RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 COL22A1Q8NFW1 1626 aaPredicted RBP14.11□□□□□ -0.15
SDC2-207ENST00000522911 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
SDC2-207ENST00000522911 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
SDC2-207ENST00000522911 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
SDC2-207ENST00000522911 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
SDC2-207ENST00000522911 MYOM2P54296 1465 aa14.09□□□□□ -0.15
SDC2-207ENST00000522911 RGS12O14924 1447 aa14.08□□□□□ -0.15
SDC2-207ENST00000522911 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
SDC2-207ENST00000522911 SIRT1Q96EB6 747 aa14.08□□□□□ -0.16
SDC2-207ENST00000522911 C8orf37Q96NL8 207 aa14.08□□□□□ -0.16
SDC2-207ENST00000522911 ADGRF5Q8IZF2 1346 aa14.08□□□□□ -0.16
SDC2-207ENST00000522911 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
SDC2-207ENST00000522911 PXDNQ92626 1479 aa14.07□□□□□ -0.16
SDC2-207ENST00000522911 NGLY1Q96IV0 654 aa14.07□□□□□ -0.16
SDC2-207ENST00000522911 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
SDC2-207ENST00000522911 KNDC1Q76NI1 1749 aa14.07□□□□□ -0.16
SDC2-207ENST00000522911 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
SDC2-207ENST00000522911 NRXN1Q9ULB1 1477 aa14.06□□□□□ -0.16
SDC2-207ENST00000522911 EP400Q96L91 3159 aa14.05□□□□□ -0.16
SDC2-207ENST00000522911 TRPC5Q9UL62 973 aaPredicted RBP14.04□□□□□ -0.16
SDC2-207ENST00000522911 ATRNO75882 1429 aa14.04□□□□□ -0.16
SDC2-207ENST00000522911 USP21Q9UK80 565 aa14.03□□□□□ -0.16
SDC2-207ENST00000522911 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
SDC2-207ENST00000522911 ADAMTS2O95450 1211 aa14.02□□□□□ -0.17
SDC2-207ENST00000522911 ESCO1Q5FWF5 840 aa14.02□□□□□ -0.17
SDC2-207ENST00000522911 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
SDC2-207ENST00000522911 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
SDC2-207ENST00000522911 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
SDC2-207ENST00000522911 FOXO3O43524 673 aa14□□□□□ -0.17
SDC2-207ENST00000522911 RGL3Q3MIN7 710 aa14□□□□□ -0.17
SDC2-207ENST00000522911 WAPLQ7Z5K2 1190 aa14□□□□□ -0.17
SDC2-207ENST00000522911 FMN2Q9NZ56 1722 aa14□□□□□ -0.17
SDC2-207ENST00000522911 KIF1AQ12756 1690 aa14□□□□□ -0.17
SDC2-207ENST00000522911 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
SDC2-207ENST00000522911 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.98□□□□□ -0.17
SDC2-207ENST00000522911 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
SDC2-207ENST00000522911 TMEM132EQ6IEE7 984 aa13.98□□□□□ -0.17
SDC2-207ENST00000522911 SLIT2O94813 1529 aa13.98□□□□□ -0.17
SDC2-207ENST00000522911 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
SDC2-207ENST00000522911 DHX57Q6P158 1386 aaKnown RBP13.97□□□□□ -0.17
SDC2-207ENST00000522911 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
SDC2-207ENST00000522911 CCDC125Q86Z20 511 aa13.97□□□□□ -0.17
SDC2-207ENST00000522911 STK26Q9P289 416 aa13.97□□□□□ -0.17
SDC2-207ENST00000522911 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
SDC2-207ENST00000522911 SBNO1A3KN83 1393 aa13.96□□□□□ -0.18
SDC2-207ENST00000522911 GJD4Q96KN9 370 aaPredicted RBP13.95□□□□□ -0.18
SDC2-207ENST00000522911 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
SDC2-207ENST00000522911 TNS3Q68CZ2 1445 aa13.94□□□□□ -0.18
SDC2-207ENST00000522911 ANKARQ7Z5J8 1434 aa13.94□□□□□ -0.18
SDC2-207ENST00000522911 MSH5O43196 834 aa13.93□□□□□ -0.18
SDC2-207ENST00000522911 PSME1Q06323 249 aa13.93□□□□□ -0.18
SDC2-207ENST00000522911 KRT28Q7Z3Y7 464 aa13.93□□□□□ -0.18
SDC2-207ENST00000522911 UNC5CLQ8IV45 518 aa13.93□□□□□ -0.18
SDC2-207ENST00000522911 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
SDC2-207ENST00000522911 ADGRB1O14514 1584 aa13.92□□□□□ -0.18
SDC2-207ENST00000522911 CFAP70Q5T0N1 1121 aa13.92□□□□□ -0.18
SDC2-207ENST00000522911 PHF8Q9UPP1 1060 aa13.92□□□□□ -0.18
SDC2-207ENST00000522911 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
SDC2-207ENST00000522911 HRCP23327 699 aa13.91□□□□□ -0.18
SDC2-207ENST00000522911 XPCQ01831 940 aaPredicted RBP13.91□□□□□ -0.18
SDC2-207ENST00000522911 NUTM2FA1L443 756 aa13.9□□□□□ -0.18
SDC2-207ENST00000522911 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
SDC2-207ENST00000522911 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
SDC2-207ENST00000522911 RALGAPBQ86X10 1494 aa13.9□□□□□ -0.18
SDC2-207ENST00000522911 GLI3P10071 1580 aa13.89□□□□□ -0.19
SDC2-207ENST00000522911 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
SDC2-207ENST00000522911 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
SDC2-207ENST00000522911 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
SDC2-207ENST00000522911 VPS72Q15906 364 aa13.88□□□□□ -0.19
SDC2-207ENST00000522911 BLMP54132 1417 aaPredicted RBP13.87□□□□□ -0.19
SDC2-207ENST00000522911 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
SDC2-207ENST00000522911 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
SDC2-207ENST00000522911 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
SDC2-207ENST00000522911 RGPD8O14715 1765 aaPredicted RBP13.85□□□□□ -0.19
SDC2-207ENST00000522911 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
SDC2-207ENST00000522911 POGKQ9P215 609 aa13.84□□□□□ -0.19
SDC2-207ENST00000522911 TRPM3Q9HCF6 1732 aaPredicted RBP13.84□□□□□ -0.19
SDC2-207ENST00000522911 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
SDC2-207ENST00000522911 ALS2Q96Q42 1657 aa13.82□□□□□ -0.2
SDC2-207ENST00000522911 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
SDC2-207ENST00000522911 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
SDC2-207ENST00000522911 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
SDC2-207ENST00000522911 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
SDC2-207ENST00000522911 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
SDC2-207ENST00000522911 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
SDC2-207ENST00000522911 HAP1P54257 671 aaPredicted RBP13.8□□□□□ -0.2
SDC2-207ENST00000522911 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
SDC2-207ENST00000522911 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
SDC2-207ENST00000522911 TRAK1Q9UPV9 953 aa13.8□□□□□ -0.2
SDC2-207ENST00000522911 ADRA2BP18089 450 aa13.79□□□□□ -0.2
SDC2-207ENST00000522911 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
SDC2-207ENST00000522911 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
SDC2-207ENST00000522911 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
SDC2-207ENST00000522911 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
SDC2-207ENST00000522911 ATP7BP35670 1465 aa13.78□□□□□ -0.2
SDC2-207ENST00000522911 BRWD3Q6RI45 1802 aa13.78□□□□□ -0.2
SDC2-207ENST00000522911 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
SDC2-207ENST00000522911 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
SDC2-207ENST00000522911 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
SDC2-207ENST00000522911 POLR3AO14802 1390 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms