RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
ERGIC1-211ENST00000523215 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
ERGIC1-211ENST00000523215 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
ERGIC1-211ENST00000523215 YEATS2Q9ULM3 1422 aa13.96□□□□□ -0.17
ERGIC1-211ENST00000523215 RGPD1P0DJD0 1748 aa13.96□□□□□ -0.17
ERGIC1-211ENST00000523215 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
ERGIC1-211ENST00000523215 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
ERGIC1-211ENST00000523215 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
ERGIC1-211ENST00000523215 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
ERGIC1-211ENST00000523215 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
ERGIC1-211ENST00000523215 ST20-MTHFSA0A0A6YYL1 179 aa13.94□□□□□ -0.18
ERGIC1-211ENST00000523215 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
ERGIC1-211ENST00000523215 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
ERGIC1-211ENST00000523215 NEO1Q92859 1461 aa13.93□□□□□ -0.18
ERGIC1-211ENST00000523215 PLEKHH1Q9ULM0 1364 aa13.93□□□□□ -0.18
ERGIC1-211ENST00000523215 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
ERGIC1-211ENST00000523215 PPP6R1Q9UPN7 881 aa13.92□□□□□ -0.18
ERGIC1-211ENST00000523215 BACH2Q9BYV9 841 aa13.92□□□□□ -0.18
ERGIC1-211ENST00000523215 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
ERGIC1-211ENST00000523215 ZNF326Q5BKZ1 582 aaKnown RBP13.92□□□□□ -0.18
ERGIC1-211ENST00000523215 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
ERGIC1-211ENST00000523215 CARD11Q9BXL7 1154 aa13.91□□□□□ -0.18
ERGIC1-211ENST00000523215 AGLP35573 1532 aa13.91□□□□□ -0.18
ERGIC1-211ENST00000523215 ASXL2Q76L83 1435 aa13.9□□□□□ -0.18
ERGIC1-211ENST00000523215 C3P01024 1663 aa13.9□□□□□ -0.18
ERGIC1-211ENST00000523215 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
ERGIC1-211ENST00000523215 CD163L1Q9NR16 1453 aa13.89□□□□□ -0.19
ERGIC1-211ENST00000523215 PPIP5K1Q6PFW1 1433 aa13.89□□□□□ -0.19
ERGIC1-211ENST00000523215 NSD2O96028 1365 aa13.88□□□□□ -0.19
ERGIC1-211ENST00000523215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.88□□□□□ -0.19
ERGIC1-211ENST00000523215 PTPRMP28827 1452 aa13.87□□□□□ -0.19
ERGIC1-211ENST00000523215 ITSN1Q15811 1721 aa13.87□□□□□ -0.19
ERGIC1-211ENST00000523215 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
ERGIC1-211ENST00000523215 SPATA31D1Q6ZQQ2 1576 aa13.87□□□□□ -0.19
ERGIC1-211ENST00000523215 KDM2AQ9Y2K7 1162 aa13.87□□□□□ -0.19
ERGIC1-211ENST00000523215 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
ERGIC1-211ENST00000523215 DUSP27Q5VZP5 1158 aa13.86□□□□□ -0.19
ERGIC1-211ENST00000523215 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-211ENST00000523215 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
ERGIC1-211ENST00000523215 MARF1Q9Y4F3 1742 aaKnown RBP13.85□□□□□ -0.19
ERGIC1-211ENST00000523215 NCOA3Q9Y6Q9 1424 aa13.83□□□□□ -0.2
ERGIC1-211ENST00000523215 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.2
ERGIC1-211ENST00000523215 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
ERGIC1-211ENST00000523215 NPATQ14207 1427 aa13.82□□□□□ -0.2
ERGIC1-211ENST00000523215 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
ERGIC1-211ENST00000523215 CPS1P31327 1500 aa13.81□□□□□ -0.2
ERGIC1-211ENST00000523215 RCAN3Q9UKA8 241 aa13.81□□□□□ -0.2
ERGIC1-211ENST00000523215 DLG5Q8TDM6 1919 aa13.8□□□□□ -0.2
ERGIC1-211ENST00000523215 PNPLA6Q8IY17 1366 aa13.79□□□□□ -0.2
ERGIC1-211ENST00000523215 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
ERGIC1-211ENST00000523215 USP19O94966 1318 aa13.79□□□□□ -0.2
ERGIC1-211ENST00000523215 CRYBG1Q9Y4K1 1723 aa13.79□□□□□ -0.2
ERGIC1-211ENST00000523215 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
ERGIC1-211ENST00000523215 SLFN5Q08AF3 891 aa13.78□□□□□ -0.2
ERGIC1-211ENST00000523215 PLCB2Q00722 1185 aa13.77□□□□□ -0.2
ERGIC1-211ENST00000523215 FMN2Q9NZ56 1722 aa13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 IGSF3O75054 1194 aa13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 PPP2R1AP30153 589 aa13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 C8orf34Q49A92 452 aa13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.21
ERGIC1-211ENST00000523215 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
ERGIC1-211ENST00000523215 POLR3GLQ9BT43 218 aa13.76□□□□□ -0.21
ERGIC1-211ENST00000523215 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
ERGIC1-211ENST00000523215 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
ERGIC1-211ENST00000523215 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
ERGIC1-211ENST00000523215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERGIC1-211ENST00000523215 PIK3R4Q99570 1358 aa13.74□□□□□ -0.21
ERGIC1-211ENST00000523215 TMF1P82094 1093 aa13.73□□□□□ -0.21
ERGIC1-211ENST00000523215 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
ERGIC1-211ENST00000523215 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
ERGIC1-211ENST00000523215 EFCAB2Q5VUJ9 269 aa13.72□□□□□ -0.21
ERGIC1-211ENST00000523215 ABCC11Q96J66 1382 aa13.72□□□□□ -0.21
ERGIC1-211ENST00000523215 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
ERGIC1-211ENST00000523215 ALKQ9UM73 1620 aa13.71□□□□□ -0.21
ERGIC1-211ENST00000523215 PDE4AP27815 886 aa13.71□□□□□ -0.21
ERGIC1-211ENST00000523215 TECPR2O15040 1411 aa13.71□□□□□ -0.21
ERGIC1-211ENST00000523215 CFAP65Q6ZU64 1925 aaKnown RBP13.71□□□□□ -0.22
ERGIC1-211ENST00000523215 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.22
ERGIC1-211ENST00000523215 ATP7BP35670 1465 aa13.71□□□□□ -0.22
ERGIC1-211ENST00000523215 EXOC6Q8TAG9 804 aa13.7□□□□□ -0.22
ERGIC1-211ENST00000523215 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
ERGIC1-211ENST00000523215 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
ERGIC1-211ENST00000523215 PDE3AQ14432 1141 aa13.69□□□□□ -0.22
ERGIC1-211ENST00000523215 PANK3Q9H999 370 aa13.69□□□□□ -0.22
ERGIC1-211ENST00000523215 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
ERGIC1-211ENST00000523215 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
ERGIC1-211ENST00000523215 SPAG9O60271 1321 aaKnown RBP13.68□□□□□ -0.22
ERGIC1-211ENST00000523215 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
ERGIC1-211ENST00000523215 CDK11BP21127 795 aaKnown RBP13.67□□□□□ -0.22
ERGIC1-211ENST00000523215 BCCIPQ9P287 314 aaKnown RBP eCLIP13.67□□□□□ -0.22
ERGIC1-211ENST00000523215 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
ERGIC1-211ENST00000523215 HSP90B1P14625 803 aaKnown RBP13.66□□□□□ -0.22
ERGIC1-211ENST00000523215 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
ERGIC1-211ENST00000523215 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
ERGIC1-211ENST00000523215 UBR1Q8IWV7 1749 aa13.66□□□□□ -0.22
ERGIC1-211ENST00000523215 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
ERGIC1-211ENST00000523215 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms