RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 PTMSP20962 102 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 DDX19BQ9UMR2 479 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 TNNQ9UQP3 1299 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 MTHFSP49914 203 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
SH3TC1-225ENST00000515682 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
SH3TC1-225ENST00000515682 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
SH3TC1-225ENST00000515682 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
SH3TC1-225ENST00000515682 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
SH3TC1-225ENST00000515682 TESK2Q96S53 571 aa16.9■□□□□ 0.3
SH3TC1-225ENST00000515682 FANCAO15360 1455 aa16.89■□□□□ 0.3
SH3TC1-225ENST00000515682 R3HCC1Q9Y3T6 440 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-225ENST00000515682 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
SH3TC1-225ENST00000515682 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
SH3TC1-225ENST00000515682 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
SH3TC1-225ENST00000515682 ZMYND15Q9H091 742 aa16.88■□□□□ 0.29
SH3TC1-225ENST00000515682 RRP9O43818 475 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-225ENST00000515682 EXOSC9Q06265 439 aaKnown RBP16.88■□□□□ 0.29
SH3TC1-225ENST00000515682 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
SH3TC1-225ENST00000515682 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
SH3TC1-225ENST00000515682 SLC52A1Q9NWF4 448 aa16.87■□□□□ 0.29
SH3TC1-225ENST00000515682 KIAA1211Q6ZU35 1233 aa16.87■□□□□ 0.29
SH3TC1-225ENST00000515682 CHMP4BQ9H444 224 aaKnown RBP16.87■□□□□ 0.29
SH3TC1-225ENST00000515682 MVPQ14764 893 aaKnown RBP16.86■□□□□ 0.29
SH3TC1-225ENST00000515682 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
SH3TC1-225ENST00000515682 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
SH3TC1-225ENST00000515682 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
SH3TC1-225ENST00000515682 GCC2Q8IWJ2 1684 aa16.85■□□□□ 0.29
SH3TC1-225ENST00000515682 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
SH3TC1-225ENST00000515682 PLCH2O75038 1416 aa16.84■□□□□ 0.29
SH3TC1-225ENST00000515682 CLCN1P35523 988 aa16.84■□□□□ 0.29
SH3TC1-225ENST00000515682 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
SH3TC1-225ENST00000515682 AAMPQ13685 434 aa16.84■□□□□ 0.29
SH3TC1-225ENST00000515682 RLBP1P12271 317 aa16.83■□□□□ 0.29
SH3TC1-225ENST00000515682 RIPK4P57078 832 aa16.82■□□□□ 0.28
SH3TC1-225ENST00000515682 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
SH3TC1-225ENST00000515682 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
SH3TC1-225ENST00000515682 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.82■□□□□ 0.28
SH3TC1-225ENST00000515682 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
SH3TC1-225ENST00000515682 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
SH3TC1-225ENST00000515682 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
SH3TC1-225ENST00000515682 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
SH3TC1-225ENST00000515682 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
SH3TC1-225ENST00000515682 TPM2P07951 284 aa16.8■□□□□ 0.28
SH3TC1-225ENST00000515682 BCORL1Q5H9F3 1711 aa16.8■□□□□ 0.28
SH3TC1-225ENST00000515682 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
SH3TC1-225ENST00000515682 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
SH3TC1-225ENST00000515682 MPNDQ8N594 471 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 ST18O60284 1047 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
SH3TC1-225ENST00000515682 BLMP54132 1417 aaPredicted RBP16.77■□□□□ 0.28
SH3TC1-225ENST00000515682 ATF7IPQ6VMQ6 1270 aa16.77■□□□□ 0.28
SH3TC1-225ENST00000515682 FBXO31Q5XUX0 539 aaPredicted RBP16.77■□□□□ 0.27
SH3TC1-225ENST00000515682 ZMYM4Q5VZL5 1548 aa16.77■□□□□ 0.27
SH3TC1-225ENST00000515682 WDR63Q8IWG1 891 aa16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 TMEM57Q8N5G2 664 aa16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 KDM5CP41229 1560 aa16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 SSFA2P28290 1259 aa16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 ISY1Q9ULR0 285 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-225ENST00000515682 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 TRAPPC8Q9Y2L5 1435 aa16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 SAMD9Q5K651 1589 aa16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 KIF16BQ96L93 1317 aa16.75■□□□□ 0.27
SH3TC1-225ENST00000515682 SSH1Q8WYL5 1049 aa16.74■□□□□ 0.27
SH3TC1-225ENST00000515682 AMPHP49418 695 aa16.74■□□□□ 0.27
SH3TC1-225ENST00000515682 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
SH3TC1-225ENST00000515682 IDI1Q13907 227 aa16.74■□□□□ 0.27
SH3TC1-225ENST00000515682 LTV1Q96GA3 475 aaPredicted RBP16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 ZSCAN30Q86W11 494 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 CHD1LQ86WJ1 897 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 THEMISQ8N1K5 641 aaPredicted RBP16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 COG3Q96JB2 828 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 SYCP2Q9BX26 1530 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 TRIM27P14373 513 aa16.73■□□□□ 0.27
SH3TC1-225ENST00000515682 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
SH3TC1-225ENST00000515682 NUCB2P80303 420 aa16.72■□□□□ 0.27
SH3TC1-225ENST00000515682 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
SH3TC1-225ENST00000515682 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 ARHGEF12Q9NZN5 1544 aa16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 CDC45O75419 566 aa16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 MCCP23508 829 aa16.71■□□□□ 0.27
SH3TC1-225ENST00000515682 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.26
SH3TC1-225ENST00000515682 HMOX1P09601 288 aa16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
SH3TC1-225ENST00000515682 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms