RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.94
TSNARE1-203ENST00000518928 PNPLA6Q8IY17 1366 aa20.89■□□□□ 0.93
TSNARE1-203ENST00000518928 NUTM2FA1L443 756 aa20.89■□□□□ 0.93
TSNARE1-203ENST00000518928 LAMC1P11047 1609 aa20.89■□□□□ 0.93
TSNARE1-203ENST00000518928 CDC42BPGQ6DT37 1551 aa20.89■□□□□ 0.93
TSNARE1-203ENST00000518928 MYOM2P54296 1465 aa20.88■□□□□ 0.93
TSNARE1-203ENST00000518928 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
TSNARE1-203ENST00000518928 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
TSNARE1-203ENST00000518928 MEX3CQ5U5Q3 659 aaKnown RBP20.85■□□□□ 0.93
TSNARE1-203ENST00000518928 SOS2Q07890 1332 aaPredicted RBP20.84■□□□□ 0.93
TSNARE1-203ENST00000518928 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
TSNARE1-203ENST00000518928 ACIN1Q9UKV3 1341 aaKnown RBP20.83■□□□□ 0.93
TSNARE1-203ENST00000518928 HRCP23327 699 aa20.83■□□□□ 0.93
TSNARE1-203ENST00000518928 LRRC59Q96AG4 307 aaKnown RBP20.83■□□□□ 0.93
TSNARE1-203ENST00000518928 ADGRB1O14514 1584 aa20.82■□□□□ 0.92
TSNARE1-203ENST00000518928 DHX57Q6P158 1386 aaKnown RBP20.82■□□□□ 0.92
TSNARE1-203ENST00000518928 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
TSNARE1-203ENST00000518928 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
TSNARE1-203ENST00000518928 ESCO1Q5FWF5 840 aa20.81■□□□□ 0.92
TSNARE1-203ENST00000518928 KDM2AQ9Y2K7 1162 aa20.81■□□□□ 0.92
TSNARE1-203ENST00000518928 PXDNQ92626 1479 aa20.81■□□□□ 0.92
TSNARE1-203ENST00000518928 AFF2P51816 1311 aa20.78■□□□□ 0.92
TSNARE1-203ENST00000518928 FOXO3O43524 673 aa20.78■□□□□ 0.92
TSNARE1-203ENST00000518928 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
TSNARE1-203ENST00000518928 ADAMTS2O95450 1211 aa20.77■□□□□ 0.92
TSNARE1-203ENST00000518928 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
TSNARE1-203ENST00000518928 PRAM1Q96QH2 718 aa20.77■□□□□ 0.92
TSNARE1-203ENST00000518928 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.91
TSNARE1-203ENST00000518928 C8orf37Q96NL8 207 aa20.76■□□□□ 0.91
TSNARE1-203ENST00000518928 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
TSNARE1-203ENST00000518928 TRAK1Q9UPV9 953 aa20.73■□□□□ 0.91
TSNARE1-203ENST00000518928 USP32Q8NFA0 1604 aa20.73■□□□□ 0.91
TSNARE1-203ENST00000518928 COL22A1Q8NFW1 1626 aaPredicted RBP20.73■□□□□ 0.91
TSNARE1-203ENST00000518928 SIRT1Q96EB6 747 aa20.72■□□□□ 0.91
TSNARE1-203ENST00000518928 DLC1Q96QB1 1528 aa20.72■□□□□ 0.91
TSNARE1-203ENST00000518928 HIRIP3Q9BW71 556 aaPredicted RBP20.71■□□□□ 0.91
TSNARE1-203ENST00000518928 NPHP3Q7Z494 1330 aa20.71■□□□□ 0.91
TSNARE1-203ENST00000518928 MINK1Q8N4C8 1332 aaPredicted RBP20.67■□□□□ 0.9
TSNARE1-203ENST00000518928 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
TSNARE1-203ENST00000518928 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
TSNARE1-203ENST00000518928 RXRBP28702 533 aa20.66■□□□□ 0.9
TSNARE1-203ENST00000518928 NGLY1Q96IV0 654 aa20.66■□□□□ 0.9
TSNARE1-203ENST00000518928 POGKQ9P215 609 aa20.66■□□□□ 0.9
TSNARE1-203ENST00000518928 RGS12O14924 1447 aa20.66■□□□□ 0.9
TSNARE1-203ENST00000518928 KIF1AQ12756 1690 aa20.66■□□□□ 0.9
TSNARE1-203ENST00000518928 QTRT2Q9H974 415 aaKnown RBP20.65■□□□□ 0.9
TSNARE1-203ENST00000518928 ARHGEF28Q8N1W1 1705 aaKnown RBP20.64■□□□□ 0.9
TSNARE1-203ENST00000518928 SPATA31A3Q5VYP0 1347 aa20.64■□□□□ 0.89
TSNARE1-203ENST00000518928 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
TSNARE1-203ENST00000518928 KRT28Q7Z3Y7 464 aa20.64■□□□□ 0.89
TSNARE1-203ENST00000518928 PMFBP1Q8TBY8 1022 aa20.64■□□□□ 0.89
TSNARE1-203ENST00000518928 PHF8Q9UPP1 1060 aa20.64■□□□□ 0.89
TSNARE1-203ENST00000518928 NBPF1Q3BBV0 1214 aa20.61■□□□□ 0.89
TSNARE1-203ENST00000518928 CABLES1Q8TDN4 633 aa20.61■□□□□ 0.89
TSNARE1-203ENST00000518928 FNBP4Q8N3X1 1017 aaPredicted RBP20.6■□□□□ 0.89
TSNARE1-203ENST00000518928 USP21Q9UK80 565 aa20.6■□□□□ 0.89
TSNARE1-203ENST00000518928 MARF1Q9Y4F3 1742 aaKnown RBP20.6■□□□□ 0.89
TSNARE1-203ENST00000518928 BCL9LQ86UU0 1499 aa20.6■□□□□ 0.89
TSNARE1-203ENST00000518928 CDK12Q9NYV4 1490 aaPredicted RBP20.59■□□□□ 0.89
TSNARE1-203ENST00000518928 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
TSNARE1-203ENST00000518928 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.89
TSNARE1-203ENST00000518928 ATRNO75882 1429 aa20.58■□□□□ 0.88
TSNARE1-203ENST00000518928 TNS3Q68CZ2 1445 aa20.58■□□□□ 0.88
TSNARE1-203ENST00000518928 ANKARQ7Z5J8 1434 aa20.58■□□□□ 0.88
TSNARE1-203ENST00000518928 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.88
TSNARE1-203ENST00000518928 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
TSNARE1-203ENST00000518928 TRPM3Q9HCF6 1732 aaPredicted RBP20.57■□□□□ 0.88
TSNARE1-203ENST00000518928 ABCA3Q99758 1704 aa20.56■□□□□ 0.88
TSNARE1-203ENST00000518928 WASLO00401 505 aaPredicted RBP20.56■□□□□ 0.88
TSNARE1-203ENST00000518928 ATP7BP35670 1465 aa20.54■□□□□ 0.88
TSNARE1-203ENST00000518928 LMOD2Q6P5Q4 547 aa20.53■□□□□ 0.88
TSNARE1-203ENST00000518928 STAC3Q96MF2 364 aa20.53■□□□□ 0.88
TSNARE1-203ENST00000518928 KIAA1210Q9ULL0 1709 aa20.53■□□□□ 0.88
TSNARE1-203ENST00000518928 SBNO1A3KN83 1393 aa20.52■□□□□ 0.88
TSNARE1-203ENST00000518928 PSME1Q06323 249 aa20.52■□□□□ 0.88
TSNARE1-203ENST00000518928 L3MBTL2Q969R5 705 aa20.52■□□□□ 0.88
TSNARE1-203ENST00000518928 SLIT2O94813 1529 aa20.52■□□□□ 0.87
TSNARE1-203ENST00000518928 PCGF6Q9BYE7 350 aa20.51■□□□□ 0.87
TSNARE1-203ENST00000518928 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
TSNARE1-203ENST00000518928 ALS2Q96Q42 1657 aa20.51■□□□□ 0.87
TSNARE1-203ENST00000518928 GLI3P10071 1580 aa20.49■□□□□ 0.87
TSNARE1-203ENST00000518928 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
TSNARE1-203ENST00000518928 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
TSNARE1-203ENST00000518928 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
TSNARE1-203ENST00000518928 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
TSNARE1-203ENST00000518928 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
TSNARE1-203ENST00000518928 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
TSNARE1-203ENST00000518928 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
TSNARE1-203ENST00000518928 RALGAPBQ86X10 1494 aa20.45■□□□□ 0.86
TSNARE1-203ENST00000518928 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
TSNARE1-203ENST00000518928 EP400Q96L91 3159 aa20.44■□□□□ 0.86
TSNARE1-203ENST00000518928 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
TSNARE1-203ENST00000518928 UNC5CLQ8IV45 518 aa20.44■□□□□ 0.86
TSNARE1-203ENST00000518928 GJD4Q96KN9 370 aaPredicted RBP20.44■□□□□ 0.86
TSNARE1-203ENST00000518928 HAP1P54257 671 aaPredicted RBP20.43■□□□□ 0.86
TSNARE1-203ENST00000518928 NGDNQ8NEJ9 315 aaKnown RBP20.43■□□□□ 0.86
TSNARE1-203ENST00000518928 EIF3AQ14152 1382 aaKnown RBP20.43■□□□□ 0.86
TSNARE1-203ENST00000518928 TRPM1Q7Z4N2 1603 aa20.42■□□□□ 0.86
TSNARE1-203ENST00000518928 ITSN1Q15811 1721 aa20.42■□□□□ 0.86
TSNARE1-203ENST00000518928 GPRASP1Q5JY77 1395 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms