RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 SOX12O15370 315 aa11.02□□□□□ -0.64
GPBP1-208ENST00000514387 SNX21Q969T3 373 aa11.02□□□□□ -0.64
GPBP1-208ENST00000514387 CLUAP1Q96AJ1 413 aa11.02□□□□□ -0.65
GPBP1-208ENST00000514387 DDIT3P35638 169 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 TRPM1Q7Z4N2 1603 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 PIK3C2GO75747 1445 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 E9PSI1 815 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 CLEC17AQ6ZS10 378 aa11.01□□□□□ -0.65
GPBP1-208ENST00000514387 HSCBQ8IWL3 235 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 WDR62O43379 1518 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 CROCC2H7BZ55 1655 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 NPC1L1Q9UHC9 1359 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 PLEKHH1Q9ULM0 1364 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 SEC24BO95487 1268 aa11□□□□□ -0.65
GPBP1-208ENST00000514387 EIF4G3O43432 1585 aaKnown RBP11□□□□□ -0.65
GPBP1-208ENST00000514387 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.653e-6■■■■□ 21.3
GPBP1-208ENST00000514387 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
GPBP1-208ENST00000514387 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
GPBP1-208ENST00000514387 GZF1Q9H116 711 aaPredicted RBP10.99□□□□□ -0.65
GPBP1-208ENST00000514387 ITSN2Q9NZM3 1697 aa10.99□□□□□ -0.65
GPBP1-208ENST00000514387 MAFGO15525 162 aa10.99□□□□□ -0.65
GPBP1-208ENST00000514387 NOL7Q9UMY1 257 aaKnown RBP10.99□□□□□ -0.65
GPBP1-208ENST00000514387 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
GPBP1-208ENST00000514387 IGHDP01880 384 aa10.99□□□□□ -0.65
GPBP1-208ENST00000514387 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
GPBP1-208ENST00000514387 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
GPBP1-208ENST00000514387 RTEL1-TNFRSF6BF6WH68 1400 aa10.98□□□□□ -0.65
GPBP1-208ENST00000514387 PSMD1Q99460 953 aa10.98□□□□□ -0.65
GPBP1-208ENST00000514387 CCDC94Q9BW85 323 aaPredicted RBP10.98□□□□□ -0.65
GPBP1-208ENST00000514387 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
GPBP1-208ENST00000514387 EGFL6Q8IUX8 553 aa10.98□□□□□ -0.65
GPBP1-208ENST00000514387 CFAP65Q6ZU64 1925 aaKnown RBP10.98□□□□□ -0.65
GPBP1-208ENST00000514387 NUP160Q12769 1436 aa10.98□□□□□ -0.65
GPBP1-208ENST00000514387 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
GPBP1-208ENST00000514387 GOLGA6L22H0YM25 854 aa10.97□□□□□ -0.65
GPBP1-208ENST00000514387 NASPP49321 788 aaPredicted RBP10.97□□□□□ -0.65
GPBP1-208ENST00000514387 SASS6Q6UVJ0 657 aa10.97□□□□□ -0.65
GPBP1-208ENST00000514387 RWDD1Q9H446 243 aaPredicted RBP10.97□□□□□ -0.65
GPBP1-208ENST00000514387 PKD2Q13563 968 aa10.97□□□□□ -0.65
GPBP1-208ENST00000514387 C22orf23Q9BZE7 217 aa10.97□□□□□ -0.65
GPBP1-208ENST00000514387 ADAMTS8Q9UP79 889 aa10.97□□□□□ -0.65
GPBP1-208ENST00000514387 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.65
GPBP1-208ENST00000514387 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
GPBP1-208ENST00000514387 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.66
GPBP1-208ENST00000514387 PTPRGP23470 1445 aa10.96□□□□□ -0.66
GPBP1-208ENST00000514387 PRAG1Q86YV5 1406 aa10.96□□□□□ -0.66
GPBP1-208ENST00000514387 VGLL3A8MV65 326 aa10.96□□□□□ -0.66
GPBP1-208ENST00000514387 ZNF445P59923 1031 aa10.96□□□□□ -0.66
GPBP1-208ENST00000514387 ZHX1Q9UKY1 873 aaPredicted RBP10.96□□□□□ -0.66
GPBP1-208ENST00000514387 TOPBP1Q92547 1522 aa10.95□□□□□ -0.66
GPBP1-208ENST00000514387 SENP3-EIF4A1A0A087X0R7 540 aa10.95□□□□□ -0.66
GPBP1-208ENST00000514387 ABCC10Q5T3U5 1492 aa10.95□□□□□ -0.66
GPBP1-208ENST00000514387 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
GPBP1-208ENST00000514387 PDLIM2Q96JY6 352 aa10.95□□□□□ -0.66
GPBP1-208ENST00000514387 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
GPBP1-208ENST00000514387 KLHL40Q2TBA0 621 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 ERBINQ96RT1 1412 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 UQCRHLA0A096LP55 91 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 UQCRHP07919 91 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 GAS2L3Q86XJ1 694 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 FAM13BQ9NYF5 915 aa10.94□□□□□ -0.66
GPBP1-208ENST00000514387 PRDM16Q9HAZ2 1276 aa10.93□□□□□ -0.66
GPBP1-208ENST00000514387 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
GPBP1-208ENST00000514387 TMF1P82094 1093 aa10.93□□□□□ -0.66
GPBP1-208ENST00000514387 NBPF11Q86T75 865 aa10.93□□□□□ -0.66
GPBP1-208ENST00000514387 R3HCC1Q9Y3T6 440 aaKnown RBP10.93□□□□□ -0.66
GPBP1-208ENST00000514387 HSP90AB1P08238 724 aaKnown RBP10.92□□□□□ -0.66
GPBP1-208ENST00000514387 TNPO1Q92973 898 aaKnown RBP10.92□□□□□ -0.66
GPBP1-208ENST00000514387 ZKSCAN5Q9Y2L8 839 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 PPP2R1AP30153 589 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 CCDC39Q9UFE4 941 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 PDZRN3Q9UPQ7 1066 aa10.92□□□□□ -0.66
GPBP1-208ENST00000514387 SYNMO15061 1565 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 YEATS2Q9ULM3 1422 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 HMGN5P82970 282 aaKnown RBP10.91□□□□□ -0.66
GPBP1-208ENST00000514387 PRIMPOLQ96LW4 560 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 PANK3Q9H999 370 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 NBPF1Q3BBV0 1214 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
GPBP1-208ENST00000514387 TESK2Q96S53 571 aa10.9□□□□□ -0.66
GPBP1-208ENST00000514387 CDK13Q14004 1512 aaKnown RBP10.9□□□□□ -0.66
GPBP1-208ENST00000514387 KIF16BQ96L93 1317 aa10.9□□□□□ -0.67
GPBP1-208ENST00000514387 IQGAP2Q13576 1575 aa10.9□□□□□ -0.67
GPBP1-208ENST00000514387 PATL2C9JE40 543 aaKnown RBP10.89□□□□□ -0.67
GPBP1-208ENST00000514387 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
GPBP1-208ENST00000514387 ASXL1Q8IXJ9 1541 aa10.89□□□□□ -0.67
GPBP1-208ENST00000514387 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
GPBP1-208ENST00000514387 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.679e-11■■■■□ 21.5
GPBP1-208ENST00000514387 SH3BP1Q9Y3L3 701 aa10.89□□□□□ -0.67
GPBP1-208ENST00000514387 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
GPBP1-208ENST00000514387 KANK1Q14678 1352 aa10.89□□□□□ -0.67
GPBP1-208ENST00000514387 TTC36A6NLP5 189 aa10.88□□□□□ -0.67
GPBP1-208ENST00000514387 FAM135AQ9P2D6 1515 aa10.88□□□□□ -0.67
GPBP1-208ENST00000514387 CERS3Q8IU89 383 aa10.88□□□□□ -0.67
GPBP1-208ENST00000514387 MYRIPQ8NFW9 859 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms