RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 HSPA1LP34931 641 aa16.62■□□□□ 0.25
SPIDR-212ENST00000519661 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 RALGAPBQ86X10 1494 aa16.61■□□□□ 0.25
SPIDR-212ENST00000519661 STK26Q9P289 416 aa16.6■□□□□ 0.25
SPIDR-212ENST00000519661 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
SPIDR-212ENST00000519661 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
SPIDR-212ENST00000519661 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
SPIDR-212ENST00000519661 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
SPIDR-212ENST00000519661 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
SPIDR-212ENST00000519661 PRAM1Q96QH2 718 aa16.59■□□□□ 0.25
SPIDR-212ENST00000519661 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-212ENST00000519661 NBPF8Q3BBV2 869 aa16.58■□□□□ 0.24
SPIDR-212ENST00000519661 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
SPIDR-212ENST00000519661 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
SPIDR-212ENST00000519661 TRAK1Q9UPV9 953 aa16.56■□□□□ 0.24
SPIDR-212ENST00000519661 TULP4Q9NRJ4 1543 aa16.54■□□□□ 0.24
SPIDR-212ENST00000519661 SOS2Q07890 1332 aaPredicted RBP16.53■□□□□ 0.24
SPIDR-212ENST00000519661 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
SPIDR-212ENST00000519661 ROCK2O75116 1388 aaKnown RBP16.52■□□□□ 0.24
SPIDR-212ENST00000519661 USP32Q8NFA0 1604 aa16.52■□□□□ 0.24
SPIDR-212ENST00000519661 POGKQ9P215 609 aa16.52■□□□□ 0.24
SPIDR-212ENST00000519661 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
SPIDR-212ENST00000519661 JCADQ9P266 1359 aa16.51■□□□□ 0.23
SPIDR-212ENST00000519661 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-212ENST00000519661 PHLPP1O60346 1717 aa16.5■□□□□ 0.23
SPIDR-212ENST00000519661 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-212ENST00000519661 ATP7BP35670 1465 aa16.5■□□□□ 0.23
SPIDR-212ENST00000519661 PXDNQ92626 1479 aa16.5■□□□□ 0.23
SPIDR-212ENST00000519661 ORAI2Q96SN7 254 aa16.49■□□□□ 0.23
SPIDR-212ENST00000519661 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
SPIDR-212ENST00000519661 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
SPIDR-212ENST00000519661 PRR36Q9H6K5 1346 aa16.47■□□□□ 0.23
SPIDR-212ENST00000519661 SPATA31A6Q5VVP1 1343 aa16.46■□□□□ 0.23
SPIDR-212ENST00000519661 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
SPIDR-212ENST00000519661 MED1Q15648 1581 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-212ENST00000519661 TOPAZ1Q8N9V7 1692 aa16.45■□□□□ 0.22
SPIDR-212ENST00000519661 MINK1Q8N4C8 1332 aaPredicted RBP16.45■□□□□ 0.22
SPIDR-212ENST00000519661 QRICH2Q9H0J4 1663 aa16.44■□□□□ 0.22
SPIDR-212ENST00000519661 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■□ 22
SPIDR-212ENST00000519661 COL22A1Q8NFW1 1626 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-212ENST00000519661 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
SPIDR-212ENST00000519661 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
SPIDR-212ENST00000519661 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
SPIDR-212ENST00000519661 CCER1Q8TC90 406 aaPredicted RBP16.43■□□□□ 0.22
SPIDR-212ENST00000519661 PUS7Q96PZ0 661 aaKnown RBP16.43■□□□□ 0.22
SPIDR-212ENST00000519661 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
SPIDR-212ENST00000519661 SBNO1A3KN83 1393 aa16.42■□□□□ 0.22
SPIDR-212ENST00000519661 PLEKHG3A1L390 1219 aa16.42■□□□□ 0.22
SPIDR-212ENST00000519661 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
SPIDR-212ENST00000519661 ITSN1Q15811 1721 aa16.42■□□□□ 0.22
SPIDR-212ENST00000519661 SLC24A1O60721 1099 aa16.41■□□□□ 0.22
SPIDR-212ENST00000519661 HIRIP3Q9BW71 556 aaPredicted RBP16.41■□□□□ 0.22
SPIDR-212ENST00000519661 CDK19Q9BWU1 502 aa16.41■□□□□ 0.22
SPIDR-212ENST00000519661 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
SPIDR-212ENST00000519661 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
SPIDR-212ENST00000519661 FOXO3O43524 673 aa16.39■□□□□ 0.21
SPIDR-212ENST00000519661 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
SPIDR-212ENST00000519661 TESK2Q96S53 571 aa16.39■□□□□ 0.21
SPIDR-212ENST00000519661 RGPD8O14715 1765 aaPredicted RBP16.38■□□□□ 0.21
SPIDR-212ENST00000519661 LRP6O75581 1613 aa16.38■□□□□ 0.21
SPIDR-212ENST00000519661 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
SPIDR-212ENST00000519661 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
SPIDR-212ENST00000519661 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
SPIDR-212ENST00000519661 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
SPIDR-212ENST00000519661 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
SPIDR-212ENST00000519661 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
SPIDR-212ENST00000519661 NUTM2FA1L443 756 aa16.35■□□□□ 0.21
SPIDR-212ENST00000519661 USP47Q96K76 1375 aa16.35■□□□□ 0.21
SPIDR-212ENST00000519661 PSME1Q06323 249 aa16.34■□□□□ 0.21
SPIDR-212ENST00000519661 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
SPIDR-212ENST00000519661 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
SPIDR-212ENST00000519661 SSH2Q76I76 1423 aa16.34■□□□□ 0.21
SPIDR-212ENST00000519661 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
SPIDR-212ENST00000519661 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
SPIDR-212ENST00000519661 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
SPIDR-212ENST00000519661 NINLQ9Y2I6 1382 aa16.31■□□□□ 0.2
SPIDR-212ENST00000519661 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
SPIDR-212ENST00000519661 ACEP12821 1306 aa16.3■□□□□ 0.2
SPIDR-212ENST00000519661 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
SPIDR-212ENST00000519661 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
SPIDR-212ENST00000519661 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
SPIDR-212ENST00000519661 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
SPIDR-212ENST00000519661 USP6P35125 1406 aa16.28■□□□□ 0.2
SPIDR-212ENST00000519661 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
SPIDR-212ENST00000519661 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
SPIDR-212ENST00000519661 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.2
SPIDR-212ENST00000519661 CRYBG1Q9Y4K1 1723 aa16.27■□□□□ 0.19
SPIDR-212ENST00000519661 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-212ENST00000519661 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
SPIDR-212ENST00000519661 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
SPIDR-212ENST00000519661 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
SPIDR-212ENST00000519661 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
SPIDR-212ENST00000519661 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
SPIDR-212ENST00000519661 USP19O94966 1318 aa16.24■□□□□ 0.19
SPIDR-212ENST00000519661 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
SPIDR-212ENST00000519661 SLIT2O94813 1529 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 304.8 ms