RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 LAPTM4BQ86VI4 370 aa10.04□□□□□ -0.8
CTNNA1-202ENST00000517533 ABL2P42684 1182 aa10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 IRF5Q13568 498 aa10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 RSPH4AQ5TD94 716 aa10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 LRRN4Q8WUT4 740 aa10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-202ENST00000517533 RNF40O75150 1001 aa10.02□□□□□ -0.81
CTNNA1-202ENST00000517533 MTMR2Q13614 643 aa10.02□□□□□ -0.81
CTNNA1-202ENST00000517533 EPS8L1Q8TE68 723 aa10.02□□□□□ -0.81
CTNNA1-202ENST00000517533 FAM163AQ96GL9 167 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-202ENST00000517533 HRO43593 1189 aa10.01□□□□□ -0.81
CTNNA1-202ENST00000517533 PUS10Q3MIT2 529 aaKnown RBP10.01□□□□□ -0.81
CTNNA1-202ENST00000517533 TK2O00142 265 aa10□□□□□ -0.81
CTNNA1-202ENST00000517533 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
CTNNA1-202ENST00000517533 ADGRD1Q6QNK2 874 aa10□□□□□ -0.81
CTNNA1-202ENST00000517533 NBPF3Q9H094 633 aa10□□□□□ -0.81
CTNNA1-202ENST00000517533 C6orf229H3BNL8 230 aa9.99□□□□□ -0.81
CTNNA1-202ENST00000517533 ATP6V1AP38606 617 aa9.99□□□□□ -0.81
CTNNA1-202ENST00000517533 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-202ENST00000517533 MORN1Q5T089 497 aa9.99□□□□□ -0.81
CTNNA1-202ENST00000517533 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-202ENST00000517533 ADAMTS19Q8TE59 1207 aa9.98□□□□□ -0.81
CTNNA1-202ENST00000517533 MRPL50Q8N5N7 158 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-202ENST00000517533 TSC1Q92574 1164 aa9.97□□□□□ -0.81
CTNNA1-202ENST00000517533 SLC27A5Q9Y2P5 690 aa9.97□□□□□ -0.81
CTNNA1-202ENST00000517533 PRR7Q8TB68 274 aa9.96□□□□□ -0.82
CTNNA1-202ENST00000517533 ACTN4O43707 911 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-202ENST00000517533 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
CTNNA1-202ENST00000517533 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
CTNNA1-202ENST00000517533 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
CTNNA1-202ENST00000517533 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
CTNNA1-202ENST00000517533 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-202ENST00000517533 SERPINA10Q9UK55 444 aa9.94□□□□□ -0.82
CTNNA1-202ENST00000517533 BCAMP50895 628 aa9.93□□□□□ -0.82
CTNNA1-202ENST00000517533 APLP1P51693 650 aa9.93□□□□□ -0.82
CTNNA1-202ENST00000517533 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-202ENST00000517533 GLMNQ92990 594 aa9.93□□□□□ -0.82
CTNNA1-202ENST00000517533 CCDC97Q96F63 343 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-202ENST00000517533 KMT5BQ4FZB7 885 aa9.92□□□□□ -0.82
CTNNA1-202ENST00000517533 GRIPAP1Q4V328 841 aa9.92□□□□□ -0.82
CTNNA1-202ENST00000517533 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
CTNNA1-202ENST00000517533 NR6A1Q15406 480 aa9.91□□□□□ -0.82
CTNNA1-202ENST00000517533 SOWAHBA6NEL2 793 aa9.9□□□□□ -0.82
CTNNA1-202ENST00000517533 VAC14Q08AM6 782 aa9.9□□□□□ -0.82
CTNNA1-202ENST00000517533 RETREG3Q86VR2 466 aa9.9□□□□□ -0.82
CTNNA1-202ENST00000517533 ANKRD13DQ6ZTN6 518 aa9.89□□□□□ -0.83
CTNNA1-202ENST00000517533 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-202ENST00000517533 HPS5Q9UPZ3 1129 aa9.89□□□□□ -0.83
CTNNA1-202ENST00000517533 THAP11Q96EK4 314 aa9.88□□□□□ -0.83
CTNNA1-202ENST00000517533 HDGFL1Q5TGJ6 251 aa9.87□□□□□ -0.83
CTNNA1-202ENST00000517533 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
CTNNA1-202ENST00000517533 PRM3Q9NNZ6 103 aa9.87□□□□□ -0.83
CTNNA1-202ENST00000517533 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
CTNNA1-202ENST00000517533 LYPD8Q6UX82 237 aa9.85□□□□□ -0.83
CTNNA1-202ENST00000517533 SCUBE3Q8IX30 993 aa9.85□□□□□ -0.83
CTNNA1-202ENST00000517533 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
CTNNA1-202ENST00000517533 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
CTNNA1-202ENST00000517533 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
CTNNA1-202ENST00000517533 PPP4CP60510 307 aa9.84□□□□□ -0.83
CTNNA1-202ENST00000517533 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
CTNNA1-202ENST00000517533 WWC1Q8IX03 1113 aa9.84□□□□□ -0.83
CTNNA1-202ENST00000517533 ALG2Q9H553 416 aa9.84□□□□□ -0.83
CTNNA1-202ENST00000517533 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
CTNNA1-202ENST00000517533 Q3C1V9 767 aa9.83□□□□□ -0.84
CTNNA1-202ENST00000517533 WNT2BQ93097 391 aa9.83□□□□□ -0.84
CTNNA1-202ENST00000517533 UCN2Q96RP3 112 aa9.83□□□□□ -0.84
CTNNA1-202ENST00000517533 USB1Q9BQ65 265 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-202ENST00000517533 TSR3Q9UJK0 312 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-202ENST00000517533 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
CTNNA1-202ENST00000517533 CFAP70Q5T0N1 1121 aa9.82□□□□□ -0.84
CTNNA1-202ENST00000517533 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-202ENST00000517533 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
CTNNA1-202ENST00000517533 SALL2Q9Y467 1007 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-202ENST00000517533 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
CTNNA1-202ENST00000517533 GOLGA8CPA6NN73 597 aa9.8□□□□□ -0.84
CTNNA1-202ENST00000517533 SRPK2P78362 688 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-202ENST00000517533 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-202ENST00000517533 MAP10Q9P2G4 905 aa9.8□□□□□ -0.84
CTNNA1-202ENST00000517533 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-202ENST00000517533 PRR14Q9BWN1 585 aa9.79□□□□□ -0.84
CTNNA1-202ENST00000517533 PRDM9Q9NQV7 894 aa9.78□□□□□ -0.84
CTNNA1-202ENST00000517533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 POTEMA6NI47 508 aa9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 JUNDP17535 347 aa9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 RFX1P22670 979 aa9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.85
CTNNA1-202ENST00000517533 FBXO45P0C2W1 286 aa9.76□□□□□ -0.85
CTNNA1-202ENST00000517533 COPS2P61201 443 aa9.76□□□□□ -0.85
CTNNA1-202ENST00000517533 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
CTNNA1-202ENST00000517533 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
CTNNA1-202ENST00000517533 TLL1O43897 1013 aa9.75□□□□□ -0.85
CTNNA1-202ENST00000517533 NR1I2O75469 434 aa9.75□□□□□ -0.85
CTNNA1-202ENST00000517533 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
CTNNA1-202ENST00000517533 TRAIPQ9BWF2 469 aa9.75□□□□□ -0.85
CTNNA1-202ENST00000517533 OCSTAMPQ9BR26 566 aa9.74□□□□□ -0.85
CTNNA1-202ENST00000517533 DXOO77932 396 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-202ENST00000517533 PTPRNQ16849 979 aa9.73□□□□□ -0.85
CTNNA1-202ENST00000517533 TFIP11Q9UBB9 837 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms