RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
GYPB-215ENST00000513677 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
GYPB-215ENST00000513677 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
GYPB-215ENST00000513677 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
GYPB-215ENST00000513677 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
GYPB-215ENST00000513677 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
GYPB-215ENST00000513677 CNTLNQ9NXG0 1405 aa9.41□□□□□ -0.9
GYPB-215ENST00000513677 ZNF335Q9H4Z2 1342 aaPredicted RBP9.41□□□□□ -0.9
GYPB-215ENST00000513677 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
GYPB-215ENST00000513677 GGT6Q6P531 493 aa9.41□□□□□ -0.9
GYPB-215ENST00000513677 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
GYPB-215ENST00000513677 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
GYPB-215ENST00000513677 ZMYM3Q14202 1370 aa9.4□□□□□ -0.9
GYPB-215ENST00000513677 MROH2AA6NES4 1674 aa9.4□□□□□ -0.9
GYPB-215ENST00000513677 ZNF454Q8N9F8 522 aa9.4□□□□□ -0.9
GYPB-215ENST00000513677 DDX12PQ92771 950 aa9.4□□□□□ -0.9
GYPB-215ENST00000513677 MYO3AQ8NEV4 1616 aa9.39□□□□□ -0.91
GYPB-215ENST00000513677 ATP7AQ04656 1500 aa9.38□□□□□ -0.91
GYPB-215ENST00000513677 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
GYPB-215ENST00000513677 SEMA3EO15041 775 aa9.38□□□□□ -0.91
GYPB-215ENST00000513677 PTGER2P43116 358 aa9.38□□□□□ -0.91
GYPB-215ENST00000513677 FOSBP53539 338 aa9.38□□□□□ -0.91
GYPB-215ENST00000513677 PPP4R3BQ5MIZ7 849 aa9.38□□□□□ -0.91
GYPB-215ENST00000513677 A2MP01023 1474 aa9.37□□□□□ -0.91
GYPB-215ENST00000513677 IQSEC2Q5JU85 1478 aa9.37□□□□□ -0.91
GYPB-215ENST00000513677 FYCO1Q9BQS8 1478 aa9.37□□□□□ -0.91
GYPB-215ENST00000513677 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
GYPB-215ENST00000513677 CFDP1Q9UEE9 299 aaPredicted RBP9.37□□□□□ -0.91
GYPB-215ENST00000513677 NPATQ14207 1427 aa9.37□□□□□ -0.91
GYPB-215ENST00000513677 PHF14O94880 888 aa9.36□□□□□ -0.91
GYPB-215ENST00000513677 MLLT3P42568 568 aaPredicted RBP9.36□□□□□ -0.91
GYPB-215ENST00000513677 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
GYPB-215ENST00000513677 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
GYPB-215ENST00000513677 CEP170BQ9Y4F5 1589 aaPredicted RBP9.36□□□□□ -0.91
GYPB-215ENST00000513677 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
GYPB-215ENST00000513677 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
GYPB-215ENST00000513677 ZNF142P52746 1687 aaPredicted RBP9.36□□□□□ -0.91
GYPB-215ENST00000513677 NBR1Q14596 966 aa9.35□□□□□ -0.91
GYPB-215ENST00000513677 INO80Q9ULG1 1556 aaPredicted RBP9.35□□□□□ -0.91
GYPB-215ENST00000513677 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
GYPB-215ENST00000513677 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
GYPB-215ENST00000513677 MTUS2Q5JR59 1369 aa9.34□□□□□ -0.91
GYPB-215ENST00000513677 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
GYPB-215ENST00000513677 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
GYPB-215ENST00000513677 ZNF687Q8N1G0 1237 aa9.33□□□□□ -0.92
GYPB-215ENST00000513677 PLEKHH2Q8IVE3 1493 aa9.33□□□□□ -0.92
GYPB-215ENST00000513677 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
GYPB-215ENST00000513677 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
GYPB-215ENST00000513677 EPAS1Q99814 870 aa9.32□□□□□ -0.92
GYPB-215ENST00000513677 PLA2R1Q13018 1463 aa9.32□□□□□ -0.92
GYPB-215ENST00000513677 POLR1AO95602 1720 aaPredicted RBP9.31□□□□□ -0.92
GYPB-215ENST00000513677 TESPA1A2RU30 521 aaPredicted RBP9.31□□□□□ -0.92
GYPB-215ENST00000513677 HSPA1LP34931 641 aa9.31□□□□□ -0.92
GYPB-215ENST00000513677 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
GYPB-215ENST00000513677 FBXW7Q969H0 707 aa9.31□□□□□ -0.92
GYPB-215ENST00000513677 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
GYPB-215ENST00000513677 ADAM33Q9BZ11 813 aa9.31□□□□□ -0.92
GYPB-215ENST00000513677 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
GYPB-215ENST00000513677 DNMT1P26358 1616 aaKnown RBP9.31□□□□□ -0.92
GYPB-215ENST00000513677 TIAM1Q13009 1591 aa9.3□□□□□ -0.92
GYPB-215ENST00000513677 A2ML1A8K2U0 1454 aa9.3□□□□□ -0.92
GYPB-215ENST00000513677 KIF3BO15066 747 aa9.3□□□□□ -0.92
GYPB-215ENST00000513677 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
GYPB-215ENST00000513677 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
GYPB-215ENST00000513677 OSBPP22059 807 aa9.29□□□□□ -0.92
GYPB-215ENST00000513677 PRIM1P49642 420 aaKnown RBP9.29□□□□□ -0.92
GYPB-215ENST00000513677 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
GYPB-215ENST00000513677 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
GYPB-215ENST00000513677 BCL2L12Q9HB09 334 aa9.29□□□□□ -0.92
GYPB-215ENST00000513677 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
GYPB-215ENST00000513677 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
GYPB-215ENST00000513677 TNRQ92752 1358 aa9.28□□□□□ -0.92
GYPB-215ENST00000513677 TOM1O60784 492 aa9.28□□□□□ -0.92
GYPB-215ENST00000513677 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
GYPB-215ENST00000513677 MAP3K7O43318 606 aa9.27□□□□□ -0.93
GYPB-215ENST00000513677 KCNK17Q96T54 332 aa9.27□□□□□ -0.93
GYPB-215ENST00000513677 WASHC2CQ9Y4E1 1318 aa9.27□□□□□ -0.93
GYPB-215ENST00000513677 NEURL4Q96JN8 1562 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 PTPREP23469 700 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 PSEN2P49810 448 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 SMYD5Q6GMV2 418 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 SHANK2Q9UPX8 1470 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 KDM5DQ9BY66 1539 aa9.26□□□□□ -0.93
GYPB-215ENST00000513677 DHX29Q7Z478 1369 aaKnown RBP9.25□□□□□ -0.93
GYPB-215ENST00000513677 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 PBX2P40425 430 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
GYPB-215ENST00000513677 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 MBD5Q9P267 1494 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 CPS1P31327 1500 aa9.25□□□□□ -0.93
GYPB-215ENST00000513677 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
GYPB-215ENST00000513677 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
GYPB-215ENST00000513677 UGGT1Q9NYU2 1555 aa9.24□□□□□ -0.93
GYPB-215ENST00000513677 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
GYPB-215ENST00000513677 NPHP4O75161 1426 aaPredicted RBP9.23□□□□□ -0.93
GYPB-215ENST00000513677 PZPP20742 1482 aa9.23□□□□□ -0.93
GYPB-215ENST00000513677 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms