RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
PABPC1-220ENST00000522658 ZNF518AQ6AHZ1 1483 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 ARHGAP5Q13017 1502 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 EFCAB2Q5VUJ9 269 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 DDX12PQ92771 950 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 PREX1Q8TCU6 1659 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 PLCH2O75038 1416 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
PABPC1-220ENST00000522658 ATP10AO60312 1499 aa10.23□□□□□ -0.77
PABPC1-220ENST00000522658 TRIM6-TRIM34B2RNG4 842 aa10.23□□□□□ -0.77
PABPC1-220ENST00000522658 AMER1Q5JTC6 1135 aaPredicted RBP10.23□□□□□ -0.77
PABPC1-220ENST00000522658 ANKK1Q8NFD2 765 aa10.23□□□□□ -0.77
PABPC1-220ENST00000522658 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
PABPC1-220ENST00000522658 EN1Q05925 392 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-220ENST00000522658 RBM33Q96EV2 1170 aaKnown RBP10.22□□□□□ -0.77
PABPC1-220ENST00000522658 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
PABPC1-220ENST00000522658 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
PABPC1-220ENST00000522658 ARIH1Q9Y4X5 557 aaPredicted RBP10.21□□□□□ -0.77
PABPC1-220ENST00000522658 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.78
PABPC1-220ENST00000522658 SPDYE16A6NNV3 312 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-220ENST00000522658 BCAMP50895 628 aa10.2□□□□□ -0.78
PABPC1-220ENST00000522658 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
PABPC1-220ENST00000522658 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
PABPC1-220ENST00000522658 A0A0G2JS52 829 aa10.19□□□□□ -0.78
PABPC1-220ENST00000522658 RGS20O76081 388 aa10.19□□□□□ -0.78
PABPC1-220ENST00000522658 NBR1Q14596 966 aa10.19□□□□□ -0.78
PABPC1-220ENST00000522658 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
PABPC1-220ENST00000522658 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
PABPC1-220ENST00000522658 SIGLEC1Q9BZZ2 1709 aa10.19□□□□□ -0.78
PABPC1-220ENST00000522658 TROQ12816 1431 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-220ENST00000522658 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
PABPC1-220ENST00000522658 ITGBL1O95965 494 aaPredicted RBP10.18□□□□□ -0.78
PABPC1-220ENST00000522658 E2F4Q16254 413 aa10.18□□□□□ -0.78
PABPC1-220ENST00000522658 PRIM1P49642 420 aaKnown RBP10.16□□□□□ -0.78
PABPC1-220ENST00000522658 FAM98CQ17RN3 349 aaKnown RBP10.16□□□□□ -0.78
PABPC1-220ENST00000522658 TSKSQ9UJT2 592 aa10.16□□□□□ -0.78
PABPC1-220ENST00000522658 KDM5CP41229 1560 aa10.16□□□□□ -0.78
PABPC1-220ENST00000522658 CCDC18Q5T9S5 1454 aa10.16□□□□□ -0.78
PABPC1-220ENST00000522658 DIP2CQ9Y2E4 1556 aa10.15□□□□□ -0.78
PABPC1-220ENST00000522658 CEBPAP49715 358 aaPredicted RBP10.15□□□□□ -0.78
PABPC1-220ENST00000522658 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
PABPC1-220ENST00000522658 ARHGAP35Q9NRY4 1499 aa10.15□□□□□ -0.78
PABPC1-220ENST00000522658 MAP3K7O43318 606 aa10.14□□□□□ -0.79
PABPC1-220ENST00000522658 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
PABPC1-220ENST00000522658 WBP1LQ9NX94 342 aa10.14□□□□□ -0.79
PABPC1-220ENST00000522658 CNTLNQ9NXG0 1405 aa10.14□□□□□ -0.79
PABPC1-220ENST00000522658 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
PABPC1-220ENST00000522658 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
PABPC1-220ENST00000522658 CFAP44Q96MT7 982 aa10.13□□□□□ -0.79
PABPC1-220ENST00000522658 PREX2Q70Z35 1606 aa10.13□□□□□ -0.79
PABPC1-220ENST00000522658 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
PABPC1-220ENST00000522658 ABCC1P33527 1531 aa10.12□□□□□ -0.79
PABPC1-220ENST00000522658 SPATA31D1Q6ZQQ2 1576 aa10.12□□□□□ -0.79
PABPC1-220ENST00000522658 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
PABPC1-220ENST00000522658 FAM198AQ9UFP1 575 aa10.11□□□□□ -0.79
PABPC1-220ENST00000522658 C3P01024 1663 aa10.11□□□□□ -0.79
PABPC1-220ENST00000522658 ITSN2Q9NZM3 1697 aa10.11□□□□□ -0.79
PABPC1-220ENST00000522658 PTPRTO14522 1441 aa10.1□□□□□ -0.79
PABPC1-220ENST00000522658 TRAPPC8Q9Y2L5 1435 aa10.1□□□□□ -0.79
PABPC1-220ENST00000522658 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
PABPC1-220ENST00000522658 CDCA7LQ96GN5 454 aa10.1□□□□□ -0.79
PABPC1-220ENST00000522658 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
PABPC1-220ENST00000522658 AGLP35573 1532 aa10.1□□□□□ -0.79
PABPC1-220ENST00000522658 PRSS12P56730 875 aa10.09□□□□□ -0.79
PABPC1-220ENST00000522658 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.09□□□□□ -0.79
PABPC1-220ENST00000522658 TSR3Q9UJK0 312 aaKnown RBP10.09□□□□□ -0.79
PABPC1-220ENST00000522658 CDC42BPBQ9Y5S2 1711 aa10.09□□□□□ -0.79
PABPC1-220ENST00000522658 STRCQ7RTU9 1775 aa10.09□□□□□ -0.79
PABPC1-220ENST00000522658 SETD1BQ9UPS6 1966 aaKnown RBP10.08□□□□□ -0.8
PABPC1-220ENST00000522658 OSBPP22059 807 aa10.08□□□□□ -0.8
PABPC1-220ENST00000522658 LRCH3Q96II8 777 aa10.08□□□□□ -0.8
PABPC1-220ENST00000522658 WDR70Q9NW82 654 aa10.08□□□□□ -0.8
PABPC1-220ENST00000522658 CASKIN1Q8WXD9 1431 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 IQSEC2Q5JU85 1478 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 FYCO1Q9BQS8 1478 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 GRXCR2A6NFK2 248 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 C3orf80F5H4A9 247 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 HPS5Q9UPZ3 1129 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
PABPC1-220ENST00000522658 SPAG9O60271 1321 aaKnown RBP10.07□□□□□ -0.8
PABPC1-220ENST00000522658 CAMSAP1Q5T5Y3 1602 aa10.06□□□□□ -0.8
PABPC1-220ENST00000522658 NPATQ14207 1427 aa10.06□□□□□ -0.8
PABPC1-220ENST00000522658 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
PABPC1-220ENST00000522658 MROH2AA6NES4 1674 aa10.06□□□□□ -0.8
PABPC1-220ENST00000522658 PLEKHH2Q8IVE3 1493 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 LRRIQ1Q96JM4 1722 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 SMAPO00193 183 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 SOCS7O14512 581 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
PABPC1-220ENST00000522658 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
PABPC1-220ENST00000522658 SUPT6HQ7KZ85 1726 aaKnown RBP10.04□□□□□ -0.8
PABPC1-220ENST00000522658 KIDINS220Q9ULH0 1771 aa10.04□□□□□ -0.8
PABPC1-220ENST00000522658 ATP7AQ04656 1500 aa10.04□□□□□ -0.8
PABPC1-220ENST00000522658 KCNC4Q03721 635 aa10.04□□□□□ -0.8
PABPC1-220ENST00000522658 MTUS2Q5JR59 1369 aa10.03□□□□□ -0.8
PABPC1-220ENST00000522658 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
PABPC1-220ENST00000522658 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
PABPC1-220ENST00000522658 SAMD7Q7Z3H4 446 aa10.02□□□□□ -0.81
PABPC1-220ENST00000522658 TATDN2Q93075 761 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms