RNA–Protein interactions for RNA: ENST00000524202.5

PTK2-255, Transcript of protein tyrosine kinase 2, human

TSL 1 (best)

Gene PTK2, Length 3,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-255	ENST00000524202	PTPRT	O14522	1441 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	FTSJ3	Q8IY81	847 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	RUNDC1	Q96C34	613 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	CFAP53	Q96M91	514 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	ZRANB1	Q9UGI0	708 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	TRPM2	O94759	1503 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	FAM161A	Q3B820	660 aa		10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.4	□□□□□ -0.74
PTK2-255	ENST00000524202	RARS	P54136	660 aa	Known RBP	10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	EXOSC9	Q06265	439 aa	Known RBP	10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	EVC2	Q86UK5	1308 aa		10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	VGF	O15240	615 aa	Predicted RBP	10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	MS4A1	P11836	297 aa		10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	SMC4	Q9NTJ3	1288 aa		10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	FAM69C	Q0P6D2	419 aa		10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	ITPRIP	Q8IWB1	547 aa		10.39	□□□□□ -0.75
PTK2-255	ENST00000524202	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.38	□□□□□ -0.75
PTK2-255	ENST00000524202	NKTR	P30414	1462 aa	Known RBP	10.38	□□□□□ -0.75
PTK2-255	ENST00000524202	FRAT2	O75474	233 aa	Predicted RBP	10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	RIPK4	P57078	832 aa		10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	C1orf115	Q9H7X2	142 aa		10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	SPHKAP	Q2M3C7	1700 aa		10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	CLASP1	Q7Z460	1538 aa		10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	MAPK8IP3	Q9UPT6	1336 aa		10.37	□□□□□ -0.75
PTK2-255	ENST00000524202	NFKBIB	Q15653	356 aa		10.36	□□□□□ -0.75
PTK2-255	ENST00000524202	TRMT2A	Q8IZ69	625 aa	Known RBP	10.36	□□□□□ -0.75
PTK2-255	ENST00000524202	CDK19	Q9BWU1	502 aa		10.36	□□□□□ -0.75
PTK2-255	ENST00000524202	TXNDC2	Q86VQ3	553 aa		10.36	□□□□□ -0.75
PTK2-255	ENST00000524202	YEATS2	Q9ULM3	1422 aa		10.36	□□□□□ -0.75
PTK2-255	ENST00000524202	PIK3C2G	O75747	1445 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	FYB1	O15117	783 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	RRS1	Q15050	365 aa	Known RBP	10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	ABCA6	Q8N139	1617 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	DCTN1	Q14203	1278 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	PDZRN3	Q9UPQ7	1066 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	UHRF1BP1L	A0JNW5	1464 aa		10.35	□□□□□ -0.75
PTK2-255	ENST00000524202	SSH1	Q8WYL5	1049 aa		10.34	□□□□□ -0.75
PTK2-255	ENST00000524202	EMILIN1	Q9Y6C2	1016 aa		10.34	□□□□□ -0.75
PTK2-255	ENST00000524202		A0A1W2PP64	1363 aa		10.34	□□□□□ -0.75
PTK2-255	ENST00000524202	ZNF518A	Q6AHZ1	1483 aa		10.34	□□□□□ -0.75
PTK2-255	ENST00000524202	APBB1	O00213	710 aa		10.33	□□□□□ -0.75
PTK2-255	ENST00000524202	MFAP1	P55081	439 aa	Known RBP	10.33	□□□□□ -0.75
PTK2-255	ENST00000524202	NOB1	Q9ULX3	412 aa	Known RBP	10.33	□□□□□ -0.75
PTK2-255	ENST00000524202	CEP152	O94986	1710 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	STAC3	Q96MF2	364 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	BRPF3	Q9ULD4	1205 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	PPRC1	Q5VV67	1664 aa	Known RBP	10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	FAM83G	A6ND36	823 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	SLC24A1	O60721	1099 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	PRKAR2B	P31323	418 aa		10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	TMPO	P42166	694 aa	Known RBP	10.33	□□□□□ -0.76
PTK2-255	ENST00000524202	MROH2A	A6NES4	1674 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	IQGAP1	P46940	1657 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	NME9	Q86XW9	330 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	DDRGK1	Q96HY6	314 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	PHACTR3	Q96KR7	559 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	SYNM	O15061	1565 aa		10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	RNF17	Q9BXT8	1623 aa	Known RBP	10.32	□□□□□ -0.76
PTK2-255	ENST00000524202	KDM5A	P29375	1690 aa	Known RBP	10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	MAP3K4	Q9Y6R4	1608 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	INSR	P06213	1382 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	TRIM27	P14373	513 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	TET3	O43151	1660 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	DZIP1L	Q8IYY4	767 aa	Known RBP	10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	LNPK	Q9C0E8	428 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	MYH16	Q9H6N6	1097 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	KIDINS220	Q9ULH0	1771 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	DIAPH1	O60610	1272 aa	Known RBP	10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	FOXD4L1	Q9NU39	408 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	TERF2IP	Q9NYB0	399 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	TRIM35	Q9UPQ4	493 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	MYOM1	P52179	1685 aa		10.31	□□□□□ -0.76
PTK2-255	ENST00000524202	POLR3A	O14802	1390 aa	Predicted RBP	10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	MROH1	Q8NDA8	1641 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	PDE3A	Q14432	1141 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	ZKSCAN2	Q63HK3	967 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	TMEM57	Q8N5G2	664 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	GZF1	Q9H116	711 aa	Predicted RBP	10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	TSPYL6	Q8N831	410 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	ESF1	Q9H501	851 aa	Known RBP	10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	EFCAB6	Q5THR3	1501 aa		10.3	□□□□□ -0.76
PTK2-255	ENST00000524202	KRT24	Q2M2I5	525 aa		10.29	□□□□□ -0.76
PTK2-255	ENST00000524202	POGZ	Q7Z3K3	1410 aa		10.29	□□□□□ -0.76
PTK2-255	ENST00000524202	INO80	Q9ULG1	1556 aa	Predicted RBP	10.29	□□□□□ -0.76
PTK2-255	ENST00000524202	RBM33	Q96EV2	1170 aa	Known RBP	10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	CEBPA	P49715	358 aa	Predicted RBP	10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	MIS18A	Q9NYP9	233 aa		10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	KIF1B	O60333	1816 aa		10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	MVP	Q14764	893 aa	Known RBP	10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	NUTM2G	Q5VZR2	741 aa		10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	LAMC1	P11047	1609 aa		10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	ATAD2	Q6PL18	1390 aa		10.28	□□□□□ -0.76
PTK2-255	ENST00000524202	WDR63	Q8IWG1	891 aa		10.27	□□□□□ -0.77
PTK2-255	ENST00000524202	SLC26A8	Q96RN1	970 aa		10.27	□□□□□ -0.77
PTK2-255	ENST00000524202	RWDD1	Q9H446	243 aa	Predicted RBP	10.27	□□□□□ -0.77
PTK2-255	ENST00000524202	NPC1L1	Q9UHC9	1359 aa		10.27	□□□□□ -0.77
PTK2-255	ENST00000524202	ABCA9	Q8IUA7	1624 aa		10.27	□□□□□ -0.77
PTK2-255	ENST00000524202	ANKRD36B	Q8N2N9	1353 aa		10.26	□□□□□ -0.77
PTK2-255	ENST00000524202	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.26	□□□□□ -0.77

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