RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 SUZ12Q15022 739 aaKnown RBP5.96□□□□□ -1.46
PABPC1-211ENST00000519596 MORN1Q5T089 497 aa5.96□□□□□ -1.46
PABPC1-211ENST00000519596 ZSCAN1Q8NBB4 408 aa5.96□□□□□ -1.46
PABPC1-211ENST00000519596 TESPA1A2RU30 521 aaPredicted RBP5.95□□□□□ -1.46
PABPC1-211ENST00000519596 KIFC2Q96AC6 838 aa5.95□□□□□ -1.46
PABPC1-211ENST00000519596 MRGPRX2Q96LB1 330 aa5.95□□□□□ -1.46
PABPC1-211ENST00000519596 TULP1O00294 542 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-211ENST00000519596 ZBTB24O43167 697 aaPredicted RBP5.94□□□□□ -1.46
PABPC1-211ENST00000519596 PXYLP1Q8TE99 480 aa5.94□□□□□ -1.46
PABPC1-211ENST00000519596 GNPATO15228 680 aa5.93□□□□□ -1.46
PABPC1-211ENST00000519596 FMNL1O95466 1100 aaPredicted RBP5.93□□□□□ -1.46
PABPC1-211ENST00000519596 FUT2Q10981 343 aa5.93□□□□□ -1.46
PABPC1-211ENST00000519596 RBM26Q5T8P6 1007 aaKnown RBP5.93□□□□□ -1.46
PABPC1-211ENST00000519596 SLC16A10Q8TF71 515 aa5.93□□□□□ -1.46
PABPC1-211ENST00000519596 NXF1Q9UBU9 619 aaKnown RBP5.93□□□□□ -1.46
PABPC1-211ENST00000519596 SLC27A5Q9Y2P5 690 aa5.93□□□□□ -1.46
PABPC1-211ENST00000519596 VEGFBP49765 207 aa5.92□□□□□ -1.46
PABPC1-211ENST00000519596 TRIM32Q13049 653 aa5.92□□□□□ -1.46
PABPC1-211ENST00000519596 BRICD5Q6PL45 260 aa5.91□□□□□ -1.46
PABPC1-211ENST00000519596 METTL3Q86U44 580 aaKnown RBP5.91□□□□□ -1.46
PABPC1-211ENST00000519596 ATP6V1AP38606 617 aa5.9□□□□□ -1.46
PABPC1-211ENST00000519596 RDH13Q8NBN7 331 aa5.9□□□□□ -1.46
PABPC1-211ENST00000519596 IRF7Q92985 503 aa5.9□□□□□ -1.46
PABPC1-211ENST00000519596 ERBB4Q15303 1308 aa5.9□□□□□ -1.47
PABPC1-211ENST00000519596 FECHP22830 423 aa5.89□□□□□ -1.47
PABPC1-211ENST00000519596 MSS51Q4VC12 460 aa5.89□□□□□ -1.47
PABPC1-211ENST00000519596 RNF19BQ6ZMZ0 732 aa5.89□□□□□ -1.47
PABPC1-211ENST00000519596 GPIHBP1Q8IV16 184 aa5.89□□□□□ -1.47
PABPC1-211ENST00000519596 SULF1Q8IWU6 871 aa5.89□□□□□ -1.47
PABPC1-211ENST00000519596 DAXXQ9UER7 740 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-211ENST00000519596 SALL2Q9Y467 1007 aaPredicted RBP5.89□□□□□ -1.47
PABPC1-211ENST00000519596 H3BM21 787 aa5.88□□□□□ -1.47
PABPC1-211ENST00000519596 DDX11L8A8MPP1 907 aa5.87□□□□□ -1.47
PABPC1-211ENST00000519596 BMP1P13497 986 aa5.87□□□□□ -1.47
PABPC1-211ENST00000519596 TRIM46Q7Z4K8 759 aa5.87□□□□□ -1.47
PABPC1-211ENST00000519596 NPAS3Q8IXF0 933 aa5.87□□□□□ -1.47
PABPC1-211ENST00000519596 GCGRP47871 477 aa5.86□□□□□ -1.47
PABPC1-211ENST00000519596 SKOR1P84550 965 aa5.86□□□□□ -1.47
PABPC1-211ENST00000519596 RC3H1Q5TC82 1133 aaKnown RBP5.86□□□□□ -1.47
PABPC1-211ENST00000519596 VSIG10Q8N0Z9 540 aa5.86□□□□□ -1.47
PABPC1-211ENST00000519596 REPIN1Q9BWE0 567 aaKnown RBP5.86□□□□□ -1.47
PABPC1-211ENST00000519596 KDM2AQ9Y2K7 1162 aa5.86□□□□□ -1.47
PABPC1-211ENST00000519596 MMP16P51512 607 aa5.85□□□□□ -1.47
PABPC1-211ENST00000519596 GRIPAP1Q4V328 841 aa5.85□□□□□ -1.47
PABPC1-211ENST00000519596 NLRP7Q8WX94 980 aa5.85□□□□□ -1.47
PABPC1-211ENST00000519596 ALDH1A1P00352 501 aa5.84□□□□□ -1.47
PABPC1-211ENST00000519596 GSK3AP49840 483 aa5.84□□□□□ -1.47
PABPC1-211ENST00000519596 KCTD17Q8N5Z5 321 aa5.84□□□□□ -1.47
PABPC1-211ENST00000519596 GPR37O15354 613 aa5.82□□□□□ -1.48
PABPC1-211ENST00000519596 CAPN5O15484 640 aaPredicted RBP5.81□□□□□ -1.48
PABPC1-211ENST00000519596 DXOO77932 396 aaKnown RBP5.81□□□□□ -1.48
PABPC1-211ENST00000519596 WNT7BP56706 349 aa5.8□□□□□ -1.48
PABPC1-211ENST00000519596 KCNMA1Q12791 1236 aa5.8□□□□□ -1.48
PABPC1-211ENST00000519596 MAP2K5Q13163 448 aa5.8□□□□□ -1.48
PABPC1-211ENST00000519596 CCDC24Q8N4L8 307 aa5.8□□□□□ -1.48
PABPC1-211ENST00000519596 KRI1Q8N9T8 703 aaKnown RBP5.8□□□□□ -1.48
PABPC1-211ENST00000519596 ZFP42Q96MM3 310 aa5.8□□□□□ -1.48
PABPC1-211ENST00000519596 SIAH2O43255 324 aa5.79□□□□□ -1.48
PABPC1-211ENST00000519596 Q3C1V9 767 aa5.79□□□□□ -1.48
PABPC1-211ENST00000519596 PHOX2BQ99453 314 aa5.79□□□□□ -1.48
PABPC1-211ENST00000519596 MINK1Q8N4C8 1332 aaPredicted RBP5.78□□□□□ -1.48
PABPC1-211ENST00000519596 USB1Q9BQ65 265 aaKnown RBP5.78□□□□□ -1.48
PABPC1-211ENST00000519596 IRF6O14896 467 aa5.77□□□□□ -1.49
PABPC1-211ENST00000519596 VSIG8P0DPA2 414 aa5.77□□□□□ -1.49
PABPC1-211ENST00000519596 SOBPA7XYQ1 873 aa5.76□□□□□ -1.49
PABPC1-211ENST00000519596 WASF2Q9Y6W5 498 aa5.76□□□□□ -1.49
PABPC1-211ENST00000519596 KDM4AO75164 1064 aa5.75□□□□□ -1.49
PABPC1-211ENST00000519596 CD46P15529 392 aa5.75□□□□□ -1.49
PABPC1-211ENST00000519596 USP46P62068 366 aa5.75□□□□□ -1.49
PABPC1-211ENST00000519596 MDM2Q00987 491 aaPredicted RBP5.75□□□□□ -1.49
PABPC1-211ENST00000519596 EHBP1Q8NDI1 1231 aa5.75□□□□□ -1.49
PABPC1-211ENST00000519596 HLA-CQ95604 372 aa5.75□□□□□ -1.49
PABPC1-211ENST00000519596 CLCN1P35523 988 aa5.74□□□□□ -1.49
PABPC1-211ENST00000519596 PTCRAQ6ISU1 281 aaPredicted RBP5.74□□□□□ -1.49
PABPC1-211ENST00000519596 TMEM151AQ8N4L1 468 aa5.74□□□□□ -1.49
PABPC1-211ENST00000519596 GDF11O95390 407 aa5.73□□□□□ -1.49
PABPC1-211ENST00000519596 RASSF7Q02833 373 aa5.73□□□□□ -1.49
PABPC1-211ENST00000519596 NUTM1Q86Y26 1132 aa5.73□□□□□ -1.49
PABPC1-211ENST00000519596 CCDC102AQ96A19 550 aa5.73□□□□□ -1.49
PABPC1-211ENST00000519596 GPCPD1Q9NPB8 672 aa5.73□□□□□ -1.49
PABPC1-211ENST00000519596 MRPL14Q6P1L8 145 aaKnown RBP5.72□□□□□ -1.49
PABPC1-211ENST00000519596 PURBQ96QR8 312 aaKnown RBP5.72□□□□□ -1.49
PABPC1-211ENST00000519596 TLL2Q9Y6L7 1015 aa5.71□□□□□ -1.5
PABPC1-211ENST00000519596 JUNDP17535 347 aa5.7□□□□□ -1.5
PABPC1-211ENST00000519596 SH3BP2P78314 561 aa5.7□□□□□ -1.5
PABPC1-211ENST00000519596 GUCA2AQ02747 115 aa5.69□□□□□ -1.5
PABPC1-211ENST00000519596 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.69□□□□□ -1.5
PABPC1-211ENST00000519596 SYMPKQ92797 1274 aaKnown RBP5.69□□□□□ -1.5
PABPC1-211ENST00000519596 FAM217BQ9NTX9 383 aaPredicted RBP5.69□□□□□ -1.5
PABPC1-211ENST00000519596 HOXA2O43364 376 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 TIMP2P16035 220 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 KRT76Q01546 638 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 NNTQ13423 1086 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 SCARF1Q14162 830 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 NUDT12Q9BQG2 462 aa5.68□□□□□ -1.5
PABPC1-211ENST00000519596 PPFIA3O75145 1194 aa5.67□□□□□ -1.5
PABPC1-211ENST00000519596 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-211ENST00000519596 ADAMTS8Q9UP79 889 aa5.67□□□□□ -1.5
PABPC1-211ENST00000519596 SLC24A1O60721 1099 aa5.66□□□□□ -1.5
PABPC1-211ENST00000519596 SSTR3P32745 418 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms