RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
PHF3-212ENST00000515594 RUNDC1Q96C34 613 aa16.55■□□□□ 0.24
PHF3-212ENST00000515594 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
PHF3-212ENST00000515594 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
PHF3-212ENST00000515594 FANCAO15360 1455 aa16.54■□□□□ 0.24
PHF3-212ENST00000515594 NLRP1Q9C000 1473 aa16.54■□□□□ 0.24
PHF3-212ENST00000515594 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
PHF3-212ENST00000515594 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
PHF3-212ENST00000515594 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
PHF3-212ENST00000515594 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
PHF3-212ENST00000515594 DEPDC5O75140 1603 aa16.52■□□□□ 0.24
PHF3-212ENST00000515594 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.23
PHF3-212ENST00000515594 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
PHF3-212ENST00000515594 EIF5BO60841 1220 aaKnown RBP16.51■□□□□ 0.23
PHF3-212ENST00000515594 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
PHF3-212ENST00000515594 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
PHF3-212ENST00000515594 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
PHF3-212ENST00000515594 KIF1BO60333 1816 aa16.5■□□□□ 0.23
PHF3-212ENST00000515594 STK26Q9P289 416 aa16.5■□□□□ 0.23
PHF3-212ENST00000515594 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
PHF3-212ENST00000515594 MFAP1P55081 439 aaKnown RBP16.5■□□□□ 0.23
PHF3-212ENST00000515594 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
PHF3-212ENST00000515594 GGNBP2Q9H3C7 697 aa16.49■□□□□ 0.23
PHF3-212ENST00000515594 PPRC1Q5VV67 1664 aaKnown RBP16.48■□□□□ 0.23
PHF3-212ENST00000515594 FBLN1P23142 703 aa16.48■□□□□ 0.23
PHF3-212ENST00000515594 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
PHF3-212ENST00000515594 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
PHF3-212ENST00000515594 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 IQSEC2Q5JU85 1478 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 BECN1Q14457 450 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 PMFBP1Q8TBY8 1022 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
PHF3-212ENST00000515594 VWDEQ8N2E2 1590 aa16.46■□□□□ 0.23
PHF3-212ENST00000515594 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
PHF3-212ENST00000515594 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.23
PHF3-212ENST00000515594 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
PHF3-212ENST00000515594 MYOM2P54296 1465 aa16.46■□□□□ 0.23
PHF3-212ENST00000515594 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
PHF3-212ENST00000515594 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
PHF3-212ENST00000515594 QRICH2Q9H0J4 1663 aa16.45■□□□□ 0.22
PHF3-212ENST00000515594 MVPQ14764 893 aaKnown RBP16.45■□□□□ 0.22
PHF3-212ENST00000515594 TRIM27P14373 513 aa16.44■□□□□ 0.22
PHF3-212ENST00000515594 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
PHF3-212ENST00000515594 IFT172Q9UG01 1749 aa16.44■□□□□ 0.22
PHF3-212ENST00000515594 EFCAB6Q5THR3 1501 aa16.44■□□□□ 0.22
PHF3-212ENST00000515594 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
PHF3-212ENST00000515594 DZIP1LQ8IYY4 767 aaKnown RBP16.44■□□□□ 0.22
PHF3-212ENST00000515594 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
PHF3-212ENST00000515594 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
PHF3-212ENST00000515594 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
PHF3-212ENST00000515594 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
PHF3-212ENST00000515594 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
PHF3-212ENST00000515594 NPATQ14207 1427 aa16.42■□□□□ 0.22
PHF3-212ENST00000515594 ZKSCAN2Q63HK3 967 aa16.42■□□□□ 0.22
PHF3-212ENST00000515594 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
PHF3-212ENST00000515594 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
PHF3-212ENST00000515594 SRPK2P78362 688 aaKnown RBP16.4■□□□□ 0.22
PHF3-212ENST00000515594 NINLQ9Y2I6 1382 aa16.4■□□□□ 0.22
PHF3-212ENST00000515594 KIDINS220Q9ULH0 1771 aa16.4■□□□□ 0.22
PHF3-212ENST00000515594 MYH16Q9H6N6 1097 aa16.4■□□□□ 0.22
PHF3-212ENST00000515594 CD109Q6YHK3 1445 aa16.4■□□□□ 0.22
PHF3-212ENST00000515594 TMEM57Q8N5G2 664 aa16.39■□□□□ 0.22
PHF3-212ENST00000515594 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.22
PHF3-212ENST00000515594 TRIM35Q9UPQ4 493 aa16.39■□□□□ 0.22
PHF3-212ENST00000515594 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.22
PHF3-212ENST00000515594 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 ADGRB1O14514 1584 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 SBNO2Q9Y2G9 1366 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 NGEFQ8N5V2 710 aa16.39■□□□□ 0.21
PHF3-212ENST00000515594 NRXN1Q9ULB1 1477 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 THUMPD2Q9BTF0 503 aaKnown RBP16.38■□□□□ 0.21
PHF3-212ENST00000515594 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 MYO3AQ8NEV4 1616 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
PHF3-212ENST00000515594 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 ADGRB3O60242 1522 aa16.38■□□□□ 0.21
PHF3-212ENST00000515594 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
PHF3-212ENST00000515594 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
PHF3-212ENST00000515594 ZC3H13Q5T200 1668 aaKnown RBP16.36■□□□□ 0.21
PHF3-212ENST00000515594 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
PHF3-212ENST00000515594 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
PHF3-212ENST00000515594 EVC2Q86UK5 1308 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 RIPK4P57078 832 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 PLEKHF1Q96S99 279 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 PPLO60437 1756 aa16.35■□□□□ 0.21
PHF3-212ENST00000515594 CCDC27Q2M243 656 aa16.34■□□□□ 0.21
PHF3-212ENST00000515594 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
PHF3-212ENST00000515594 XRCC6P12956 609 aaKnown RBP eCLIP16.34■□□□□ 0.217e-13■■■■■ 31.2
PHF3-212ENST00000515594 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.21
PHF3-212ENST00000515594 MCM4P33991 863 aa16.33■□□□□ 0.21
PHF3-212ENST00000515594 GLI2P10070 1586 aa16.33■□□□□ 0.2
PHF3-212ENST00000515594 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■□□□ 11.8
PHF3-212ENST00000515594 FYB1O15117 783 aa16.32■□□□□ 0.2
PHF3-212ENST00000515594 HMOX1P09601 288 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms