 STK26Q9P289 416 aa3.32□□□□□ -1.88
PCM1-222ENST00000524226 SUPT16HQ9Y5B9 1047 aaKnown RBP3.32□□□□□ -1.88
PCM1-222ENST00000524226 SRPK2P78362 688 aaKnown RBP3.32□□□□□ -1.88
PCM1-222ENST00000524226 CFAP53Q96M91 514 aa3.32□□□□□ -1.88
PCM1-222ENST00000524226 BCL11AQ9H165 835 aa3.32□□□□□ -1.88
PCM1-222ENST00000524226 SYNMO15061 1565 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 ARHGAP31Q2M1Z3 1444 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 MROH2AA6NES4 1674 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 MORC1Q86VD1 984 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 C14orf93Q9H972 538 aaKnown RBP3.31□□□□□ -1.88
PCM1-222ENST00000524226 CHAF1AQ13111 956 aaPredicted RBP3.31□□□□□ -1.88
PCM1-222ENST00000524226 SAFB2Q14151 953 aaKnown RBP eCLIP3.31□□□□□ -1.88
PCM1-222ENST00000524226 HDGFL2Q7Z4V5 671 aaPredicted RBP3.31□□□□□ -1.88
PCM1-222ENST00000524226 IQGAP1P46940 1657 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 ARHGEF40Q8TER5 1519 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 USP35Q9P2H5 1018 aa3.31□□□□□ -1.88
PCM1-222ENST00000524226 SETBP1Q9Y6X0 1596 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 TOM1O60784 492 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 PIK3C2GO75747 1445 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 TERF2IPQ9NYB0 399 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 SALL2Q9Y467 1007 aaPredicted RBP3.3□□□□□ -1.88
PCM1-222ENST00000524226 CLTCQ00610 1675 aaKnown RBP3.3□□□□□ -1.88
PCM1-222ENST00000524226 CGNL1Q0VF96 1302 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 UBAP1LF5GYI3 381 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 MS4A1P11836 297 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 PTMSP20962 102 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 DNTTIP2Q5QJE6 756 aaKnown RBP3.3□□□□□ -1.88
PCM1-222ENST00000524226 TMEM132EQ6IEE7 984 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 ASXL1Q8IXJ9 1541 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 ERVK-7P63135 1459 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 PREX1Q8TCU6 1659 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 AGLP35573 1532 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 DNAJC5Q9H3Z4 198 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 NUDCQ9Y266 331 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 REREQ9P2R6 1566 aa3.3□□□□□ -1.88
PCM1-222ENST00000524226 IDI1Q13907 227 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 C16orf71Q8IYS4 520 aaPredicted RBP3.29□□□□□ -1.88
PCM1-222ENST00000524226 TESK2Q96S53 571 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 PPLO60437 1756 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 PARD3Q8TEW0 1356 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 TNRQ92752 1358 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 RIMS2Q9UQ26 1411 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 NINLQ9Y2I6 1382 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 PDE3BQ13370 1112 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 FBXO31Q5XUX0 539 aaPredicted RBP3.29□□□□□ -1.88
PCM1-222ENST00000524226 PROSER2Q86WR7 435 aaPredicted RBP3.29□□□□□ -1.88
PCM1-222ENST00000524226 NRXN1Q9ULB1 1477 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 IFT172Q9UG01 1749 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 QRICH2Q9H0J4 1663 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 ATAD2Q6PL18 1390 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 CCDC184Q52MB2 194 aa3.29□□□□□ -1.88
PCM1-222ENST00000524226 NGDNQ8NEJ9 315 aaKnown RBP3.29□□□□□ -1.88
PCM1-222ENST00000524226 MINK1Q8N4C8 1332 aaPredicted RBP3.29□□□□□ -1.88
PCM1-222ENST00000524226 PPP2R1AP30153 589 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 IRX6P78412 446 aaPredicted RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 PNNQ9H307 717 aaKnown RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 NSD3Q9BZ95 1437 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 ANKLE2Q86XL3 938 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 PIK3C2BO00750 1634 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 NEXMIFQ5QGS0 1516 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 ZMYM3Q14202 1370 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 SMG6Q86US8 1419 aaKnown RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 PSME1Q06323 249 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 NBR1Q14596 966 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 THEMISQ8N1K5 641 aaPredicted RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 PNISRQ8TF01 805 aaKnown RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 PRAM1Q96QH2 718 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 CABP2Q9NPB3 220 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 PPP4R2Q9NY27 417 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 CFAP65Q6ZU64 1925 aaKnown RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 ZFYVE9O95405 1425 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 CWC22Q9HCG8 908 aaKnown RBP3.28□□□□□ -1.88
PCM1-222ENST00000524226 NSD2O96028 1365 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 MYO3AQ8NEV4 1616 aa3.28□□□□□ -1.88
PCM1-222ENST00000524226 SBNO2Q9Y2G9 1366 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 KRI1Q8N9T8 703 aaKnown RBP3.27□□□□□ -1.89
PCM1-222ENST00000524226 PUS7Q96PZ0 661 aaKnown RBP3.27□□□□□ -1.89
PCM1-222ENST00000524226 MAPK8IP3Q9UPT6 1336 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 YTHDC2Q9H6S0 1430 aaKnown RBP3.27□□□□□ -1.89
PCM1-222ENST00000524226 KIF13AQ9H1H9 1805 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 SENP3-EIF4A1A0A087X0R7 540 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 NAP1L5Q96NT1 182 aaPredicted RBP3.27□□□□□ -1.89
PCM1-222ENST00000524226 CDK19Q9BWU1 502 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 NPC1L1Q9UHC9 1359 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 SIGLEC1Q9BZZ2 1709 aa3.27□□□□□ -1.89
PCM1-222ENST00000524226 SOX12O15370 315 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 SPATA31D1Q6ZQQ2 1576 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 NGEFQ8N5V2 710 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 TMEM131LA2VDJ0 1609 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 INSRP06213 1382 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 ANKRD36BQ8N2N9 1353 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 RCAN3Q9UKA8 241 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 GTF2E1P29083 439 aaPredicted RBP3.26□□□□□ -1.89
PCM1-222ENST00000524226 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.26□□□□□ -1.89
PCM1-222ENST00000524226 U2SURPO15042 1029 aaKnown RBP3.26□□□□□ -1.89
PCM1-222ENST00000524226 PER1O15534 1290 aaPredicted RBP3.26□□□□□ -1.89
PCM1-222ENST00000524226 CCDC146Q8IYE0 955 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 SLC12A5Q9H2X9 1139 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 ALKQ9UM73 1620 aa3.26□□□□□ -1.89
PCM1-222ENST00000524226 NLRP1Q9C000 1473 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms