RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
RAPGEF6-214ENST00000515170 HSPA2P54652 639 aa12.52□□□□□ -0.41
RAPGEF6-214ENST00000515170 BCAR3O75815 825 aa12.52□□□□□ -0.41
RAPGEF6-214ENST00000515170 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
RAPGEF6-214ENST00000515170 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
RAPGEF6-214ENST00000515170 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
RAPGEF6-214ENST00000515170 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
RAPGEF6-214ENST00000515170 CHD1O14646 1710 aa12.5□□□□□ -0.41
RAPGEF6-214ENST00000515170 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF6-214ENST00000515170 BECN1Q14457 450 aa12.5□□□□□ -0.41
RAPGEF6-214ENST00000515170 TNRQ92752 1358 aa12.5□□□□□ -0.41
RAPGEF6-214ENST00000515170 KCNJ4P48050 445 aa12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 ATAD2Q6PL18 1390 aa12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 DCTN1Q14203 1278 aa12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 DNMT1P26358 1616 aaKnown RBP12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.41
RAPGEF6-214ENST00000515170 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 USHBP1Q8N6Y0 703 aa12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 TESK2Q96S53 571 aa12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 PRAG1Q86YV5 1406 aa12.48□□□□□ -0.41
RAPGEF6-214ENST00000515170 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 ERICH6BQ5W0A0 696 aa12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 SCAF11Q99590 1463 aaKnown RBP12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 DZIP1LQ8IYY4 767 aaKnown RBP12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
RAPGEF6-214ENST00000515170 ABCA8O94911 1581 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 DDRGK1Q96HY6 314 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
RAPGEF6-214ENST00000515170 GNAI1P63096 354 aa12.46□□□□□ -0.42
RAPGEF6-214ENST00000515170 MBD5Q9P267 1494 aa12.46□□□□□ -0.42
RAPGEF6-214ENST00000515170 KDM6BO15054 1643 aa12.45□□□□□ -0.42
RAPGEF6-214ENST00000515170 NAP1L2Q9ULW6 460 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF6-214ENST00000515170 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
RAPGEF6-214ENST00000515170 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
RAPGEF6-214ENST00000515170 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
RAPGEF6-214ENST00000515170 SHANK2Q9UPX8 1470 aa12.44□□□□□ -0.42
RAPGEF6-214ENST00000515170 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 ATP7AQ04656 1500 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 UHRF1BP1LA0JNW5 1464 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 MCM10Q7L590 875 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 NCLP19338 710 aaKnown RBP12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 FGD1P98174 961 aa12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF6-214ENST00000515170 ACEP12821 1306 aa12.42□□□□□ -0.42
RAPGEF6-214ENST00000515170 PPP6R1Q9UPN7 881 aa12.42□□□□□ -0.42
RAPGEF6-214ENST00000515170 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
RAPGEF6-214ENST00000515170 WWC1Q8IX03 1113 aa12.42□□□□□ -0.42
RAPGEF6-214ENST00000515170 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 SLC4A3P48751 1232 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 ZNF530Q6P9A1 599 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 RIMS2Q9UQ26 1411 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 TTC37Q6PGP7 1564 aa12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF6-214ENST00000515170 KCNA6P17658 529 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 GTF2E1P29083 439 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 LNPKQ9C0E8 428 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 FYB1O15117 783 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 HMMRO75330 724 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 SKAP1Q86WV1 359 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 ADGRL2O95490 1459 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
RAPGEF6-214ENST00000515170 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
RAPGEF6-214ENST00000515170 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
RAPGEF6-214ENST00000515170 GORABQ5T7V8 394 aa12.39□□□□□ -0.43
RAPGEF6-214ENST00000515170 CENPQQ7L2Z9 268 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF6-214ENST00000515170 DDX19BQ9UMR2 479 aa12.39□□□□□ -0.43
RAPGEF6-214ENST00000515170 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 PDE4AP27815 886 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 GAS2L2Q8NHY3 880 aa12.38□□□□□ -0.43
RAPGEF6-214ENST00000515170 SAMD9LQ8IVG5 1584 aa12.37□□□□□ -0.43
RAPGEF6-214ENST00000515170 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
RAPGEF6-214ENST00000515170 SLC4A2P04920 1241 aa12.37□□□□□ -0.43
RAPGEF6-214ENST00000515170 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
RAPGEF6-214ENST00000515170 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
RAPGEF6-214ENST00000515170 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms