RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
CSNK1A1-208ENST00000523203 STK26Q9P289 416 aa15.26■□□□□ 0.03
CSNK1A1-208ENST00000523203 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
CSNK1A1-208ENST00000523203 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
CSNK1A1-208ENST00000523203 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
CSNK1A1-208ENST00000523203 RGS12O14924 1447 aa15.24■□□□□ 0.03
CSNK1A1-208ENST00000523203 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
CSNK1A1-208ENST00000523203 WAPLQ7Z5K2 1190 aa15.23■□□□□ 0.03
CSNK1A1-208ENST00000523203 USP21Q9UK80 565 aa15.23■□□□□ 0.03
CSNK1A1-208ENST00000523203 SPATA31E1Q6ZUB1 1445 aa15.22■□□□□ 0.03
CSNK1A1-208ENST00000523203 IFT172Q9UG01 1749 aa15.22■□□□□ 0.03
CSNK1A1-208ENST00000523203 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
CSNK1A1-208ENST00000523203 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 FOXO3O43524 673 aa15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 TMEM132EQ6IEE7 984 aa15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 FNBP4Q8N3X1 1017 aaPredicted RBP15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
CSNK1A1-208ENST00000523203 TECPR2O15040 1411 aa15.2■□□□□ 0.02
CSNK1A1-208ENST00000523203 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
CSNK1A1-208ENST00000523203 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
CSNK1A1-208ENST00000523203 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
CSNK1A1-208ENST00000523203 PXDNQ92626 1479 aa15.19■□□□□ 0.02
CSNK1A1-208ENST00000523203 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
CSNK1A1-208ENST00000523203 KNDC1Q76NI1 1749 aa15.18■□□□□ 0.02
CSNK1A1-208ENST00000523203 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 MARF1Q9Y4F3 1742 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 MYOM2P54296 1465 aa15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 ATRNO75882 1429 aa15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1-208ENST00000523203 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
CSNK1A1-208ENST00000523203 FMN2Q9NZ56 1722 aa15.15■□□□□ 0.02
CSNK1A1-208ENST00000523203 RAB3GAP2Q9H2M9 1393 aa15.15■□□□□ 0.02
CSNK1A1-208ENST00000523203 SIRT1Q96EB6 747 aa15.15■□□□□ 0.02
CSNK1A1-208ENST00000523203 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
CSNK1A1-208ENST00000523203 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
CSNK1A1-208ENST00000523203 KIF1AQ12756 1690 aa15.13■□□□□ 0.01
CSNK1A1-208ENST00000523203 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
CSNK1A1-208ENST00000523203 BCL9LQ86UU0 1499 aa15.13■□□□□ 0.01
CSNK1A1-208ENST00000523203 CFAP70Q5T0N1 1121 aa15.12■□□□□ 0.01
CSNK1A1-208ENST00000523203 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
CSNK1A1-208ENST00000523203 SPATA31A3Q5VYP0 1347 aa15.12■□□□□ 0.01
CSNK1A1-208ENST00000523203 GJD4Q96KN9 370 aaPredicted RBP15.11■□□□□ 0.01
CSNK1A1-208ENST00000523203 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
CSNK1A1-208ENST00000523203 EP400Q96L91 3159 aa15.11■□□□□ 0.01
CSNK1A1-208ENST00000523203 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
CSNK1A1-208ENST00000523203 PSME1Q06323 249 aa15.1■□□□□ 0.01
CSNK1A1-208ENST00000523203 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
CSNK1A1-208ENST00000523203 UNC5CLQ8IV45 518 aa15.09■□□□□ 0.01
CSNK1A1-208ENST00000523203 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
CSNK1A1-208ENST00000523203 POGKQ9P215 609 aa15.09■□□□□ 0.01
CSNK1A1-208ENST00000523203 NRXN1Q9ULB1 1477 aa15.08■□□□□ 0.01
CSNK1A1-208ENST00000523203 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
CSNK1A1-208ENST00000523203 LMOD2Q6P5Q4 547 aa15.07■□□□□ 0
CSNK1A1-208ENST00000523203 CCDC125Q86Z20 511 aa15.07■□□□□ 0
CSNK1A1-208ENST00000523203 PLEKHG5O94827 1062 aa15.06■□□□□ 0
CSNK1A1-208ENST00000523203 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
CSNK1A1-208ENST00000523203 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
CSNK1A1-208ENST00000523203 SLIT2O94813 1529 aa15.06■□□□□ 0
CSNK1A1-208ENST00000523203 USP32Q8NFA0 1604 aa15.06■□□□□ 0
CSNK1A1-208ENST00000523203 SRCAPQ6ZRS2 3230 aa15.05■□□□□ -0
CSNK1A1-208ENST00000523203 RALGAPBQ86X10 1494 aa15.04■□□□□ -0
CSNK1A1-208ENST00000523203 SBNO1A3KN83 1393 aa15.04■□□□□ -0
CSNK1A1-208ENST00000523203 CABLES1Q8TDN4 633 aa15.04■□□□□ -0
CSNK1A1-208ENST00000523203 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CSNK1A1-208ENST00000523203 DLC1Q96QB1 1528 aa15.03■□□□□ -0
CSNK1A1-208ENST00000523203 ARHGEF10O15013 1369 aa15.03■□□□□ -0
CSNK1A1-208ENST00000523203 PMFBP1Q8TBY8 1022 aa15.03■□□□□ -0
CSNK1A1-208ENST00000523203 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
CSNK1A1-208ENST00000523203 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
CSNK1A1-208ENST00000523203 GLI3P10071 1580 aa15.02■□□□□ -0
CSNK1A1-208ENST00000523203 BRWD3Q6RI45 1802 aa15.02■□□□□ -0
CSNK1A1-208ENST00000523203 CCDC9Q9Y3X0 531 aaKnown RBP15.02■□□□□ -0
CSNK1A1-208ENST00000523203 ANKARQ7Z5J8 1434 aa15.01□□□□□ -0.01
CSNK1A1-208ENST00000523203 NWD2Q9ULI1 1742 aa15.01□□□□□ -0.01
CSNK1A1-208ENST00000523203 VPS72Q15906 364 aa15.01□□□□□ -0.01
CSNK1A1-208ENST00000523203 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
CSNK1A1-208ENST00000523203 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
CSNK1A1-208ENST00000523203 ABCA3Q99758 1704 aa15□□□□□ -0.01
CSNK1A1-208ENST00000523203 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
CSNK1A1-208ENST00000523203 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
CSNK1A1-208ENST00000523203 ADGRB2O60241 1585 aa14.99□□□□□ -0.01
CSNK1A1-208ENST00000523203 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
CSNK1A1-208ENST00000523203 SEPT12Q8IYM1 358 aa14.99□□□□□ -0.01
CSNK1A1-208ENST00000523203 STAC3Q96MF2 364 aa14.99□□□□□ -0.01
CSNK1A1-208ENST00000523203 EIF3AQ14152 1382 aaKnown RBP14.98□□□□□ -0.01
CSNK1A1-208ENST00000523203 GPRASP1Q5JY77 1395 aa14.98□□□□□ -0.01
CSNK1A1-208ENST00000523203 FAM83GA6ND36 823 aa14.98□□□□□ -0.01
CSNK1A1-208ENST00000523203 SF3B2Q13435 895 aaKnown RBP14.98□□□□□ -0.01
CSNK1A1-208ENST00000523203 HRCP23327 699 aa14.97□□□□□ -0.01
CSNK1A1-208ENST00000523203 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
CSNK1A1-208ENST00000523203 WASLO00401 505 aaPredicted RBP14.96□□□□□ -0.01
CSNK1A1-208ENST00000523203 ONECUT3O60422 494 aaPredicted RBP14.96□□□□□ -0.01
CSNK1A1-208ENST00000523203 NGDNQ8NEJ9 315 aaKnown RBP14.96□□□□□ -0.01
CSNK1A1-208ENST00000523203 TRPM3Q9HCF6 1732 aaPredicted RBP14.96□□□□□ -0.01
CSNK1A1-208ENST00000523203 A0A0G2JS52 829 aa14.95□□□□□ -0.02
CSNK1A1-208ENST00000523203 MYT1Q01538 1121 aa14.95□□□□□ -0.02
CSNK1A1-208ENST00000523203 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
CSNK1A1-208ENST00000523203 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms