RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 ZNF598Q86UK7 904 aaKnown RBP8.25□□□□□ -1.09
PCM1-220ENST00000523896 USB1Q9BQ65 265 aaKnown RBP8.25□□□□□ -1.09
PCM1-220ENST00000523896 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
PCM1-220ENST00000523896 DIXDC1Q155Q3 683 aa8.24□□□□□ -1.09
PCM1-220ENST00000523896 FAM160A2Q8N612 972 aaPredicted RBP8.24□□□□□ -1.09
PCM1-220ENST00000523896 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
PCM1-220ENST00000523896 PRDM9Q9NQV7 894 aa8.24□□□□□ -1.09
PCM1-220ENST00000523896 CD2BP2O95400 341 aaKnown RBP8.23□□□□□ -1.09
PCM1-220ENST00000523896 RPIAP49247 311 aa8.23□□□□□ -1.09
PCM1-220ENST00000523896 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
PCM1-220ENST00000523896 PARP9Q8IXQ6 854 aa8.23□□□□□ -1.09
PCM1-220ENST00000523896 FDX1P10109 184 aa8.22□□□□□ -1.09
PCM1-220ENST00000523896 HLA-CQ95604 372 aa8.22□□□□□ -1.09
PCM1-220ENST00000523896 BEGAINQ9BUH8 593 aa8.22□□□□□ -1.09
PCM1-220ENST00000523896 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
PCM1-220ENST00000523896 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
PCM1-220ENST00000523896 GUCA2AQ02747 115 aa8.21□□□□□ -1.1
PCM1-220ENST00000523896 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
PCM1-220ENST00000523896 RETREG3Q86VR2 466 aa8.2□□□□□ -1.1
PCM1-220ENST00000523896 SPIRE2Q8WWL2 714 aa8.2□□□□□ -1.1
PCM1-220ENST00000523896 MMP16P51512 607 aa8.19□□□□□ -1.1
PCM1-220ENST00000523896 PKDCCQ504Y2 493 aa8.19□□□□□ -1.1
PCM1-220ENST00000523896 CCDC24Q8N4L8 307 aa8.19□□□□□ -1.1
PCM1-220ENST00000523896 DXOO77932 396 aaKnown RBP8.18□□□□□ -1.1
PCM1-220ENST00000523896 JUNDP17535 347 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 PRR20EP86478 221 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 PRR20CP86479 221 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 PRR20DP86480 221 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 PRR20BP86481 221 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 PRR20AP86496 221 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 FOXC1Q12948 553 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 TRAF7Q6Q0C0 670 aa8.18□□□□□ -1.1
PCM1-220ENST00000523896 EMID1Q96A84 441 aaPredicted RBP8.18□□□□□ -1.1
PCM1-220ENST00000523896 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
PCM1-220ENST00000523896 MOXD2PA6NHM9 499 aa8.16□□□□□ -1.1
PCM1-220ENST00000523896 SPDYE5A6NIY4 337 aa8.16□□□□□ -1.1
PCM1-220ENST00000523896 FAM187AA6NFU0 413 aa8.15□□□□□ -1.1
PCM1-220ENST00000523896 NDUFV2P19404 249 aa8.15□□□□□ -1.1
PCM1-220ENST00000523896 MTMR2Q13614 643 aa8.15□□□□□ -1.1
PCM1-220ENST00000523896 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
PCM1-220ENST00000523896 DDRGK1Q96HY6 314 aa8.15□□□□□ -1.1
PCM1-220ENST00000523896 TBC1D2Q9BYX2 928 aa8.15□□□□□ -1.1
PCM1-220ENST00000523896 DGAT1O75907 488 aa8.14□□□□□ -1.11
PCM1-220ENST00000523896 MS4A1P11836 297 aa8.14□□□□□ -1.11
PCM1-220ENST00000523896 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
PCM1-220ENST00000523896 GDF9O60383 454 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 GJA5P36382 358 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 TRIM32Q13049 653 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 TRIM67Q6ZTA4 783 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 CYP4X1Q8N118 509 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
PCM1-220ENST00000523896 IL27Q8NEV9 243 aa8.12□□□□□ -1.11
PCM1-220ENST00000523896 PLEKHG3A1L390 1219 aa8.11□□□□□ -1.11
PCM1-220ENST00000523896 RSBN1LQ6PCB5 846 aaPredicted RBP8.11□□□□□ -1.11
PCM1-220ENST00000523896 PRR7Q8TB68 274 aa8.11□□□□□ -1.11
PCM1-220ENST00000523896 ZBTB3Q9H5J0 574 aa8.11□□□□□ -1.11
PCM1-220ENST00000523896 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
PCM1-220ENST00000523896 CCNYL3P0C7X3 344 aa8.1□□□□□ -1.11
PCM1-220ENST00000523896 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
PCM1-220ENST00000523896 SPTLC1O15269 473 aa8.09□□□□□ -1.11
PCM1-220ENST00000523896 PTPRNQ16849 979 aa8.09□□□□□ -1.11
PCM1-220ENST00000523896 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
PCM1-220ENST00000523896 PKD2L1Q9P0L9 805 aa8.09□□□□□ -1.11
PCM1-220ENST00000523896 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
PCM1-220ENST00000523896 NUTM2BA6NNL0 878 aaPredicted RBP8.08□□□□□ -1.12
PCM1-220ENST00000523896 NUTM2EB1AL46 878 aaPredicted RBP8.08□□□□□ -1.12
PCM1-220ENST00000523896 WNT7AO00755 349 aa8.08□□□□□ -1.12
PCM1-220ENST00000523896 WNT7BP56706 349 aa8.08□□□□□ -1.12
PCM1-220ENST00000523896 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
PCM1-220ENST00000523896 NUTM2DQ5VT03 806 aaPredicted RBP8.08□□□□□ -1.12
PCM1-220ENST00000523896 NUTM2AQ8IVF1 878 aaPredicted RBP8.08□□□□□ -1.12
PCM1-220ENST00000523896 ATP1B4Q9UN42 357 aaPredicted RBP8.08□□□□□ -1.12
PCM1-220ENST00000523896 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
PCM1-220ENST00000523896 DESI1Q6ICB0 168 aa8.07□□□□□ -1.12
PCM1-220ENST00000523896 TSC1Q92574 1164 aa8.06□□□□□ -1.12
PCM1-220ENST00000523896 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
PCM1-220ENST00000523896 HRCP23327 699 aa8.05□□□□□ -1.12
PCM1-220ENST00000523896 CTHP32929 405 aa8.05□□□□□ -1.12
PCM1-220ENST00000523896 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
PCM1-220ENST00000523896 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
PCM1-220ENST00000523896 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
PCM1-220ENST00000523896 MYT1Q01538 1121 aa8.04□□□□□ -1.12
PCM1-220ENST00000523896 EHBP1Q8NDI1 1231 aa8.04□□□□□ -1.12
PCM1-220ENST00000523896 MRGPRX2Q96LB1 330 aa8.04□□□□□ -1.12
PCM1-220ENST00000523896 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
PCM1-220ENST00000523896 PCDHB15Q9Y5E8 787 aa8.04□□□□□ -1.12
PCM1-220ENST00000523896 KCNH2Q12809 1159 aa8.03□□□□□ -1.12
PCM1-220ENST00000523896 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
PCM1-220ENST00000523896 RC3H1Q5TC82 1133 aaKnown RBP8.03□□□□□ -1.12
PCM1-220ENST00000523896 ZNF787Q6DD87 383 aa8.03□□□□□ -1.12
PCM1-220ENST00000523896 HELBQ8NG08 1087 aaPredicted RBP8.03□□□□□ -1.12
PCM1-220ENST00000523896 UNC93B1Q9H1C4 597 aa8.03□□□□□ -1.12
PCM1-220ENST00000523896 EVA1BQ9NVM1 165 aa8.03□□□□□ -1.12
PCM1-220ENST00000523896 TUSC1Q2TAM9 212 aa8.02□□□□□ -1.13
PCM1-220ENST00000523896 CABLES1Q8TDN4 633 aa8.02□□□□□ -1.13
PCM1-220ENST00000523896 LCE2BO14633 110 aa8.01□□□□□ -1.13
PCM1-220ENST00000523896 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
PCM1-220ENST00000523896 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
PCM1-220ENST00000523896 LIMD1Q9UGP4 676 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms