RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 IFT172Q9UG01 1749 aa20.79■□□□□ 0.92
TVP23C-205ENST00000518321 CDC42BPGQ6DT37 1551 aa20.79■□□□□ 0.92
TVP23C-205ENST00000518321 CDK12Q9NYV4 1490 aaPredicted RBP20.78■□□□□ 0.92
TVP23C-205ENST00000518321 STK26Q9P289 416 aa20.78■□□□□ 0.92
TVP23C-205ENST00000518321 TECPR2O15040 1411 aa20.78■□□□□ 0.92
TVP23C-205ENST00000518321 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.92
TVP23C-205ENST00000518321 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 ADAMTS2O95450 1211 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 ESCO1Q5FWF5 840 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 NGLY1Q96IV0 654 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 NPHP3Q7Z494 1330 aa20.75■□□□□ 0.91
TVP23C-205ENST00000518321 TMEM132EQ6IEE7 984 aa20.74■□□□□ 0.91
TVP23C-205ENST00000518321 WAPLQ7Z5K2 1190 aa20.74■□□□□ 0.91
TVP23C-205ENST00000518321 UPF1Q92900 1129 aaKnown RBP eCLIP20.74■□□□□ 0.91
TVP23C-205ENST00000518321 QTRT2Q9H974 415 aaKnown RBP20.74■□□□□ 0.91
TVP23C-205ENST00000518321 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
TVP23C-205ENST00000518321 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
TVP23C-205ENST00000518321 YTHDC2Q9H6S0 1430 aaKnown RBP20.7■□□□□ 0.9
TVP23C-205ENST00000518321 COL22A1Q8NFW1 1626 aaPredicted RBP20.69■□□□□ 0.9
TVP23C-205ENST00000518321 FOXO3O43524 673 aa20.69■□□□□ 0.9
TVP23C-205ENST00000518321 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
TVP23C-205ENST00000518321 NUTM2FA1L443 756 aa20.68■□□□□ 0.9
TVP23C-205ENST00000518321 C14orf93Q9H972 538 aaKnown RBP20.68■□□□□ 0.9
TVP23C-205ENST00000518321 PXDNQ92626 1479 aa20.68■□□□□ 0.9
TVP23C-205ENST00000518321 MSH5O43196 834 aa20.67■□□□□ 0.9
TVP23C-205ENST00000518321 SIRT1Q96EB6 747 aa20.67■□□□□ 0.9
TVP23C-205ENST00000518321 USP21Q9UK80 565 aa20.67■□□□□ 0.9
TVP23C-205ENST00000518321 RGS12O14924 1447 aa20.67■□□□□ 0.9
TVP23C-205ENST00000518321 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
TVP23C-205ENST00000518321 MYOM2P54296 1465 aa20.66■□□□□ 0.9
TVP23C-205ENST00000518321 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
TVP23C-205ENST00000518321 FMN2Q9NZ56 1722 aa20.65■□□□□ 0.9
TVP23C-205ENST00000518321 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
TVP23C-205ENST00000518321 XPCQ01831 940 aaPredicted RBP20.65■□□□□ 0.9
TVP23C-205ENST00000518321 FNBP4Q8N3X1 1017 aaPredicted RBP20.65■□□□□ 0.9
TVP23C-205ENST00000518321 TRPC5Q9UL62 973 aaPredicted RBP20.65■□□□□ 0.9
TVP23C-205ENST00000518321 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.89
TVP23C-205ENST00000518321 KIF1AQ12756 1690 aa20.62■□□□□ 0.89
TVP23C-205ENST00000518321 ATRNO75882 1429 aa20.59■□□□□ 0.89
TVP23C-205ENST00000518321 MARF1Q9Y4F3 1742 aaKnown RBP20.58■□□□□ 0.89
TVP23C-205ENST00000518321 SPATA31A3Q5VYP0 1347 aa20.58■□□□□ 0.89
TVP23C-205ENST00000518321 PRAM1Q96QH2 718 aa20.58■□□□□ 0.89
TVP23C-205ENST00000518321 KRT28Q7Z3Y7 464 aa20.57■□□□□ 0.88
TVP23C-205ENST00000518321 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
TVP23C-205ENST00000518321 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
TVP23C-205ENST00000518321 POGKQ9P215 609 aa20.56■□□□□ 0.88
TVP23C-205ENST00000518321 DLC1Q96QB1 1528 aa20.56■□□□□ 0.88
TVP23C-205ENST00000518321 ATAD2Q6PL18 1390 aa20.56■□□□□ 0.88
TVP23C-205ENST00000518321 BCL9LQ86UU0 1499 aa20.56■□□□□ 0.88
TVP23C-205ENST00000518321 PSME1Q06323 249 aa20.55■□□□□ 0.88
TVP23C-205ENST00000518321 RGPD8O14715 1765 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-205ENST00000518321 TNS3Q68CZ2 1445 aa20.52■□□□□ 0.87
TVP23C-205ENST00000518321 ADGRB1O14514 1584 aa20.51■□□□□ 0.87
TVP23C-205ENST00000518321 HRCP23327 699 aa20.51■□□□□ 0.87
TVP23C-205ENST00000518321 DCAF11Q8TEB1 546 aa20.51■□□□□ 0.87
TVP23C-205ENST00000518321 STAC3Q96MF2 364 aa20.51■□□□□ 0.87
TVP23C-205ENST00000518321 KDM2AQ9Y2K7 1162 aa20.51■□□□□ 0.87
TVP23C-205ENST00000518321 HAP1P54257 671 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-205ENST00000518321 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-205ENST00000518321 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
TVP23C-205ENST00000518321 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
TVP23C-205ENST00000518321 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.5■□□□□ 0.87
TVP23C-205ENST00000518321 SBNO1A3KN83 1393 aa20.49■□□□□ 0.87
TVP23C-205ENST00000518321 UNC5CLQ8IV45 518 aa20.49■□□□□ 0.87
TVP23C-205ENST00000518321 ADGRB2O60241 1585 aa20.49■□□□□ 0.87
TVP23C-205ENST00000518321 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
TVP23C-205ENST00000518321 SLIT2O94813 1529 aa20.48■□□□□ 0.87
TVP23C-205ENST00000518321 ARHGEF10O15013 1369 aa20.47■□□□□ 0.87
TVP23C-205ENST00000518321 LMOD2Q6P5Q4 547 aa20.47■□□□□ 0.87
TVP23C-205ENST00000518321 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
TVP23C-205ENST00000518321 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
TVP23C-205ENST00000518321 HIRIP3Q9BW71 556 aaPredicted RBP20.46■□□□□ 0.87
TVP23C-205ENST00000518321 CABLES1Q8TDN4 633 aa20.45■□□□□ 0.86
TVP23C-205ENST00000518321 MINK1Q8N4C8 1332 aaPredicted RBP20.45■□□□□ 0.86
TVP23C-205ENST00000518321 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
TVP23C-205ENST00000518321 PLEKHG5O94827 1062 aa20.43■□□□□ 0.86
TVP23C-205ENST00000518321 CCDC125Q86Z20 511 aa20.42■□□□□ 0.86
TVP23C-205ENST00000518321 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
TVP23C-205ENST00000518321 GLI3P10071 1580 aa20.42■□□□□ 0.86
TVP23C-205ENST00000518321 WASLO00401 505 aaPredicted RBP20.41■□□□□ 0.86
TVP23C-205ENST00000518321 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
TVP23C-205ENST00000518321 ABCA3Q99758 1704 aa20.41■□□□□ 0.86
TVP23C-205ENST00000518321 NWD2Q9ULI1 1742 aa20.39■□□□□ 0.86
TVP23C-205ENST00000518321 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
TVP23C-205ENST00000518321 VPS72Q15906 364 aa20.39■□□□□ 0.85
TVP23C-205ENST00000518321 PLCH1Q4KWH8 1693 aa20.38■□□□□ 0.85
TVP23C-205ENST00000518321 EP400Q96L91 3159 aa20.38■□□□□ 0.85
TVP23C-205ENST00000518321 TRPM3Q9HCF6 1732 aaPredicted RBP20.38■□□□□ 0.85
TVP23C-205ENST00000518321 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
TVP23C-205ENST00000518321 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
TVP23C-205ENST00000518321 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
TVP23C-205ENST00000518321 ALS2Q96Q42 1657 aa20.35■□□□□ 0.85
TVP23C-205ENST00000518321 FAM83GA6ND36 823 aa20.35■□□□□ 0.85
TVP23C-205ENST00000518321 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
TVP23C-205ENST00000518321 ZRANB1Q9UGI0 708 aa20.33■□□□□ 0.85
TVP23C-205ENST00000518321 ITSN1Q15811 1721 aa20.33■□□□□ 0.84
TVP23C-205ENST00000518321 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
TVP23C-205ENST00000518321 ONECUT3O60422 494 aaPredicted RBP20.32■□□□□ 0.84
TVP23C-205ENST00000518321 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms