RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MEGF6O75095 1541 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 COL9A1P20849 921 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 HOXD11P31277 338 aaPredicted RBP6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 MTFR1LQ9H019 292 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 ANO8Q9HCE9 1232 aaPredicted RBP6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 CARMIL1Q5VZK9 1371 aa6.16□□□□□ -1.42
SCARNA13-201ENST00000516672 TMEM131LA2VDJ0 1609 aa6.15□□□□□ -1.42
SCARNA13-201ENST00000516672 PLEKHD1A6NEE1 506 aa6.15□□□□□ -1.42
SCARNA13-201ENST00000516672 SLC26A8Q96RN1 970 aa6.15□□□□□ -1.42
SCARNA13-201ENST00000516672 PRDM6Q9NQX0 595 aa6.15□□□□□ -1.42
SCARNA13-201ENST00000516672 CCDC9Q9Y3X0 531 aaKnown RBP6.15□□□□□ -1.42
SCARNA13-201ENST00000516672 GOLGA3Q08378 1498 aa6.15□□□□□ -1.43
SCARNA13-201ENST00000516672 SLIT2O94813 1529 aa6.15□□□□□ -1.43
SCARNA13-201ENST00000516672 ARHGEF28Q8N1W1 1705 aaKnown RBP6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 MARF1Q9Y4F3 1742 aaKnown RBP6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 VPS72Q15906 364 aa6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 NLGN2Q8NFZ4 835 aa6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 FAM122AQ96E09 287 aa6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 ADAMTS7Q9UKP4 1686 aa6.14□□□□□ -1.43
SCARNA13-201ENST00000516672 C16orf71Q8IYS4 520 aaPredicted RBP6.13□□□□□ -1.43
SCARNA13-201ENST00000516672 COL25A1Q9BXS0 654 aaPredicted RBP6.13□□□□□ -1.43
SCARNA13-201ENST00000516672 C19orf44Q9H6X5 657 aa6.13□□□□□ -1.43
SCARNA13-201ENST00000516672 NMRK2Q9NPI5 230 aa6.13□□□□□ -1.43
SCARNA13-201ENST00000516672 MYOM2P54296 1465 aa6.12□□□□□ -1.43
SCARNA13-201ENST00000516672 EID1Q9Y6B2 187 aa6.12□□□□□ -1.43
SCARNA13-201ENST00000516672 NCOA3Q9Y6Q9 1424 aa6.12□□□□□ -1.43
SCARNA13-201ENST00000516672 TET3O43151 1660 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 USP32Q8NFA0 1604 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 COL22A1Q8NFW1 1626 aaPredicted RBP6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 SLIT1O75093 1534 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 EHBP1L1Q8N3D4 1523 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 HSPA8P11142 646 aaKnown RBP6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 FAM98CQ17RN3 349 aaKnown RBP6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 FAM9AQ8IZU1 332 aaPredicted RBP6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 UBR1Q8IWV7 1749 aa6.11□□□□□ -1.43
SCARNA13-201ENST00000516672 CICQ96RK0 1608 aaPredicted RBP6.1□□□□□ -1.43
SCARNA13-201ENST00000516672 TULP4Q9NRJ4 1543 aa6.1□□□□□ -1.43
SCARNA13-201ENST00000516672 GPATCH8Q9UKJ3 1502 aaKnown RBP6.1□□□□□ -1.43
SCARNA13-201ENST00000516672 CHGAP10645 457 aaKnown RBP6.1□□□□□ -1.43
SCARNA13-201ENST00000516672 CHIC1Q5VXU3 224 aa6.1□□□□□ -1.43
SCARNA13-201ENST00000516672 SOX10P56693 466 aa6.09□□□□□ -1.43
SCARNA13-201ENST00000516672 PLXNC1O60486 1568 aa6.09□□□□□ -1.43
SCARNA13-201ENST00000516672 FAM196AQ6ZSG2 479 aa6.08□□□□□ -1.44
SCARNA13-201ENST00000516672 MKRN1Q9UHC7 482 aaKnown RBP6.08□□□□□ -1.44
SCARNA13-201ENST00000516672 MYO5CQ9NQX4 1742 aa6.08□□□□□ -1.44
SCARNA13-201ENST00000516672 MST1RQ04912 1400 aa6.08□□□□□ -1.44
SCARNA13-201ENST00000516672 SZT2Q5T011 3432 aa6.07□□□□□ -1.44
SCARNA13-201ENST00000516672 SAMD9Q5K651 1589 aa6.07□□□□□ -1.44
SCARNA13-201ENST00000516672 MCOLN1Q9GZU1 580 aa6.07□□□□□ -1.44
SCARNA13-201ENST00000516672 PRAG1Q86YV5 1406 aa6.07□□□□□ -1.44
SCARNA13-201ENST00000516672 ARHGAP5Q13017 1502 aa6.06□□□□□ -1.44
SCARNA13-201ENST00000516672 NBPF15Q8N660 670 aa6.06□□□□□ -1.44
SCARNA13-201ENST00000516672 BCL11BQ9C0K0 894 aaPredicted RBP6.06□□□□□ -1.44
SCARNA13-201ENST00000516672 WBP1LQ9NX94 342 aa6.06□□□□□ -1.44
SCARNA13-201ENST00000516672 NUP153P49790 1475 aaKnown RBP6.06□□□□□ -1.44
SCARNA13-201ENST00000516672 NEXMIFQ5QGS0 1516 aa6.05□□□□□ -1.44
SCARNA13-201ENST00000516672 SMC1BQ8NDV3 1235 aa6.05□□□□□ -1.44
SCARNA13-201ENST00000516672 COL6A3P12111 3177 aa6.04□□□□□ -1.44
SCARNA13-201ENST00000516672 SOS2Q07890 1332 aaPredicted RBP6.04□□□□□ -1.44
SCARNA13-201ENST00000516672 KIF27Q86VH2 1401 aa6.04□□□□□ -1.44
SCARNA13-201ENST00000516672 PKD1L2Q7Z442 2459 aa6.04□□□□□ -1.44
SCARNA13-201ENST00000516672 PPEF1O14829 653 aaPredicted RBP6.03□□□□□ -1.44
SCARNA13-201ENST00000516672 P3H3Q8IVL6 736 aa6.03□□□□□ -1.44
SCARNA13-201ENST00000516672 CHD2O14647 1828 aaKnown RBP6.03□□□□□ -1.44
SCARNA13-201ENST00000516672 ABCA3Q99758 1704 aa6.02□□□□□ -1.45
SCARNA13-201ENST00000516672 STK32BQ9NY57 414 aa6.02□□□□□ -1.45
SCARNA13-201ENST00000516672 DCCP43146 1447 aa6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 SLC15A2Q16348 729 aa6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 BCANQ96GW7 911 aa6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 ZNF219Q9P2Y4 722 aaPredicted RBP6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 DACH1Q9UI36 760 aa6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 TMEM2Q9UHN6 1383 aa6.01□□□□□ -1.45
SCARNA13-201ENST00000516672 LAMC1P11047 1609 aa6□□□□□ -1.45
SCARNA13-201ENST00000516672 THSD7AQ9UPZ6 1657 aa6□□□□□ -1.45
SCARNA13-201ENST00000516672 WASHC2CQ9Y4E1 1318 aa5.99□□□□□ -1.45
SCARNA13-201ENST00000516672 PLCH1Q4KWH8 1693 aa5.99□□□□□ -1.45
SCARNA13-201ENST00000516672 PXDNLA1KZ92 1463 aa5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 CNTNAP1P78357 1384 aa5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 POLD1P28340 1107 aa5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 RGPD3A6NKT7 1758 aaPredicted RBP5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 RGPD4Q7Z3J3 1758 aa5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 SPAG9O60271 1321 aaKnown RBP5.98□□□□□ -1.45
SCARNA13-201ENST00000516672 NWD2Q9ULI1 1742 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 PREX2Q70Z35 1606 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 DGKZQ13574 1117 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 CREBZFQ9NS37 354 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 ADGRB3O60242 1522 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 SYCP2Q9BX26 1530 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 C10orf71Q711Q0 1435 aa5.97□□□□□ -1.45
SCARNA13-201ENST00000516672 UNC79Q9P2D8 2635 aa5.96□□□□□ -1.45
SCARNA13-201ENST00000516672 ERVK-7P63135 1459 aa5.96□□□□□ -1.45
SCARNA13-201ENST00000516672 RPRD2Q5VT52 1461 aaKnown RBP5.96□□□□□ -1.45
SCARNA13-201ENST00000516672 PLSCR1O15162 318 aa5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 VEGFBP49765 207 aa5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 PMFBP1Q8TBY8 1022 aa5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 RRAGCQ9HB90 399 aa5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 SPTBN5Q9NRC6 3674 aaKnown RBP5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 UNC80Q8N2C7 3258 aa5.96□□□□□ -1.46
SCARNA13-201ENST00000516672 CTTNBP2Q8WZ74 1663 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms