RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 TECPR2O15040 1411 aa11.09□□□□□ -0.63
CLK4-203ENST00000519583 RALGAPBQ86X10 1494 aa11.08□□□□□ -0.63
CLK4-203ENST00000519583 ATF3P18847 181 aa11.08□□□□□ -0.64
CLK4-203ENST00000519583 USP47Q96K76 1375 aa11.08□□□□□ -0.64
CLK4-203ENST00000519583 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLK4-203ENST00000519583 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 POGKQ9P215 609 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 ADGRL3Q9HAR2 1447 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 PRAM1Q96QH2 718 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 CCDC7Q96M83 1385 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 ANP32CO43423 234 aa11.07□□□□□ -0.64
CLK4-203ENST00000519583 KNDC1Q76NI1 1749 aa11.06□□□□□ -0.64
CLK4-203ENST00000519583 KIAA1210Q9ULL0 1709 aa11.06□□□□□ -0.64
CLK4-203ENST00000519583 SIRT1Q96EB6 747 aa11.06□□□□□ -0.64
CLK4-203ENST00000519583 CARD11Q9BXL7 1154 aa11.06□□□□□ -0.64
CLK4-203ENST00000519583 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.06□□□□□ -0.64
CLK4-203ENST00000519583 ROCK2O75116 1388 aaKnown RBP11.05□□□□□ -0.64
CLK4-203ENST00000519583 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
CLK4-203ENST00000519583 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
CLK4-203ENST00000519583 NALCNQ8IZF0 1738 aa11.05□□□□□ -0.64
CLK4-203ENST00000519583 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
CLK4-203ENST00000519583 DLC1Q96QB1 1528 aa11.04□□□□□ -0.64
CLK4-203ENST00000519583 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
CLK4-203ENST00000519583 DCCP43146 1447 aa11.03□□□□□ -0.64
CLK4-203ENST00000519583 MINK1Q8N4C8 1332 aaPredicted RBP11.02□□□□□ -0.64
CLK4-203ENST00000519583 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
CLK4-203ENST00000519583 MST1RQ04912 1400 aa11.01□□□□□ -0.65
CLK4-203ENST00000519583 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
CLK4-203ENST00000519583 CCER2I3L3R5 266 aa11□□□□□ -0.65
CLK4-203ENST00000519583 ST20-MTHFSA0A0A6YYL1 179 aa11□□□□□ -0.65
CLK4-203ENST00000519583 HSPA1LP34931 641 aa11□□□□□ -0.65
CLK4-203ENST00000519583 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
CLK4-203ENST00000519583 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
CLK4-203ENST00000519583 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
CLK4-203ENST00000519583 CENPJQ9HC77 1338 aaPredicted RBP10.99□□□□□ -0.65
CLK4-203ENST00000519583 ROBO1Q9Y6N7 1651 aa10.99□□□□□ -0.65
CLK4-203ENST00000519583 C1orf167Q5SNV9 1468 aa10.99□□□□□ -0.65
CLK4-203ENST00000519583 BRINP3Q76B58 766 aa10.99□□□□□ -0.65
CLK4-203ENST00000519583 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
CLK4-203ENST00000519583 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
CLK4-203ENST00000519583 ORAI2Q96SN7 254 aa10.97□□□□□ -0.65
CLK4-203ENST00000519583 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
CLK4-203ENST00000519583 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
CLK4-203ENST00000519583 ADGRB2O60241 1585 aa10.95□□□□□ -0.66
CLK4-203ENST00000519583 FMN2Q9NZ56 1722 aa10.95□□□□□ -0.66
CLK4-203ENST00000519583 CDK19Q9BWU1 502 aa10.95□□□□□ -0.66
CLK4-203ENST00000519583 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
CLK4-203ENST00000519583 QRICH2Q9H0J4 1663 aa10.94□□□□□ -0.66
CLK4-203ENST00000519583 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
CLK4-203ENST00000519583 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
CLK4-203ENST00000519583 PRKRIP1Q9H875 184 aaPredicted RBP10.93□□□□□ -0.66
CLK4-203ENST00000519583 FOXO3O43524 673 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
CLK4-203ENST00000519583 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 TULP4Q9NRJ4 1543 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 PHLPP1O60346 1717 aa10.92□□□□□ -0.66
CLK4-203ENST00000519583 EVC2Q86UK5 1308 aa10.91□□□□□ -0.66
CLK4-203ENST00000519583 XPCQ01831 940 aaPredicted RBP10.91□□□□□ -0.66
CLK4-203ENST00000519583 RGPD8O14715 1765 aaPredicted RBP10.91□□□□□ -0.66
CLK4-203ENST00000519583 AHDC1Q5TGY3 1603 aaPredicted RBP10.91□□□□□ -0.66
CLK4-203ENST00000519583 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
CLK4-203ENST00000519583 USP32Q8NFA0 1604 aa10.9□□□□□ -0.66
CLK4-203ENST00000519583 TESK2Q96S53 571 aa10.9□□□□□ -0.66
CLK4-203ENST00000519583 ATP7BP35670 1465 aa10.89□□□□□ -0.67
CLK4-203ENST00000519583 NHSL1Q5SYE7 1610 aa10.89□□□□□ -0.67
CLK4-203ENST00000519583 COL16A1Q07092 1604 aaPredicted RBP10.89□□□□□ -0.67
CLK4-203ENST00000519583 CNGB1Q14028 1251 aaPredicted RBP10.89□□□□□ -0.67
CLK4-203ENST00000519583 CCDC184Q52MB2 194 aa10.89□□□□□ -0.67
CLK4-203ENST00000519583 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
CLK4-203ENST00000519583 SBNO2Q9Y2G9 1366 aa10.89□□□□□ -0.67
CLK4-203ENST00000519583 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
CLK4-203ENST00000519583 DISP3Q9P2K9 1392 aa10.88□□□□□ -0.67
CLK4-203ENST00000519583 LRRC59Q96AG4 307 aaKnown RBP10.88□□□□□ -0.67
CLK4-203ENST00000519583 SOS2Q07890 1332 aaPredicted RBP10.88□□□□□ -0.67
CLK4-203ENST00000519583 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
CLK4-203ENST00000519583 PSME1Q06323 249 aa10.88□□□□□ -0.67
CLK4-203ENST00000519583 JCADQ9P266 1359 aa10.88□□□□□ -0.67
CLK4-203ENST00000519583 KRT28Q7Z3Y7 464 aa10.88□□□□□ -0.67
CLK4-203ENST00000519583 TMF1P82094 1093 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 PPIP5K1Q6PFW1 1433 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 MRS2Q9HD23 443 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 CABP1Q9NZU7 370 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 PXDNQ92626 1479 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 ITSN1Q15811 1721 aa10.86□□□□□ -0.67
CLK4-203ENST00000519583 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
CLK4-203ENST00000519583 ACEP12821 1306 aa10.85□□□□□ -0.67
CLK4-203ENST00000519583 ATAD2Q6PL18 1390 aa10.85□□□□□ -0.67
CLK4-203ENST00000519583 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
CLK4-203ENST00000519583 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
CLK4-203ENST00000519583 TMC1Q8TDI8 760 aa10.84□□□□□ -0.67
CLK4-203ENST00000519583 TOPAZ1Q8N9V7 1692 aa10.84□□□□□ -0.67
CLK4-203ENST00000519583 NUTM2BA6NNL0 878 aaPredicted RBP10.83□□□□□ -0.67
CLK4-203ENST00000519583 NUTM2EB1AL46 878 aaPredicted RBP10.83□□□□□ -0.67
CLK4-203ENST00000519583 PAK3O75914 559 aaPredicted RBP10.83□□□□□ -0.67
CLK4-203ENST00000519583 NUTM2AQ8IVF1 878 aaPredicted RBP10.83□□□□□ -0.67
CLK4-203ENST00000519583 PNPLA6Q8IY17 1366 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms