RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
HMBOX1-209ENST00000522468 COL22A1Q8NFW1 1626 aaPredicted RBP21■□□□□ 0.95
HMBOX1-209ENST00000522468 AFF2P51816 1311 aa21■□□□□ 0.95
HMBOX1-209ENST00000522468 NRXN1Q9ULB1 1477 aa21■□□□□ 0.95
HMBOX1-209ENST00000522468 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
HMBOX1-209ENST00000522468 ACIN1Q9UKV3 1341 aaKnown RBP20.99■□□□□ 0.95
HMBOX1-209ENST00000522468 PXDNQ92626 1479 aa20.97■□□□□ 0.95
HMBOX1-209ENST00000522468 FMN2Q9NZ56 1722 aa20.96■□□□□ 0.95
HMBOX1-209ENST00000522468 PLEKHH1Q9ULM0 1364 aa20.96■□□□□ 0.95
HMBOX1-209ENST00000522468 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.95
HMBOX1-209ENST00000522468 MYOM2P54296 1465 aa20.95■□□□□ 0.94
HMBOX1-209ENST00000522468 RXRBP28702 533 aa20.95■□□□□ 0.94
HMBOX1-209ENST00000522468 TMEM132EQ6IEE7 984 aa20.95■□□□□ 0.94
HMBOX1-209ENST00000522468 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
HMBOX1-209ENST00000522468 C8orf37Q96NL8 207 aa20.93■□□□□ 0.94
HMBOX1-209ENST00000522468 STK26Q9P289 416 aa20.93■□□□□ 0.94
HMBOX1-209ENST00000522468 RAB3GAP2Q9H2M9 1393 aa20.93■□□□□ 0.94
HMBOX1-209ENST00000522468 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
HMBOX1-209ENST00000522468 NPHP3Q7Z494 1330 aa20.91■□□□□ 0.94
HMBOX1-209ENST00000522468 UPF1Q92900 1129 aaKnown RBP eCLIP20.91■□□□□ 0.944e-8■■■■□ 20.6
HMBOX1-209ENST00000522468 MARF1Q9Y4F3 1742 aaKnown RBP20.91■□□□□ 0.94
HMBOX1-209ENST00000522468 RGS12O14924 1447 aa20.9■□□□□ 0.94
HMBOX1-209ENST00000522468 ESCO1Q5FWF5 840 aa20.9■□□□□ 0.94
HMBOX1-209ENST00000522468 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
HMBOX1-209ENST00000522468 ADAMTS2O95450 1211 aa20.89■□□□□ 0.93
HMBOX1-209ENST00000522468 KIF1AQ12756 1690 aa20.89■□□□□ 0.93
HMBOX1-209ENST00000522468 RGPD8O14715 1765 aaPredicted RBP20.88■□□□□ 0.93
HMBOX1-209ENST00000522468 QTRT2Q9H974 415 aaKnown RBP20.88■□□□□ 0.93
HMBOX1-209ENST00000522468 RBM6P78332 1123 aaKnown RBP20.87■□□□□ 0.93
HMBOX1-209ENST00000522468 FOXO3O43524 673 aa20.86■□□□□ 0.93
HMBOX1-209ENST00000522468 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
HMBOX1-209ENST00000522468 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
HMBOX1-209ENST00000522468 NGLY1Q96IV0 654 aa20.86■□□□□ 0.93
HMBOX1-209ENST00000522468 ADGRB1O14514 1584 aa20.85■□□□□ 0.93
HMBOX1-209ENST00000522468 EP400Q96L91 3159 aa20.85■□□□□ 0.93
HMBOX1-209ENST00000522468 DLC1Q96QB1 1528 aa20.84■□□□□ 0.93
HMBOX1-209ENST00000522468 NUTM2FA1L443 756 aa20.83■□□□□ 0.93
HMBOX1-209ENST00000522468 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.93
HMBOX1-209ENST00000522468 DHX57Q6P158 1386 aaKnown RBP20.83■□□□□ 0.92
HMBOX1-209ENST00000522468 ATRNO75882 1429 aa20.82■□□□□ 0.92
HMBOX1-209ENST00000522468 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
HMBOX1-209ENST00000522468 BCL9LQ86UU0 1499 aa20.81■□□□□ 0.92
HMBOX1-209ENST00000522468 ADGRB2O60241 1585 aa20.81■□□□□ 0.92
HMBOX1-209ENST00000522468 USP21Q9UK80 565 aa20.81■□□□□ 0.92
HMBOX1-209ENST00000522468 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
HMBOX1-209ENST00000522468 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.79■□□□□ 0.92
HMBOX1-209ENST00000522468 TRPC5Q9UL62 973 aaPredicted RBP20.78■□□□□ 0.92
HMBOX1-209ENST00000522468 HRCP23327 699 aa20.77■□□□□ 0.92
HMBOX1-209ENST00000522468 PRAM1Q96QH2 718 aa20.77■□□□□ 0.92
HMBOX1-209ENST00000522468 ABCA3Q99758 1704 aa20.75■□□□□ 0.91
HMBOX1-209ENST00000522468 SLIT2O94813 1529 aa20.74■□□□□ 0.91
HMBOX1-209ENST00000522468 TNS3Q68CZ2 1445 aa20.74■□□□□ 0.91
HMBOX1-209ENST00000522468 KRT28Q7Z3Y7 464 aa20.74■□□□□ 0.91
HMBOX1-209ENST00000522468 ANKARQ7Z5J8 1434 aa20.74■□□□□ 0.91
HMBOX1-209ENST00000522468 PHF8Q9UPP1 1060 aa20.74■□□□□ 0.91
HMBOX1-209ENST00000522468 SRCAPQ6ZRS2 3230 aa20.72■□□□□ 0.91
HMBOX1-209ENST00000522468 SAFB2Q14151 953 aaKnown RBP eCLIP20.72■□□□□ 0.91
HMBOX1-209ENST00000522468 TRPM3Q9HCF6 1732 aaPredicted RBP20.72■□□□□ 0.91
HMBOX1-209ENST00000522468 GLI3P10071 1580 aa20.71■□□□□ 0.91
HMBOX1-209ENST00000522468 SBNO1A3KN83 1393 aa20.71■□□□□ 0.91
HMBOX1-209ENST00000522468 ARHGEF28Q8N1W1 1705 aaKnown RBP20.7■□□□□ 0.9
HMBOX1-209ENST00000522468 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
HMBOX1-209ENST00000522468 ATAD2Q6PL18 1390 aa20.69■□□□□ 0.9
HMBOX1-209ENST00000522468 PLCH1Q4KWH8 1693 aa20.68■□□□□ 0.9
HMBOX1-209ENST00000522468 NWD2Q9ULI1 1742 aa20.68■□□□□ 0.9
HMBOX1-209ENST00000522468 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
HMBOX1-209ENST00000522468 POGKQ9P215 609 aa20.68■□□□□ 0.9
HMBOX1-209ENST00000522468 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
HMBOX1-209ENST00000522468 ALS2Q96Q42 1657 aa20.67■□□□□ 0.9
HMBOX1-209ENST00000522468 GJD4Q96KN9 370 aaPredicted RBP20.67■□□□□ 0.9
HMBOX1-209ENST00000522468 TRAK1Q9UPV9 953 aa20.67■□□□□ 0.9
HMBOX1-209ENST00000522468 PSME1Q06323 249 aa20.66■□□□□ 0.9
HMBOX1-209ENST00000522468 UNC5CLQ8IV45 518 aa20.66■□□□□ 0.9
HMBOX1-209ENST00000522468 KDM2AQ9Y2K7 1162 aa20.66■□□□□ 0.9
HMBOX1-209ENST00000522468 PRR36Q9H6K5 1346 aa20.66■□□□□ 0.9
HMBOX1-209ENST00000522468 RALGAPBQ86X10 1494 aa20.66■□□□□ 0.9
HMBOX1-209ENST00000522468 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
HMBOX1-209ENST00000522468 HIRIP3Q9BW71 556 aaPredicted RBP20.64■□□□□ 0.89
HMBOX1-209ENST00000522468 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.89
HMBOX1-209ENST00000522468 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
HMBOX1-209ENST00000522468 PMFBP1Q8TBY8 1022 aa20.63■□□□□ 0.89
HMBOX1-209ENST00000522468 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
HMBOX1-209ENST00000522468 KIAA1210Q9ULL0 1709 aa20.63■□□□□ 0.89
HMBOX1-209ENST00000522468 EIF3AQ14152 1382 aaKnown RBP20.62■□□□□ 0.89
HMBOX1-209ENST00000522468 MINK1Q8N4C8 1332 aaPredicted RBP20.62■□□□□ 0.89
HMBOX1-209ENST00000522468 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
HMBOX1-209ENST00000522468 NRAPQ86VF7 1730 aa20.61■□□□□ 0.89
HMBOX1-209ENST00000522468 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
HMBOX1-209ENST00000522468 ATP7BP35670 1465 aa20.6■□□□□ 0.89
HMBOX1-209ENST00000522468 VPS72Q15906 364 aa20.57■□□□□ 0.88
HMBOX1-209ENST00000522468 TOPAZ1Q8N9V7 1692 aa20.57■□□□□ 0.88
HMBOX1-209ENST00000522468 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
HMBOX1-209ENST00000522468 FAM83GA6ND36 823 aa20.55■□□□□ 0.88
HMBOX1-209ENST00000522468 ONECUT3O60422 494 aaPredicted RBP20.55■□□□□ 0.88
HMBOX1-209ENST00000522468 LMOD2Q6P5Q4 547 aa20.55■□□□□ 0.88
HMBOX1-209ENST00000522468 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
HMBOX1-209ENST00000522468 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
HMBOX1-209ENST00000522468 CCDC125Q86Z20 511 aa20.53■□□□□ 0.88
HMBOX1-209ENST00000522468 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
HMBOX1-209ENST00000522468 NUDT16Q96DE0 195 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms