RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 CENPJQ9HC77 1338 aaPredicted RBP29.69■■■□□ 2.34
TOP1MT-206ENST00000518951 USP47Q96K76 1375 aa29.69■■■□□ 2.34
TOP1MT-206ENST00000518951 EIF3AQ14152 1382 aaKnown RBP29.67■■■□□ 2.34
TOP1MT-206ENST00000518951 MINK1Q8N4C8 1332 aaPredicted RBP29.67■■■□□ 2.34
TOP1MT-206ENST00000518951 C19orf44Q9H6X5 657 aa29.67■■■□□ 2.34
TOP1MT-206ENST00000518951 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
TOP1MT-206ENST00000518951 HIRIP3Q9BW71 556 aaPredicted RBP29.66■■■□□ 2.34
TOP1MT-206ENST00000518951 ST20-MTHFSA0A0A6YYL1 179 aa29.65■■■□□ 2.34
TOP1MT-206ENST00000518951 MSH6P52701 1360 aa29.65■■■□□ 2.34
TOP1MT-206ENST00000518951 ADGRB2O60241 1585 aa29.62■■■□□ 2.33
TOP1MT-206ENST00000518951 CDC42BPGQ6DT37 1551 aa29.6■■■□□ 2.33
TOP1MT-206ENST00000518951 HSPA5P11021 654 aaKnown RBP29.59■■■□□ 2.33
TOP1MT-206ENST00000518951 DCCP43146 1447 aa29.58■■■□□ 2.33
TOP1MT-206ENST00000518951 EIF4G2P78344 907 aaKnown RBP eCLIP29.58■■■□□ 2.336e-7■■■■■ 46
TOP1MT-206ENST00000518951 TESK2Q96S53 571 aa29.58■■■□□ 2.33
TOP1MT-206ENST00000518951 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
TOP1MT-206ENST00000518951 ATF3P18847 181 aa29.56■■■□□ 2.32
TOP1MT-206ENST00000518951 SBNO2Q9Y2G9 1366 aa29.55■■■□□ 2.32
TOP1MT-206ENST00000518951 TULP4Q9NRJ4 1543 aa29.55■■■□□ 2.32
TOP1MT-206ENST00000518951 WASLO00401 505 aaPredicted RBP29.55■■■□□ 2.32
TOP1MT-206ENST00000518951 CADPS2Q86UW7 1296 aa29.55■■■□□ 2.32
TOP1MT-206ENST00000518951 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
TOP1MT-206ENST00000518951 MST1RQ04912 1400 aa29.52■■■□□ 2.32
TOP1MT-206ENST00000518951 NUTM2FA1L443 756 aa29.52■■■□□ 2.32
TOP1MT-206ENST00000518951 CDK19Q9BWU1 502 aa29.51■■■□□ 2.31
TOP1MT-206ENST00000518951 USP32Q8NFA0 1604 aa29.5■■■□□ 2.31
TOP1MT-206ENST00000518951 UBAP1LF5GYI3 381 aa29.5■■■□□ 2.31
TOP1MT-206ENST00000518951 SLAIN2Q9P270 581 aa29.48■■■□□ 2.31
TOP1MT-206ENST00000518951 TOM1O60784 492 aa29.48■■■□□ 2.31
TOP1MT-206ENST00000518951 C1orf167Q5SNV9 1468 aa29.46■■■□□ 2.31
TOP1MT-206ENST00000518951 EVC2Q86UK5 1308 aa29.46■■■□□ 2.31
TOP1MT-206ENST00000518951 PRR36Q9H6K5 1346 aa29.46■■■□□ 2.31
TOP1MT-206ENST00000518951 CABP2Q9NPB3 220 aa29.46■■■□□ 2.31
TOP1MT-206ENST00000518951 DISP3Q9P2K9 1392 aa29.44■■■□□ 2.3
TOP1MT-206ENST00000518951 SRPK2P78362 688 aaKnown RBP29.42■■■□□ 2.3
TOP1MT-206ENST00000518951 ATP7BP35670 1465 aa29.42■■■□□ 2.3
TOP1MT-206ENST00000518951 PIP4K2BP78356 416 aa29.41■■■□□ 2.3
TOP1MT-206ENST00000518951 NUDT16Q96DE0 195 aaKnown RBP29.41■■■□□ 2.3
TOP1MT-206ENST00000518951 ORAI2Q96SN7 254 aa29.41■■■□□ 2.3
TOP1MT-206ENST00000518951 ANKARQ7Z5J8 1434 aa29.41■■■□□ 2.3
TOP1MT-206ENST00000518951 TMF1P82094 1093 aa29.4■■■□□ 2.3
TOP1MT-206ENST00000518951 ROBO1Q9Y6N7 1651 aa29.39■■■□□ 2.3
TOP1MT-206ENST00000518951 TOPAZ1Q8N9V7 1692 aa29.38■■■□□ 2.29
TOP1MT-206ENST00000518951 C11orf95C9JLR9 678 aaPredicted RBP29.37■■■□□ 2.29
TOP1MT-206ENST00000518951 SLC24A1O60721 1099 aa29.37■■■□□ 2.29
TOP1MT-206ENST00000518951 ESCO1Q5FWF5 840 aa29.36■■■□□ 2.29
TOP1MT-206ENST00000518951 BRINP3Q76B58 766 aa29.36■■■□□ 2.29
TOP1MT-206ENST00000518951 ITSN1Q15811 1721 aa29.36■■■□□ 2.29
TOP1MT-206ENST00000518951 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
TOP1MT-206ENST00000518951 CCDC61Q9Y6R9 512 aa29.33■■■□□ 2.29
TOP1MT-206ENST00000518951 PUS7Q96PZ0 661 aaKnown RBP29.31■■■□□ 2.28
TOP1MT-206ENST00000518951 PHF8Q9UPP1 1060 aa29.31■■■□□ 2.28
TOP1MT-206ENST00000518951 PMFBP1Q8TBY8 1022 aa29.3■■■□□ 2.28
TOP1MT-206ENST00000518951 PPIP5K1Q6PFW1 1433 aa29.3■■■□□ 2.28
TOP1MT-206ENST00000518951 ATAD2Q6PL18 1390 aa29.3■■■□□ 2.28
TOP1MT-206ENST00000518951 KIF1AQ12756 1690 aa29.29■■■□□ 2.28
TOP1MT-206ENST00000518951 DDX17Q92841 729 aaKnown RBP29.29■■■□□ 2.28
TOP1MT-206ENST00000518951 FBXO41Q8TF61 875 aa29.28■■■□□ 2.28
TOP1MT-206ENST00000518951 CABP1Q9NZU7 370 aa29.28■■■□□ 2.28
TOP1MT-206ENST00000518951 NHSL1Q5SYE7 1610 aa29.27■■■□□ 2.28
TOP1MT-206ENST00000518951 PLEKHG3A1L390 1219 aa29.26■■■□□ 2.27
TOP1MT-206ENST00000518951 CDCA8Q53HL2 280 aa29.26■■■□□ 2.27
TOP1MT-206ENST00000518951 MYOM1P52179 1685 aa29.25■■■□□ 2.27
TOP1MT-206ENST00000518951 FOXO3O43524 673 aa29.24■■■□□ 2.27
TOP1MT-206ENST00000518951 POLR3GLQ9BT43 218 aa29.24■■■□□ 2.27
TOP1MT-206ENST00000518951 SLC12A5Q9H2X9 1139 aa29.23■■■□□ 2.27
TOP1MT-206ENST00000518951 KIF7Q2M1P5 1343 aa29.23■■■□□ 2.27
TOP1MT-206ENST00000518951 ACEP12821 1306 aa29.22■■■□□ 2.27
TOP1MT-206ENST00000518951 AHDC1Q5TGY3 1603 aaPredicted RBP29.22■■■□□ 2.27
TOP1MT-206ENST00000518951 TMC1Q8TDI8 760 aa29.22■■■□□ 2.27
TOP1MT-206ENST00000518951 POLR3AO14802 1390 aaPredicted RBP29.2■■■□□ 2.27
TOP1MT-206ENST00000518951 NGDNQ8NEJ9 315 aaKnown RBP29.2■■■□□ 2.26
TOP1MT-206ENST00000518951 PHLPP1O60346 1717 aa29.2■■■□□ 2.26
TOP1MT-206ENST00000518951 WASHC2AQ641Q2 1341 aa29.2■■■□□ 2.26
TOP1MT-206ENST00000518951 AKAP12Q02952 1782 aa29.2■■■□□ 2.26
TOP1MT-206ENST00000518951 CD163L1Q9NR16 1453 aa29.19■■■□□ 2.26
TOP1MT-206ENST00000518951 XPCQ01831 940 aaPredicted RBP29.18■■■□□ 2.26
TOP1MT-206ENST00000518951 CCDC7Q96M83 1385 aa29.18■■■□□ 2.26
TOP1MT-206ENST00000518951 NPHP3Q7Z494 1330 aa29.17■■■□□ 2.26
TOP1MT-206ENST00000518951 PXDNQ92626 1479 aa29.16■■■□□ 2.26
TOP1MT-206ENST00000518951 COL16A1Q07092 1604 aaPredicted RBP29.15■■■□□ 2.26
TOP1MT-206ENST00000518951 CPSF1Q10570 1443 aaKnown RBP29.15■■■□□ 2.26
TOP1MT-206ENST00000518951 HSPA1LP34931 641 aa29.15■■■□□ 2.26
TOP1MT-206ENST00000518951 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
TOP1MT-206ENST00000518951 SOS2Q07890 1332 aaPredicted RBP29.15■■■□□ 2.26
TOP1MT-206ENST00000518951 PSME1Q06323 249 aa29.14■■■□□ 2.26
TOP1MT-206ENST00000518951 NINLQ9Y2I6 1382 aa29.14■■■□□ 2.25
TOP1MT-206ENST00000518951 TRPM3Q9HCF6 1732 aaPredicted RBP29.13■■■□□ 2.25
TOP1MT-206ENST00000518951 MON2Q7Z3U7 1717 aa29.12■■■□□ 2.25
TOP1MT-206ENST00000518951 A0A1W2PP64 1363 aa29.11■■■□□ 2.25
TOP1MT-206ENST00000518951 USP6P35125 1406 aa29.09■■■□□ 2.25
TOP1MT-206ENST00000518951 ANKRD36BQ8N2N9 1353 aa29.08■■■□□ 2.25
TOP1MT-206ENST00000518951 ZNF692Q9BU19 519 aaPredicted RBP29.08■■■□□ 2.25
TOP1MT-206ENST00000518951 TERF2IPQ9NYB0 399 aa29.08■■■□□ 2.25
TOP1MT-206ENST00000518951 KTN1Q86UP2 1357 aaKnown RBP29.07■■■□□ 2.24
TOP1MT-206ENST00000518951 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
TOP1MT-206ENST00000518951 SSH2Q76I76 1423 aa29.07■■■□□ 2.24
TOP1MT-206ENST00000518951 NRKQ7Z2Y5 1582 aa29.06■■■□□ 2.24
TOP1MT-206ENST00000518951 ALS2Q96Q42 1657 aa29.04■■■□□ 2.24
TOP1MT-206ENST00000518951 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms