RNA–Protein interactions for RNA: ENST00000518442.5

EIF3E-204, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

TSL 1 (best)

Gene EIF3E, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-204ENST00000518442 NWD1Q149M9 1564 aa12.86□□□□□ -0.35
EIF3E-204ENST00000518442 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
EIF3E-204ENST00000518442 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
EIF3E-204ENST00000518442 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
EIF3E-204ENST00000518442 C14orf93Q9H972 538 aaKnown RBP12.85□□□□□ -0.35
EIF3E-204ENST00000518442 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
EIF3E-204ENST00000518442 PIK3R4Q99570 1358 aa12.84□□□□□ -0.35
EIF3E-204ENST00000518442 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
EIF3E-204ENST00000518442 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
EIF3E-204ENST00000518442 NKTRP30414 1462 aaKnown RBP12.84□□□□□ -0.35
EIF3E-204ENST00000518442 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
EIF3E-204ENST00000518442 XRN1Q8IZH2 1706 aaKnown RBP12.83□□□□□ -0.36
EIF3E-204ENST00000518442 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
EIF3E-204ENST00000518442 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
EIF3E-204ENST00000518442 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
EIF3E-204ENST00000518442 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
EIF3E-204ENST00000518442 PRAG1Q86YV5 1406 aa12.81□□□□□ -0.36
EIF3E-204ENST00000518442 YTHDC2Q9H6S0 1430 aaKnown RBP12.81□□□□□ -0.36
EIF3E-204ENST00000518442 HAX1O00165 279 aa12.81□□□□□ -0.36
EIF3E-204ENST00000518442 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
EIF3E-204ENST00000518442 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
EIF3E-204ENST00000518442 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
EIF3E-204ENST00000518442 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
EIF3E-204ENST00000518442 MSH6P52701 1360 aa12.8□□□□□ -0.36
EIF3E-204ENST00000518442 TOM1O60784 492 aa12.79□□□□□ -0.36
EIF3E-204ENST00000518442 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
EIF3E-204ENST00000518442 LAMC1P11047 1609 aa12.78□□□□□ -0.36
EIF3E-204ENST00000518442 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
EIF3E-204ENST00000518442 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
EIF3E-204ENST00000518442 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
EIF3E-204ENST00000518442 ADGRB1O14514 1584 aa12.77□□□□□ -0.36
EIF3E-204ENST00000518442 POGKQ9P215 609 aa12.77□□□□□ -0.37
EIF3E-204ENST00000518442 ATF3P18847 181 aa12.76□□□□□ -0.37
EIF3E-204ENST00000518442 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
EIF3E-204ENST00000518442 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
EIF3E-204ENST00000518442 ABCC11Q96J66 1382 aa12.76□□□□□ -0.37
EIF3E-204ENST00000518442 PTCH1Q13635 1447 aa12.76□□□□□ -0.37
EIF3E-204ENST00000518442 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
EIF3E-204ENST00000518442 MINK1Q8N4C8 1332 aaPredicted RBP12.75□□□□□ -0.37
EIF3E-204ENST00000518442 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
EIF3E-204ENST00000518442 HIRIP3Q9BW71 556 aaPredicted RBP12.75□□□□□ -0.37
EIF3E-204ENST00000518442 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.75□□□□□ -0.37
EIF3E-204ENST00000518442 ADGRL3Q9HAR2 1447 aa12.74□□□□□ -0.37
EIF3E-204ENST00000518442 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
EIF3E-204ENST00000518442 TECPR2O15040 1411 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 CLSPNQ9HAW4 1339 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 FKBP8Q14318 412 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 SLAIN2Q9P270 581 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
EIF3E-204ENST00000518442 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
EIF3E-204ENST00000518442 SSUH2Q9Y2M2 353 aa12.72□□□□□ -0.37
EIF3E-204ENST00000518442 HSPA1LP34931 641 aa12.71□□□□□ -0.37
EIF3E-204ENST00000518442 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
EIF3E-204ENST00000518442 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.38
EIF3E-204ENST00000518442 NCOA3Q9Y6Q9 1424 aa12.71□□□□□ -0.38
EIF3E-204ENST00000518442 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
EIF3E-204ENST00000518442 DDX17Q92841 729 aaKnown RBP12.7□□□□□ -0.38
EIF3E-204ENST00000518442 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
EIF3E-204ENST00000518442 ARHGEF28Q8N1W1 1705 aaKnown RBP12.69□□□□□ -0.38
EIF3E-204ENST00000518442 SPDYE4A6NLX3 237 aa12.69□□□□□ -0.38
EIF3E-204ENST00000518442 ORAI2Q96SN7 254 aa12.69□□□□□ -0.38
EIF3E-204ENST00000518442 DLC1Q96QB1 1528 aa12.68□□□□□ -0.38
EIF3E-204ENST00000518442 ROBO1Q9Y6N7 1651 aa12.68□□□□□ -0.38
EIF3E-204ENST00000518442 MST1RQ04912 1400 aa12.68□□□□□ -0.38
EIF3E-204ENST00000518442 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
EIF3E-204ENST00000518442 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
EIF3E-204ENST00000518442 SIRT1Q96EB6 747 aa12.67□□□□□ -0.38
EIF3E-204ENST00000518442 RALGAPBQ86X10 1494 aa12.66□□□□□ -0.38
EIF3E-204ENST00000518442 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
EIF3E-204ENST00000518442 DCCP43146 1447 aa12.66□□□□□ -0.38
EIF3E-204ENST00000518442 ESCO1Q5FWF5 840 aa12.66□□□□□ -0.38
EIF3E-204ENST00000518442 C1orf167Q5SNV9 1468 aa12.65□□□□□ -0.38
EIF3E-204ENST00000518442 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.38
EIF3E-204ENST00000518442 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
EIF3E-204ENST00000518442 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
EIF3E-204ENST00000518442 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
EIF3E-204ENST00000518442 PMFBP1Q8TBY8 1022 aa12.63□□□□□ -0.39
EIF3E-204ENST00000518442 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
EIF3E-204ENST00000518442 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
EIF3E-204ENST00000518442 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
EIF3E-204ENST00000518442 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
EIF3E-204ENST00000518442 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
EIF3E-204ENST00000518442 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
EIF3E-204ENST00000518442 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
EIF3E-204ENST00000518442 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
EIF3E-204ENST00000518442 PRR36Q9H6K5 1346 aa12.62□□□□□ -0.39
EIF3E-204ENST00000518442 FOXO3O43524 673 aa12.61□□□□□ -0.39
EIF3E-204ENST00000518442 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
EIF3E-204ENST00000518442 PHLPP1O60346 1717 aa12.6□□□□□ -0.39
EIF3E-204ENST00000518442 EIF3AQ14152 1382 aaKnown RBP12.6□□□□□ -0.39
EIF3E-204ENST00000518442 ST20-MTHFSA0A0A6YYL1 179 aa12.6□□□□□ -0.39
EIF3E-204ENST00000518442 USP47Q96K76 1375 aa12.59□□□□□ -0.39
EIF3E-204ENST00000518442 NUDT16Q96DE0 195 aaKnown RBP12.59□□□□□ -0.39
EIF3E-204ENST00000518442 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
EIF3E-204ENST00000518442 ADGRB2O60241 1585 aa12.59□□□□□ -0.39
EIF3E-204ENST00000518442 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
EIF3E-204ENST00000518442 TULP4Q9NRJ4 1543 aa12.57□□□□□ -0.4
EIF3E-204ENST00000518442 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
EIF3E-204ENST00000518442 EVC2Q86UK5 1308 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms