RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 STK26Q9P289 416 aa29.15■■■□□ 2.26
PABPC1-215ENST00000520804 AFF2P51816 1311 aa29.14■■■□□ 2.25
PABPC1-215ENST00000520804 ABCC11Q96J66 1382 aa29.13■■■□□ 2.25
PABPC1-215ENST00000520804 TMEM132EQ6IEE7 984 aa29.13■■■□□ 2.25
PABPC1-215ENST00000520804 KNDC1Q76NI1 1749 aa29.13■■■□□ 2.25
PABPC1-215ENST00000520804 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
PABPC1-215ENST00000520804 WAPLQ7Z5K2 1190 aa29.12■■■□□ 2.25
PABPC1-215ENST00000520804 RXRBP28702 533 aa29.1■■■□□ 2.25
PABPC1-215ENST00000520804 C8orf37Q96NL8 207 aa29.09■■■□□ 2.25
PABPC1-215ENST00000520804 ESCO1Q5FWF5 840 aa29.08■■■□□ 2.25
PABPC1-215ENST00000520804 YTHDC2Q9H6S0 1430 aaKnown RBP29.08■■■□□ 2.25
PABPC1-215ENST00000520804 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
PABPC1-215ENST00000520804 PLEKHH1Q9ULM0 1364 aa29.07■■■□□ 2.24
PABPC1-215ENST00000520804 MYOM2P54296 1465 aa29.06■■■□□ 2.24
PABPC1-215ENST00000520804 C14orf93Q9H972 538 aaKnown RBP29.06■■■□□ 2.24
PABPC1-215ENST00000520804 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
PABPC1-215ENST00000520804 NPHP3Q7Z494 1330 aa29.04■■■□□ 2.24
PABPC1-215ENST00000520804 ADAMTS2O95450 1211 aa29.03■■■□□ 2.24
PABPC1-215ENST00000520804 SIRT1Q96EB6 747 aa29.03■■■□□ 2.24
PABPC1-215ENST00000520804 COL22A1Q8NFW1 1626 aaPredicted RBP29.02■■■□□ 2.24
PABPC1-215ENST00000520804 CFAP70Q5T0N1 1121 aa29.01■■■□□ 2.23
PABPC1-215ENST00000520804 PXDNQ92626 1479 aa29.01■■■□□ 2.23
PABPC1-215ENST00000520804 NUTM2FA1L443 756 aa29■■■□□ 2.23
PABPC1-215ENST00000520804 NGLY1Q96IV0 654 aa29■■■□□ 2.23
PABPC1-215ENST00000520804 FMN2Q9NZ56 1722 aa29■■■□□ 2.23
PABPC1-215ENST00000520804 FOXO3O43524 673 aa28.99■■■□□ 2.23
PABPC1-215ENST00000520804 QTRT2Q9H974 415 aaKnown RBP28.99■■■□□ 2.23
PABPC1-215ENST00000520804 DHX57Q6P158 1386 aaKnown RBP28.99■■■□□ 2.23
PABPC1-215ENST00000520804 RBM6P78332 1123 aaKnown RBP28.96■■■□□ 2.23
PABPC1-215ENST00000520804 XPCQ01831 940 aaPredicted RBP28.95■■■□□ 2.22
PABPC1-215ENST00000520804 UPF1Q92900 1129 aaKnown RBP eCLIP28.95■■■□□ 2.22
PABPC1-215ENST00000520804 KIF1AQ12756 1690 aa28.93■■■□□ 2.22
PABPC1-215ENST00000520804 RGS12O14924 1447 aa28.92■■■□□ 2.22
PABPC1-215ENST00000520804 FNBP4Q8N3X1 1017 aaPredicted RBP28.91■■■□□ 2.22
PABPC1-215ENST00000520804 USP21Q9UK80 565 aa28.91■■■□□ 2.22
PABPC1-215ENST00000520804 HRCP23327 699 aa28.9■■■□□ 2.22
PABPC1-215ENST00000520804 PRAM1Q96QH2 718 aa28.89■■■□□ 2.22
PABPC1-215ENST00000520804 DLC1Q96QB1 1528 aa28.89■■■□□ 2.21
PABPC1-215ENST00000520804 ADGRB1O14514 1584 aa28.87■■■□□ 2.21
PABPC1-215ENST00000520804 RGPD8O14715 1765 aaPredicted RBP28.86■■■□□ 2.21
PABPC1-215ENST00000520804 TRPC5Q9UL62 973 aaPredicted RBP28.86■■■□□ 2.21
PABPC1-215ENST00000520804 MARF1Q9Y4F3 1742 aaKnown RBP28.86■■■□□ 2.21
PABPC1-215ENST00000520804 SAFB2Q14151 953 aaKnown RBP eCLIP28.85■■■□□ 2.21
PABPC1-215ENST00000520804 SPATA31A3Q5VYP0 1347 aa28.85■■■□□ 2.21
PABPC1-215ENST00000520804 PHF8Q9UPP1 1060 aa28.84■■■□□ 2.21
PABPC1-215ENST00000520804 KRT28Q7Z3Y7 464 aa28.83■■■□□ 2.21
PABPC1-215ENST00000520804 DCAF11Q8TEB1 546 aa28.83■■■□□ 2.21
PABPC1-215ENST00000520804 POGKQ9P215 609 aa28.83■■■□□ 2.21
PABPC1-215ENST00000520804 ATRNO75882 1429 aa28.83■■■□□ 2.21
PABPC1-215ENST00000520804 KDM2AQ9Y2K7 1162 aa28.82■■■□□ 2.2
PABPC1-215ENST00000520804 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
PABPC1-215ENST00000520804 ADGRB2O60241 1585 aa28.79■■■□□ 2.2
PABPC1-215ENST00000520804 BCL9LQ86UU0 1499 aa28.79■■■□□ 2.2
PABPC1-215ENST00000520804 TRAK1Q9UPV9 953 aa28.79■■■□□ 2.2
PABPC1-215ENST00000520804 ANKARQ7Z5J8 1434 aa28.77■■■□□ 2.2
PABPC1-215ENST00000520804 USP32Q8NFA0 1604 aa28.77■■■□□ 2.2
PABPC1-215ENST00000520804 PSME1Q06323 249 aa28.77■■■□□ 2.2
PABPC1-215ENST00000520804 TNS3Q68CZ2 1445 aa28.76■■■□□ 2.19
PABPC1-215ENST00000520804 SBNO1A3KN83 1393 aa28.74■■■□□ 2.19
PABPC1-215ENST00000520804 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.72■■■□□ 2.19
PABPC1-215ENST00000520804 HIRIP3Q9BW71 556 aaPredicted RBP28.71■■■□□ 2.19
PABPC1-215ENST00000520804 MINK1Q8N4C8 1332 aaPredicted RBP28.7■■■□□ 2.19
PABPC1-215ENST00000520804 SLIT2O94813 1529 aa28.7■■■□□ 2.19
PABPC1-215ENST00000520804 PMFBP1Q8TBY8 1022 aa28.7■■■□□ 2.18
PABPC1-215ENST00000520804 ATAD2Q6PL18 1390 aa28.7■■■□□ 2.18
PABPC1-215ENST00000520804 GJD4Q96KN9 370 aaPredicted RBP28.69■■■□□ 2.18
PABPC1-215ENST00000520804 EIF3AQ14152 1382 aaKnown RBP28.69■■■□□ 2.18
PABPC1-215ENST00000520804 ARHGEF10O15013 1369 aa28.68■■■□□ 2.18
PABPC1-215ENST00000520804 UNC5CLQ8IV45 518 aa28.68■■■□□ 2.18
PABPC1-215ENST00000520804 TULP4Q9NRJ4 1543 aa28.67■■■□□ 2.18
PABPC1-215ENST00000520804 WASLO00401 505 aaPredicted RBP28.66■■■□□ 2.18
PABPC1-215ENST00000520804 HAP1P54257 671 aaPredicted RBP28.66■■■□□ 2.18
PABPC1-215ENST00000520804 CABLES1Q8TDN4 633 aa28.66■■■□□ 2.18
PABPC1-215ENST00000520804 PRR36Q9H6K5 1346 aa28.66■■■□□ 2.18
PABPC1-215ENST00000520804 LMOD2Q6P5Q4 547 aa28.65■■■□□ 2.18
PABPC1-215ENST00000520804 ARHGEF28Q8N1W1 1705 aaKnown RBP28.64■■■□□ 2.18
PABPC1-215ENST00000520804 ABCA3Q99758 1704 aa28.64■■■□□ 2.18
PABPC1-215ENST00000520804 TRPM3Q9HCF6 1732 aaPredicted RBP28.63■■■□□ 2.17
PABPC1-215ENST00000520804 PLEKHG5O94827 1062 aa28.62■■■□□ 2.17
PABPC1-215ENST00000520804 GLI3P10071 1580 aa28.62■■■□□ 2.17
PABPC1-215ENST00000520804 RALGAPBQ86X10 1494 aa28.61■■■□□ 2.17
PABPC1-215ENST00000520804 GPRASP1Q5JY77 1395 aa28.6■■■□□ 2.17
PABPC1-215ENST00000520804 PLCH1Q4KWH8 1693 aa28.58■■■□□ 2.17
PABPC1-215ENST00000520804 NWD2Q9ULI1 1742 aa28.58■■■□□ 2.17
PABPC1-215ENST00000520804 ALS2Q96Q42 1657 aa28.58■■■□□ 2.16
PABPC1-215ENST00000520804 KIAA1210Q9ULL0 1709 aa28.57■■■□□ 2.16
PABPC1-215ENST00000520804 VPS72Q15906 364 aa28.55■■■□□ 2.16
PABPC1-215ENST00000520804 NGDNQ8NEJ9 315 aaKnown RBP28.54■■■□□ 2.16
PABPC1-215ENST00000520804 ITSN1Q15811 1721 aa28.54■■■□□ 2.16
PABPC1-215ENST00000520804 ATP7BP35670 1465 aa28.53■■■□□ 2.16
PABPC1-215ENST00000520804 FAM83GA6ND36 823 aa28.53■■■□□ 2.16
PABPC1-215ENST00000520804 NUDT16Q96DE0 195 aaKnown RBP28.52■■■□□ 2.16
PABPC1-215ENST00000520804 CCDC125Q86Z20 511 aa28.5■■■□□ 2.15
PABPC1-215ENST00000520804 CDK19Q9BWU1 502 aa28.49■■■□□ 2.15
PABPC1-215ENST00000520804 NBPF1Q3BBV0 1214 aa28.48■■■□□ 2.15
PABPC1-215ENST00000520804 EP400Q96L91 3159 aa28.48■■■□□ 2.15
PABPC1-215ENST00000520804 PAK3O75914 559 aaPredicted RBP28.47■■■□□ 2.15
PABPC1-215ENST00000520804 CCDC9Q9Y3X0 531 aaKnown RBP28.47■■■□□ 2.15
PABPC1-215ENST00000520804 BRWD3Q6RI45 1802 aa28.47■■■□□ 2.15
PABPC1-215ENST00000520804 NRAPQ86VF7 1730 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms