RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	RALGAPB	Q86X10	1494 aa		16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	XPC	Q01831	940 aa	Predicted RBP	16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	ESCO1	Q5FWF5	840 aa		16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	SEPT12	Q8IYM1	358 aa		16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	NUP155	O75694	1391 aa		16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	ROBO2	Q9HCK4	1378 aa		16.61	■□□□□ 0.25
SORBS3-222	ENST00000524057	FOXO3	O43524	673 aa		16.6	■□□□□ 0.25
SORBS3-222	ENST00000524057	NPHP3	Q7Z494	1330 aa		16.6	■□□□□ 0.25
SORBS3-222	ENST00000524057	GLI3	P10071	1580 aa		16.59	■□□□□ 0.25
SORBS3-222	ENST00000524057	ONECUT3	O60422	494 aa	Predicted RBP	16.58	■□□□□ 0.24
SORBS3-222	ENST00000524057	IQGAP3	Q86VI3	1631 aa		16.57	■□□□□ 0.24
SORBS3-222	ENST00000524057	SLIT2	O94813	1529 aa		16.57	■□□□□ 0.24
SORBS3-222	ENST00000524057	PXDN	Q92626	1479 aa		16.56	■□□□□ 0.24
SORBS3-222	ENST00000524057	MARF1	Q9Y4F3	1742 aa	Known RBP	16.56	■□□□□ 0.24
SORBS3-222	ENST00000524057	BRWD3	Q6RI45	1802 aa		16.55	■□□□□ 0.24
SORBS3-222	ENST00000524057	KRT27	Q7Z3Y8	459 aa		16.55	■□□□□ 0.24
SORBS3-222	ENST00000524057	BAG6	P46379	1132 aa		16.54	■□□□□ 0.24
SORBS3-222	ENST00000524057	VPS72	Q15906	364 aa		16.54	■□□□□ 0.24
SORBS3-222	ENST00000524057	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	16.53	■□□□□ 0.24
SORBS3-222	ENST00000524057	NEXMIF	Q5QGS0	1516 aa		16.52	■□□□□ 0.24
SORBS3-222	ENST00000524057	PPARGC1B	Q86YN6	1023 aa	Known RBP	16.52	■□□□□ 0.24
SORBS3-222	ENST00000524057	VGF	O15240	615 aa	Predicted RBP	16.51	■□□□□ 0.23
SORBS3-222	ENST00000524057	EN1	Q05925	392 aa	Predicted RBP	16.51	■□□□□ 0.23
SORBS3-222	ENST00000524057	LRPPRC	P42704	1394 aa	Known RBP	16.51	■□□□□ 0.23
SORBS3-222	ENST00000524057	SPHKAP	Q2M3C7	1700 aa		16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	SPATA31A3	Q5VYP0	1347 aa		16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	NUTM2F	A1L443	756 aa		16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	R3HDM1	Q15032	1099 aa	Known RBP	16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	CCDC9	Q9Y3X0	531 aa	Known RBP	16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	HFM1	A2PYH4	1435 aa		16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	ROCK1	Q13464	1354 aa		16.5	■□□□□ 0.23
SORBS3-222	ENST00000524057	YY1	P25490	414 aa		16.49	■□□□□ 0.23
SORBS3-222	ENST00000524057	PRAG1	Q86YV5	1406 aa		16.48	■□□□□ 0.23
SORBS3-222	ENST00000524057	KRT28	Q7Z3Y7	464 aa		16.47	■□□□□ 0.23
SORBS3-222	ENST00000524057	CABLES1	Q8TDN4	633 aa		16.47	■□□□□ 0.23
SORBS3-222	ENST00000524057	WAPL	Q7Z5K2	1190 aa		16.45	■□□□□ 0.22
SORBS3-222	ENST00000524057	PLEKHG5	O94827	1062 aa		16.44	■□□□□ 0.22
SORBS3-222	ENST00000524057	HAP1	P54257	671 aa	Predicted RBP	16.44	■□□□□ 0.22
SORBS3-222	ENST00000524057		A0A0G2JS52	829 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	FAM83G	A6ND36	823 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	MYT1	Q01538	1121 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	FAM98C	Q17RN3	349 aa	Known RBP	16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	FAM182B	Q5T319	152 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	CLTCL1	P53675	1640 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	CDC42BPG	Q6DT37	1551 aa		16.43	■□□□□ 0.22
SORBS3-222	ENST00000524057	ITGAE	P38570	1179 aa		16.42	■□□□□ 0.22
SORBS3-222	ENST00000524057	NAIP	Q13075	1403 aa		16.42	■□□□□ 0.22
SORBS3-222	ENST00000524057	RPGRIP1L	Q68CZ1	1315 aa		16.42	■□□□□ 0.22
SORBS3-222	ENST00000524057	USP32	Q8NFA0	1604 aa		16.41	■□□□□ 0.22
SORBS3-222	ENST00000524057	EZH2	Q15910	746 aa	Known RBP	16.41	■□□□□ 0.22
SORBS3-222	ENST00000524057	STK26	Q9P289	416 aa		16.4	■□□□□ 0.22
SORBS3-222	ENST00000524057	CCDC144A	A2RUR9	1427 aa		16.38	■□□□□ 0.21
SORBS3-222	ENST00000524057	PSME1	Q06323	249 aa		16.38	■□□□□ 0.21
SORBS3-222	ENST00000524057	CAMKK2	Q96RR4	588 aa		16.38	■□□□□ 0.21
SORBS3-222	ENST00000524057	LMOD2	Q6P5Q4	547 aa		16.37	■□□□□ 0.21
SORBS3-222	ENST00000524057	KIF1B	O60333	1816 aa		16.36	■□□□□ 0.21
SORBS3-222	ENST00000524057	BTG4	Q9NY30	223 aa		16.36	■□□□□ 0.21
SORBS3-222	ENST00000524057	PLEKHH1	Q9ULM0	1364 aa		16.36	■□□□□ 0.21
SORBS3-222	ENST00000524057	NWD2	Q9ULI1	1742 aa		16.36	■□□□□ 0.21
SORBS3-222	ENST00000524057	PHF8	Q9UPP1	1060 aa		16.35	■□□□□ 0.21
SORBS3-222	ENST00000524057	DISP2	A7MBM2	1401 aa		16.35	■□□□□ 0.21
SORBS3-222	ENST00000524057	TNS3	Q68CZ2	1445 aa		16.35	■□□□□ 0.21
SORBS3-222	ENST00000524057	PLCH1	Q4KWH8	1693 aa		16.34	■□□□□ 0.21
SORBS3-222	ENST00000524057	TMEM132E	Q6IEE7	984 aa		16.33	■□□□□ 0.2
SORBS3-222	ENST00000524057	SBNO1	A3KN83	1393 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	TECPR2	O15040	1411 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	TRIM37	O94972	964 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	RGPD1	P0DJD0	1748 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	ADGRF5	Q8IZF2	1346 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	ABCC11	Q96J66	1382 aa		16.32	■□□□□ 0.2
SORBS3-222	ENST00000524057	SPATA31A5	Q5VU36	1347 aa		16.31	■□□□□ 0.2
SORBS3-222	ENST00000524057	SPATA31A7	Q8IWB4	1347 aa		16.31	■□□□□ 0.2
SORBS3-222	ENST00000524057	APBA3	O96018	575 aa		16.3	■□□□□ 0.2
SORBS3-222	ENST00000524057	KIF1A	Q12756	1690 aa		16.3	■□□□□ 0.2
SORBS3-222	ENST00000524057	ARHGEF10	O15013	1369 aa		16.29	■□□□□ 0.2
SORBS3-222	ENST00000524057	FMN2	Q9NZ56	1722 aa		16.29	■□□□□ 0.2
SORBS3-222	ENST00000524057	DCAF8L1	A6NGE4	600 aa		16.29	■□□□□ 0.2
SORBS3-222	ENST00000524057	FAM196A	Q6ZSG2	479 aa		16.29	■□□□□ 0.2
SORBS3-222	ENST00000524057	RRBP1	Q9P2E9	1410 aa	Known RBP	16.28	■□□□□ 0.2
SORBS3-222	ENST00000524057	SIRT1	Q96EB6	747 aa		16.27	■□□□□ 0.2
SORBS3-222	ENST00000524057	PPP1R1B	Q9UD71	204 aa	Predicted RBP	16.27	■□□□□ 0.2
SORBS3-222	ENST00000524057	PPL	O60437	1756 aa		16.27	■□□□□ 0.2
SORBS3-222	ENST00000524057	NRAP	Q86VF7	1730 aa		16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	TNS1	Q9HBL0	1735 aa	Known RBP	16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	NBPF8	Q3BBV2	869 aa		16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	NBPF14	Q5TI25	921 aa		16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	PMFBP1	Q8TBY8	1022 aa		16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	SPON1	Q9HCB6	807 aa		16.26	■□□□□ 0.19
SORBS3-222	ENST00000524057	NRXN1	Q9ULB1	1477 aa		16.25	■□□□□ 0.19
SORBS3-222	ENST00000524057	KCNQ2	O43526	872 aa		16.25	■□□□□ 0.19
SORBS3-222	ENST00000524057	RGPD8	O14715	1765 aa	Predicted RBP	16.25	■□□□□ 0.19
SORBS3-222	ENST00000524057	PARD3	Q8TEW0	1356 aa		16.25	■□□□□ 0.19
SORBS3-222	ENST00000524057	RGL3	Q3MIN7	710 aa		16.24	■□□□□ 0.19
SORBS3-222	ENST00000524057	ABCA3	Q99758	1704 aa		16.24	■□□□□ 0.19
SORBS3-222	ENST00000524057	SPATA31A1	Q5TZJ5	1347 aa		16.22	■□□□□ 0.19
SORBS3-222	ENST00000524057	YTHDC2	Q9H6S0	1430 aa	Known RBP	16.22	■□□□□ 0.19
SORBS3-222	ENST00000524057	THSD7A	Q9UPZ6	1657 aa		16.22	■□□□□ 0.19
SORBS3-222	ENST00000524057	ZNF784	Q8NCA9	323 aa	Predicted RBP	16.22	■□□□□ 0.19
SORBS3-222	ENST00000524057	IFFO2	Q5TF58	517 aa		16.21	■□□□□ 0.19
SORBS3-222	ENST00000524057	SLC4A1AP	Q9BWU0	796 aa	Known RBP	16.21	■□□□□ 0.19

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms