RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 OATP04181 439 aa7.07□□□□□ -1.28
PABPC1-212ENST00000519622 CFHP08603 1231 aa7.07□□□□□ -1.28
PABPC1-212ENST00000519622 NESP48681 1621 aa7.06□□□□□ -1.28
PABPC1-212ENST00000519622 GFRA3O60609 400 aa7.05□□□□□ -1.28
PABPC1-212ENST00000519622 Q6ZNB5 142 aa7.05□□□□□ -1.28
PABPC1-212ENST00000519622 EMID1Q96A84 441 aaPredicted RBP7.05□□□□□ -1.28
PABPC1-212ENST00000519622 PRR14Q9BWN1 585 aa7.05□□□□□ -1.28
PABPC1-212ENST00000519622 FANCD2Q9BXW9 1451 aa7.04□□□□□ -1.28
PABPC1-212ENST00000519622 ARHGAP35Q9NRY4 1499 aa7.04□□□□□ -1.28
PABPC1-212ENST00000519622 KIF27Q86VH2 1401 aa7.04□□□□□ -1.28
PABPC1-212ENST00000519622 PDE4DQ08499 809 aa7.04□□□□□ -1.28
PABPC1-212ENST00000519622 TOPBP1Q92547 1522 aa7.04□□□□□ -1.28
PABPC1-212ENST00000519622 LAMC3Q9Y6N6 1575 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 URB2Q14146 1524 aaKnown RBP7.03□□□□□ -1.28
PABPC1-212ENST00000519622 ABCA10Q8WWZ4 1543 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 RNF223E7ERA6 249 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 PPEF1O14829 653 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-212ENST00000519622 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-212ENST00000519622 AMHR2Q16671 573 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 V9GY48 417 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-212ENST00000519622 CUX2O14529 1486 aa7.03□□□□□ -1.28
PABPC1-212ENST00000519622 POLA1P09884 1462 aaPredicted RBP7.03□□□□□ -1.28
PABPC1-212ENST00000519622 ABCA5Q8WWZ7 1642 aa7.02□□□□□ -1.29
PABPC1-212ENST00000519622 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-212ENST00000519622 TTLL12Q14166 644 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-212ENST00000519622 NEUROD2Q15784 382 aa7.02□□□□□ -1.29
PABPC1-212ENST00000519622 PUS10Q3MIT2 529 aaKnown RBP7.02□□□□□ -1.29
PABPC1-212ENST00000519622 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
PABPC1-212ENST00000519622 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
PABPC1-212ENST00000519622 GPBP1L1Q9HC44 474 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-212ENST00000519622 IGF1RP08069 1367 aa7.02□□□□□ -1.29
PABPC1-212ENST00000519622 S1PR4O95977 384 aa7.01□□□□□ -1.29
PABPC1-212ENST00000519622 SCUBE3Q8IX30 993 aa7.01□□□□□ -1.29
PABPC1-212ENST00000519622 PARP9Q8IXQ6 854 aa7.01□□□□□ -1.29
PABPC1-212ENST00000519622 KIF21AQ7Z4S6 1674 aa7□□□□□ -1.29
PABPC1-212ENST00000519622 GGCXP38435 758 aa7□□□□□ -1.29
PABPC1-212ENST00000519622 DAXXQ9UER7 740 aaPredicted RBP7□□□□□ -1.29
PABPC1-212ENST00000519622 RAD54L2Q9Y4B4 1467 aa6.99□□□□□ -1.29
PABPC1-212ENST00000519622 DDX11L8A8MPP1 907 aa6.99□□□□□ -1.29
PABPC1-212ENST00000519622 UBTFP17480 764 aaKnown RBP6.99□□□□□ -1.29
PABPC1-212ENST00000519622 GIGYF2Q6Y7W6 1299 aaKnown RBP6.99□□□□□ -1.29
PABPC1-212ENST00000519622 GPCPD1Q9NPB8 672 aa6.99□□□□□ -1.29
PABPC1-212ENST00000519622 CFAP43Q8NDM7 1665 aa6.99□□□□□ -1.29
PABPC1-212ENST00000519622 TARBP1Q13395 1621 aaKnown RBP6.98□□□□□ -1.29
PABPC1-212ENST00000519622 CUL7Q14999 1698 aa6.98□□□□□ -1.29
PABPC1-212ENST00000519622 CLCN1P35523 988 aa6.98□□□□□ -1.29
PABPC1-212ENST00000519622 LAPTM4AQ15012 233 aa6.98□□□□□ -1.29
PABPC1-212ENST00000519622 TRIM67Q6ZTA4 783 aa6.98□□□□□ -1.29
PABPC1-212ENST00000519622 NRG2O14511 850 aaPredicted RBP6.97□□□□□ -1.29
PABPC1-212ENST00000519622 NR1I2O75469 434 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 ADH1BP00325 375 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 SLC19A1P41440 591 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 PLA2G2CQ5R387 149 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 TRAF7Q6Q0C0 670 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 LIAT1Q6ZQX7 453 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 RDH13Q8NBN7 331 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 KDM4CQ9H3R0 1056 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 PDZRN3Q9UPQ7 1066 aa6.97□□□□□ -1.29
PABPC1-212ENST00000519622 CTTNBP2Q8WZ74 1663 aa6.96□□□□□ -1.29
PABPC1-212ENST00000519622 MAP3K1Q13233 1512 aa6.96□□□□□ -1.29
PABPC1-212ENST00000519622 PCF11O94913 1555 aaKnown RBP6.96□□□□□ -1.29
PABPC1-212ENST00000519622 MS4A1P11836 297 aa6.96□□□□□ -1.3
PABPC1-212ENST00000519622 ZEB1P37275 1124 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-212ENST00000519622 FUT2Q10981 343 aa6.96□□□□□ -1.3
PABPC1-212ENST00000519622 MORN1Q5T089 497 aa6.96□□□□□ -1.3
PABPC1-212ENST00000519622 ANKLE1Q8NAG6 615 aa6.96□□□□□ -1.3
PABPC1-212ENST00000519622 TIAM1Q13009 1591 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 RRBP1Q9P2E9 1410 aaKnown RBP6.95□□□□□ -1.3
PABPC1-212ENST00000519622 GCGRP47871 477 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 RSPH4AQ5TD94 716 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 SPRYD7Q5W111 196 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 SPSB2Q99619 263 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 SLC6A16Q9GZN6 736 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 FAM217BQ9NTX9 383 aaPredicted RBP6.95□□□□□ -1.3
PABPC1-212ENST00000519622 LRRIQ1Q96JM4 1722 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 SAMD9Q5K651 1589 aa6.95□□□□□ -1.3
PABPC1-212ENST00000519622 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
PABPC1-212ENST00000519622 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
PABPC1-212ENST00000519622 CARMIL1Q5VZK9 1371 aa6.94□□□□□ -1.3
PABPC1-212ENST00000519622 SSTR3P32745 418 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-212ENST00000519622 FAM160A2Q8N612 972 aaPredicted RBP6.93□□□□□ -1.3
PABPC1-212ENST00000519622 ATP6V1AP38606 617 aa6.92□□□□□ -1.3
PABPC1-212ENST00000519622 KANK4Q5T7N3 995 aaPredicted RBP6.92□□□□□ -1.3
PABPC1-212ENST00000519622 ZNF598Q86UK7 904 aaKnown RBP6.92□□□□□ -1.3
PABPC1-212ENST00000519622 SNAPC4Q5SXM2 1469 aa6.92□□□□□ -1.3
PABPC1-212ENST00000519622 EFCAB5A4FU69 1503 aa6.91□□□□□ -1.3
PABPC1-212ENST00000519622 PBRM1Q86U86 1689 aa6.91□□□□□ -1.3
PABPC1-212ENST00000519622 CD46P15529 392 aa6.91□□□□□ -1.3
PABPC1-212ENST00000519622 SULF1Q8IWU6 871 aa6.91□□□□□ -1.3
PABPC1-212ENST00000519622 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
PABPC1-212ENST00000519622 BRICD5Q6PL45 260 aa6.9□□□□□ -1.3
PABPC1-212ENST00000519622 BEGAINQ9BUH8 593 aa6.9□□□□□ -1.3
PABPC1-212ENST00000519622 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
PABPC1-212ENST00000519622 TTBK1Q5TCY1 1321 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-212ENST00000519622 AQRO60306 1485 aaKnown RBP eCLIP6.9□□□□□ -1.312e-16■■■□□ 15.4
PABPC1-212ENST00000519622 ADAMTS12P58397 1594 aa6.9□□□□□ -1.31
PABPC1-212ENST00000519622 GDF9O60383 454 aa6.89□□□□□ -1.31
PABPC1-212ENST00000519622 ZNF697Q5TEC3 545 aa6.89□□□□□ -1.31
PABPC1-212ENST00000519622 RNF19BQ6ZMZ0 732 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms