RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 KIAA1210Q9ULL0 1709 aa23.38■■□□□ 1.33
ARFGAP1-209ENST00000518794 ABCA9Q8IUA7 1624 aa23.38■■□□□ 1.33
ARFGAP1-209ENST00000518794 MTHFSP49914 203 aa23.38■■□□□ 1.33
ARFGAP1-209ENST00000518794 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
ARFGAP1-209ENST00000518794 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
ARFGAP1-209ENST00000518794 RLBP1P12271 317 aa23.37■■□□□ 1.33
ARFGAP1-209ENST00000518794 EFCAB6Q5THR3 1501 aa23.37■■□□□ 1.33
ARFGAP1-209ENST00000518794 POLR3AO14802 1390 aaPredicted RBP23.36■■□□□ 1.33
ARFGAP1-209ENST00000518794 KIF1BO60333 1816 aa23.36■■□□□ 1.33
ARFGAP1-209ENST00000518794 ASXL2Q76L83 1435 aa23.35■■□□□ 1.33
ARFGAP1-209ENST00000518794 RARSP54136 660 aaKnown RBP23.33■■□□□ 1.33
ARFGAP1-209ENST00000518794 RUNDC1Q96C34 613 aa23.33■■□□□ 1.33
ARFGAP1-209ENST00000518794 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.33
ARFGAP1-209ENST00000518794 PDE3AQ14432 1141 aa23.33■■□□□ 1.33
ARFGAP1-209ENST00000518794 C14orf93Q9H972 538 aaKnown RBP23.32■■□□□ 1.32
ARFGAP1-209ENST00000518794 FRAT2O75474 233 aaPredicted RBP23.32■■□□□ 1.32
ARFGAP1-209ENST00000518794 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
ARFGAP1-209ENST00000518794 USP19O94966 1318 aa23.31■■□□□ 1.32
ARFGAP1-209ENST00000518794 KIDINS220Q9ULH0 1771 aa23.31■■□□□ 1.32
ARFGAP1-209ENST00000518794 NPATQ14207 1427 aa23.31■■□□□ 1.32
ARFGAP1-209ENST00000518794 CABP2Q9NPB3 220 aa23.31■■□□□ 1.32
ARFGAP1-209ENST00000518794 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
ARFGAP1-209ENST00000518794 GSE1Q14687 1217 aa23.3■■□□□ 1.32
ARFGAP1-209ENST00000518794 IFT172Q9UG01 1749 aa23.29■■□□□ 1.32
ARFGAP1-209ENST00000518794 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
ARFGAP1-209ENST00000518794 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.328e-11■■□□□ 11.7
ARFGAP1-209ENST00000518794 SBNO2Q9Y2G9 1366 aa23.28■■□□□ 1.32
ARFGAP1-209ENST00000518794 SHPRHQ149N8 1683 aa23.27■■□□□ 1.32
ARFGAP1-209ENST00000518794 STK26Q9P289 416 aa23.27■■□□□ 1.32
ARFGAP1-209ENST00000518794 ADGRB3O60242 1522 aa23.26■■□□□ 1.31
ARFGAP1-209ENST00000518794 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
ARFGAP1-209ENST00000518794 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
ARFGAP1-209ENST00000518794 NEURL4Q96JN8 1562 aa23.25■■□□□ 1.31
ARFGAP1-209ENST00000518794 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
ARFGAP1-209ENST00000518794 NGEFQ8N5V2 710 aa23.24■■□□□ 1.31
ARFGAP1-209ENST00000518794 QRICH2Q9H0J4 1663 aa23.24■■□□□ 1.31
ARFGAP1-209ENST00000518794 MYO3AQ8NEV4 1616 aa23.23■■□□□ 1.31
ARFGAP1-209ENST00000518794 ADGRB1O14514 1584 aa23.22■■□□□ 1.31
ARFGAP1-209ENST00000518794 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
ARFGAP1-209ENST00000518794 CFAP53Q96M91 514 aa23.22■■□□□ 1.31
ARFGAP1-209ENST00000518794 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
ARFGAP1-209ENST00000518794 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
ARFGAP1-209ENST00000518794 SLKQ9H2G2 1235 aaPredicted RBP23.21■■□□□ 1.31
ARFGAP1-209ENST00000518794 U2SURPO15042 1029 aaKnown RBP23.21■■□□□ 1.31
ARFGAP1-209ENST00000518794 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
ARFGAP1-209ENST00000518794 GGNBP2Q9H3C7 697 aa23.2■■□□□ 1.3
ARFGAP1-209ENST00000518794 WDR63Q8IWG1 891 aa23.19■■□□□ 1.3
ARFGAP1-209ENST00000518794 MAPK8IP3Q9UPT6 1336 aa23.19■■□□□ 1.3
ARFGAP1-209ENST00000518794 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
ARFGAP1-209ENST00000518794 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
ARFGAP1-209ENST00000518794 LMTK2Q8IWU2 1503 aa23.17■■□□□ 1.3
ARFGAP1-209ENST00000518794 FRMPD1Q5SYB0 1578 aa23.17■■□□□ 1.3
ARFGAP1-209ENST00000518794 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
ARFGAP1-209ENST00000518794 PPLO60437 1756 aa23.16■■□□□ 1.3
ARFGAP1-209ENST00000518794 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
ARFGAP1-209ENST00000518794 NPM1P06748 294 aaKnown RBP eCLIP23.16■■□□□ 1.3
ARFGAP1-209ENST00000518794 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
ARFGAP1-209ENST00000518794 ZMYND15Q9H091 742 aa23.15■■□□□ 1.3
ARFGAP1-209ENST00000518794 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.3
ARFGAP1-209ENST00000518794 TULP4Q9NRJ4 1543 aa23.14■■□□□ 1.3
ARFGAP1-209ENST00000518794 CD109Q6YHK3 1445 aa23.14■■□□□ 1.3
ARFGAP1-209ENST00000518794 VSIG10Q8N0Z9 540 aa23.14■■□□□ 1.29
ARFGAP1-209ENST00000518794 EXOSC9Q06265 439 aaKnown RBP23.13■■□□□ 1.29
ARFGAP1-209ENST00000518794 MYH16Q9H6N6 1097 aa23.13■■□□□ 1.29
ARFGAP1-209ENST00000518794 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
ARFGAP1-209ENST00000518794 SPRYD3Q8NCJ5 442 aa23.13■■□□□ 1.29
ARFGAP1-209ENST00000518794 MINK1Q8N4C8 1332 aaPredicted RBP23.12■■□□□ 1.29
ARFGAP1-209ENST00000518794 POGZQ7Z3K3 1410 aa23.12■■□□□ 1.29
ARFGAP1-209ENST00000518794 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
ARFGAP1-209ENST00000518794 IDI1Q13907 227 aa23.12■■□□□ 1.29
ARFGAP1-209ENST00000518794 SMC4Q9NTJ3 1288 aa23.11■■□□□ 1.29
ARFGAP1-209ENST00000518794 GLI2P10070 1586 aa23.11■■□□□ 1.29
ARFGAP1-209ENST00000518794 MVPQ14764 893 aaKnown RBP23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 CCDC27Q2M243 656 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 A0A1W2PP64 1363 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 NLRP1Q9C000 1473 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 FBLN1P23142 703 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 FAM43AQ8N2R8 423 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 ABCC3O15438 1527 aa23.1■■□□□ 1.29
ARFGAP1-209ENST00000518794 RPGRIP1LQ68CZ1 1315 aa23.09■■□□□ 1.29
ARFGAP1-209ENST00000518794 ZKSCAN2Q63HK3 967 aa23.09■■□□□ 1.29
ARFGAP1-209ENST00000518794 GLIPR1L2Q4G1C9 344 aa23.09■■□□□ 1.29
ARFGAP1-209ENST00000518794 DZIP1LQ8IYY4 767 aaKnown RBP23.09■■□□□ 1.29
ARFGAP1-209ENST00000518794 RWDD1Q9H446 243 aaPredicted RBP23.09■■□□□ 1.29
ARFGAP1-209ENST00000518794 SSH1Q8WYL5 1049 aa23.08■■□□□ 1.28
ARFGAP1-209ENST00000518794 SIGLEC1Q9BZZ2 1709 aa23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 POGKQ9P215 609 aa23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 TRIM35Q9UPQ4 493 aa23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 TRIM27P14373 513 aa23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 ITPRIPQ8IWB1 547 aa23.07■■□□□ 1.28
ARFGAP1-209ENST00000518794 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
ARFGAP1-209ENST00000518794 PLEKHF1Q96S99 279 aa23.06■■□□□ 1.28
ARFGAP1-209ENST00000518794 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
ARFGAP1-209ENST00000518794 BECN1Q14457 450 aa23.05■■□□□ 1.28
ARFGAP1-209ENST00000518794 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
ARFGAP1-209ENST00000518794 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
ARFGAP1-209ENST00000518794 FYB1O15117 783 aa23.04■■□□□ 1.28
ARFGAP1-209ENST00000518794 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms