RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 PROSER2Q86WR7 435 aaPredicted RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 MRPL50Q8N5N7 158 aaKnown RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CHIC2Q9UKJ5 165 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 TRIM34Q9BYJ4 488 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 DDX11L8A8MPP1 907 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 DXOO77932 396 aaKnown RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CFHP08603 1231 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 LRCH3Q96II8 777 aa3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.46□□□□□ -1.86
AC025539.1-201ENST00000515343 NDUFV2P19404 249 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NDUFB9Q9Y6M9 179 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 FAM205CA6NFA0 338 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 FDX1P10109 184 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 PTPRNQ16849 979 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 WASHC4Q2M389 1173 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 THSD4Q6ZMP0 1018 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 MPNDQ8N594 471 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NFATC2IPQ8NCF5 419 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 NR1I2O75469 434 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 JUNDP17535 347 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 ANKK1Q8NFD2 765 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 PCDHB15Q9Y5E8 787 aa3.45□□□□□ -1.86
AC025539.1-201ENST00000515343 CFAP99D6REC4 459 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 SRPK2P78362 688 aaKnown RBP3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 IRF5Q13568 498 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 PRM3Q9NNZ6 103 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 QPCTQ16769 361 aa3.44□□□□□ -1.86
AC025539.1-201ENST00000515343 ALG2Q9H553 416 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 LZTS3O60299 673 aaPredicted RBP3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 USP17L8P0C7I0 530 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 FMNL1O95466 1100 aaPredicted RBP3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 APLP1P51693 650 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 ZNF592Q92610 1267 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 SNRKQ9NRH2 765 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 SERPINA10Q9UK55 444 aa3.43□□□□□ -1.86
AC025539.1-201ENST00000515343 RDH13Q8NBN7 331 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 USB1Q9BQ65 265 aaKnown RBP3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 C1orf115Q9H7X2 142 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 SMAPO00193 183 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 FUT2Q10981 343 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 ELOAQ14241 798 aaKnown RBP3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 TJAP1Q5JTD0 557 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 AXIN2Q9Y2T1 843 aa3.42□□□□□ -1.86
AC025539.1-201ENST00000515343 PPP4CP60510 307 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 FAM160A2Q8N612 972 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 ARMC2Q8NEN0 867 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 NLRP7Q8WX94 980 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 RNF166Q96A37 237 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 SLC27A5Q9Y2P5 690 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 WNT2BQ93097 391 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 MARVELD3Q96A59 401 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 EVA1BQ9NVM1 165 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 POLR3EQ9NVU0 708 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PPP1R15AO75807 674 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PLEKHM2Q8IWE5 1019 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PNMA1Q8ND90 353 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 CABLES1Q8TDN4 633 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 UBTFP17480 764 aaKnown RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 PRR7Q8TB68 274 aa3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 SEPT9Q9UHD8 586 aaPredicted RBP3.41□□□□□ -1.86
AC025539.1-201ENST00000515343 ADH1BP00325 375 aa3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 PDXDC2PQ6P474 469 aa3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 TRMT44Q8IYL2 757 aaKnown RBP3.4□□□□□ -1.86
AC025539.1-201ENST00000515343 WWC1Q8IX03 1113 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SCUBE3Q8IX30 993 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 HELBQ8NG08 1087 aaPredicted RBP3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 TRAIPQ9BWF2 469 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 C1QTNF2Q9BXJ5 285 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 IL21Q9HBE4 155 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 HPS5Q9UPZ3 1129 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 CTDSPL2Q05D32 466 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SH3BP5LQ7L8J4 393 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 SH3RF1Q7Z6J0 888 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 PHTF2Q8N3S3 785 aa3.4□□□□□ -1.87
AC025539.1-201ENST00000515343 PDE4CQ08493 712 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 KCNH2Q12809 1159 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 RPIAP49247 311 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 POM121Q96HA1 1249 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 OCSTAMPQ9BR26 566 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 ZPR1O75312 459 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 RGS20O76081 388 aa3.39□□□□□ -1.87
AC025539.1-201ENST00000515343 NR1H3Q13133 447 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 HOMEZQ8IX15 550 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 BLOC1S3Q6QNY0 202 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 CLUAP1Q96AJ1 413 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 FKBPLQ9UIM3 349 aa3.38□□□□□ -1.87
AC025539.1-201ENST00000515343 ESPNB1AK53 854 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 RAD21O60216 631 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 HMX1Q9NP08 348 aaPredicted RBP3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 PCDHB3Q9Y5E6 796 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 BCAMP50895 628 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 HCSTQ9UBK5 93 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 GUCA2AQ02747 115 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 MAP4K5Q9Y4K4 846 aa3.37□□□□□ -1.87
AC025539.1-201ENST00000515343 RNF19BQ6ZMZ0 732 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 HLA-CQ95604 372 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 WBP1LQ9NX94 342 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 CDV3Q9UKY7 258 aaKnown RBP3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 AP1G2O75843 785 aa3.36□□□□□ -1.87
AC025539.1-201ENST00000515343 CCNYL3P0C7X3 344 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms