RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
VPS37A-206ENST00000520140 XIRP1Q702N8 1843 aaKnown RBP20.03■□□□□ 0.8
VPS37A-206ENST00000520140 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.8
VPS37A-206ENST00000520140 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
VPS37A-206ENST00000520140 SIRT1Q96EB6 747 aa20■□□□□ 0.79
VPS37A-206ENST00000520140 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
VPS37A-206ENST00000520140 TESK2Q96S53 571 aa19.97■□□□□ 0.79
VPS37A-206ENST00000520140 ADGRL3Q9HAR2 1447 aa19.95■□□□□ 0.78
VPS37A-206ENST00000520140 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
VPS37A-206ENST00000520140 POLR3GLQ9BT43 218 aa19.93■□□□□ 0.78
VPS37A-206ENST00000520140 MSH6P52701 1360 aa19.92■□□□□ 0.78
VPS37A-206ENST00000520140 DISP3Q9P2K9 1392 aa19.92■□□□□ 0.78
VPS37A-206ENST00000520140 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
VPS37A-206ENST00000520140 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
VPS37A-206ENST00000520140 CDK19Q9BWU1 502 aa19.91■□□□□ 0.78
VPS37A-206ENST00000520140 CABP2Q9NPB3 220 aa19.91■□□□□ 0.78
VPS37A-206ENST00000520140 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
VPS37A-206ENST00000520140 WASLO00401 505 aaPredicted RBP19.9■□□□□ 0.78
VPS37A-206ENST00000520140 ATF3P18847 181 aa19.9■□□□□ 0.78
VPS37A-206ENST00000520140 EVC2Q86UK5 1308 aa19.9■□□□□ 0.78
VPS37A-206ENST00000520140 TMF1P82094 1093 aa19.89■□□□□ 0.77
VPS37A-206ENST00000520140 SBNO2Q9Y2G9 1366 aa19.89■□□□□ 0.77
VPS37A-206ENST00000520140 NCOA3Q9Y6Q9 1424 aa19.89■□□□□ 0.77
VPS37A-206ENST00000520140 ADGRB2O60241 1585 aa19.89■□□□□ 0.77
VPS37A-206ENST00000520140 CERKQ8TCT0 537 aa19.88■□□□□ 0.77
VPS37A-206ENST00000520140 RGPD8O14715 1765 aaPredicted RBP19.88■□□□□ 0.77
VPS37A-206ENST00000520140 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
VPS37A-206ENST00000520140 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
VPS37A-206ENST00000520140 CADPS2Q86UW7 1296 aa19.85■□□□□ 0.77
VPS37A-206ENST00000520140 PRR36Q9H6K5 1346 aa19.84■□□□□ 0.77
VPS37A-206ENST00000520140 USP32Q8NFA0 1604 aa19.83■□□□□ 0.76
VPS37A-206ENST00000520140 NUDT16Q96DE0 195 aaKnown RBP19.82■□□□□ 0.76
VPS37A-206ENST00000520140 DCCP43146 1447 aa19.82■□□□□ 0.76
VPS37A-206ENST00000520140 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 TMC1Q8TDI8 760 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 MST1RQ04912 1400 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 UBAP1LF5GYI3 381 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 SLC24A1O60721 1099 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 ESCO1Q5FWF5 840 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 ORAI2Q96SN7 254 aa19.81■□□□□ 0.76
VPS37A-206ENST00000520140 WASHC2AQ641Q2 1341 aa19.8■□□□□ 0.76
VPS37A-206ENST00000520140 ATP7BP35670 1465 aa19.8■□□□□ 0.76
VPS37A-206ENST00000520140 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
VPS37A-206ENST00000520140 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
VPS37A-206ENST00000520140 PMFBP1Q8TBY8 1022 aa19.79■□□□□ 0.76
VPS37A-206ENST00000520140 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
VPS37A-206ENST00000520140 CDCA8Q53HL2 280 aa19.78■□□□□ 0.76
VPS37A-206ENST00000520140 CABP1Q9NZU7 370 aa19.78■□□□□ 0.76
VPS37A-206ENST00000520140 ZNF316A6NFI3 1004 aaPredicted RBP19.78■□□□□ 0.76
VPS37A-206ENST00000520140 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
VPS37A-206ENST00000520140 CCDC61Q9Y6R9 512 aa19.77■□□□□ 0.76
VPS37A-206ENST00000520140 PPIP5K1Q6PFW1 1433 aa19.77■□□□□ 0.75
VPS37A-206ENST00000520140 TOM1O60784 492 aa19.76■□□□□ 0.75
VPS37A-206ENST00000520140 CCDC7Q96M83 1385 aa19.76■□□□□ 0.75
VPS37A-206ENST00000520140 ATAD2Q6PL18 1390 aa19.76■□□□□ 0.75
VPS37A-206ENST00000520140 ITSN1Q15811 1721 aa19.75■□□□□ 0.75
VPS37A-206ENST00000520140 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
VPS37A-206ENST00000520140 ANKARQ7Z5J8 1434 aa19.75■□□□□ 0.75
VPS37A-206ENST00000520140 IQSEC2Q5JU85 1478 aa19.74■□□□□ 0.75
VPS37A-206ENST00000520140 TOPAZ1Q8N9V7 1692 aa19.74■□□□□ 0.75
VPS37A-206ENST00000520140 MYOM1P52179 1685 aa19.73■□□□□ 0.75
VPS37A-206ENST00000520140 BRINP3Q76B58 766 aa19.73■□□□□ 0.75
VPS37A-206ENST00000520140 PHF8Q9UPP1 1060 aa19.73■□□□□ 0.75
VPS37A-206ENST00000520140 FOXO3O43524 673 aa19.72■□□□□ 0.75
VPS37A-206ENST00000520140 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
VPS37A-206ENST00000520140 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
VPS37A-206ENST00000520140 NGDNQ8NEJ9 315 aaKnown RBP19.71■□□□□ 0.75
VPS37A-206ENST00000520140 ACEP12821 1306 aa19.71■□□□□ 0.75
VPS37A-206ENST00000520140 PUS7Q96PZ0 661 aaKnown RBP19.7■□□□□ 0.74
VPS37A-206ENST00000520140 DDX10Q13206 875 aaKnown RBP19.67■□□□□ 0.74
VPS37A-206ENST00000520140 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
VPS37A-206ENST00000520140 PSME1Q06323 249 aa19.66■□□□□ 0.74
VPS37A-206ENST00000520140 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
VPS37A-206ENST00000520140 KIF1AQ12756 1690 aa19.66■□□□□ 0.74
VPS37A-206ENST00000520140 CD163L1Q9NR16 1453 aa19.66■□□□□ 0.74
VPS37A-206ENST00000520140 PANK3Q9H999 370 aa19.66■□□□□ 0.74
VPS37A-206ENST00000520140 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.74
VPS37A-206ENST00000520140 HDGFL2Q7Z4V5 671 aaPredicted RBP19.64■□□□□ 0.73
VPS37A-206ENST00000520140 AKAP12Q02952 1782 aa19.64■□□□□ 0.73
VPS37A-206ENST00000520140 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
VPS37A-206ENST00000520140 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
VPS37A-206ENST00000520140 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
VPS37A-206ENST00000520140 PAK3O75914 559 aaPredicted RBP19.63■□□□□ 0.73
VPS37A-206ENST00000520140 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
VPS37A-206ENST00000520140 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
VPS37A-206ENST00000520140 CPSF1Q10570 1443 aaKnown RBP19.62■□□□□ 0.73
VPS37A-206ENST00000520140 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
VPS37A-206ENST00000520140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.734e-7■■■□□ 14.7
VPS37A-206ENST00000520140 CARD14Q9BXL6 1004 aa19.61■□□□□ 0.73
VPS37A-206ENST00000520140 NPHP3Q7Z494 1330 aa19.61■□□□□ 0.73
VPS37A-206ENST00000520140 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
VPS37A-206ENST00000520140 NHSL1Q5SYE7 1610 aa19.6■□□□□ 0.73
VPS37A-206ENST00000520140 LMOD2Q6P5Q4 547 aa19.6■□□□□ 0.73
VPS37A-206ENST00000520140 USP6P35125 1406 aa19.59■□□□□ 0.73
VPS37A-206ENST00000520140 MON2Q7Z3U7 1717 aa19.59■□□□□ 0.73
VPS37A-206ENST00000520140 ZNF692Q9BU19 519 aaPredicted RBP19.59■□□□□ 0.73
VPS37A-206ENST00000520140 PHLPP1O60346 1717 aa19.58■□□□□ 0.72
VPS37A-206ENST00000520140 NSD3Q9BZ95 1437 aa19.58■□□□□ 0.72
VPS37A-206ENST00000520140 NUTM2GQ5VZR2 741 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms