RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.88	□□□□□ -0.19
PDCD6-210	ENST00000513582	DISP3	Q9P2K9	1392 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	VGLL3	A8MV65	326 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	NOL7	Q9UMY1	257 aa	Known RBP	13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	CCDC144A	A2RUR9	1427 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	NPM1	P06748	294 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	RLBP1	P12271	317 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	SSFA2	P28290	1259 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	ITSN2	Q9NZM3	1697 aa		13.87	□□□□□ -0.19
PDCD6-210	ENST00000513582	GOLGA6L22	H0YM25	854 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582		E9PSI1	815 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	IGSF3	O75054	1194 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	RAB3GAP1	Q15042	981 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	UTP14C	Q5TAP6	766 aa	Known RBP	13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	CAVIN1	Q6NZI2	390 aa	Known RBP	13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	FAM177B	A6PVY3	158 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	MLEC	Q14165	292 aa		13.86	□□□□□ -0.19
PDCD6-210	ENST00000513582	RWDD1	Q9H446	243 aa	Predicted RBP	13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	UHRF1BP1	Q6BDS2	1440 aa		13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	ZNF500	O60304	480 aa	Predicted RBP	13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	TRMT2A	Q8IZ69	625 aa	Known RBP	13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	INSR	P06213	1382 aa		13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	SASS6	Q6UVJ0	657 aa		13.85	□□□□□ -0.19
PDCD6-210	ENST00000513582	TMEM132E	Q6IEE7	984 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	SOX12	O15370	315 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	ADGRL2	O95490	1459 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	DDIT3	P35638	169 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	TPRN	Q4KMQ1	711 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	MPND	Q8N594	471 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	RBSN	Q9H1K0	784 aa		13.84	□□□□□ -0.19
PDCD6-210	ENST00000513582	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.83	□□□□□ -0.2
PDCD6-210	ENST00000513582	MORC1	Q86VD1	984 aa		13.83	□□□□□ -0.2
PDCD6-210	ENST00000513582	CSPP1	Q1MSJ5	1256 aa		13.83	□□□□□ -0.2
PDCD6-210	ENST00000513582	ZKSCAN5	Q9Y2L8	839 aa		13.83	□□□□□ -0.2
PDCD6-210	ENST00000513582	EFCAB2	Q5VUJ9	269 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	PLCD3	Q8N3E9	789 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	C9orf84	Q5VXU9	1444 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	MCTP1	Q6DN14	999 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	SPAG9	O60271	1321 aa	Known RBP	13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	SPDYE4	A6NLX3	237 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	CFAP70	Q5T0N1	1121 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	SMC5	Q8IY18	1101 aa		13.82	□□□□□ -0.2
PDCD6-210	ENST00000513582	CD2BP2	O95400	341 aa	Known RBP	13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	ADGB	Q8N7X0	1667 aa		13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	FTSJ3	Q8IY81	847 aa	Known RBP	13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	KLHL40	Q2TBA0	621 aa		13.81	□□□□□ -0.2
PDCD6-210	ENST00000513582	ZBTB22	O15209	634 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	PTMA	P06454	111 aa	Known RBP	13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	PTMS	P20962	102 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	PRIM1	P49642	420 aa	Known RBP	13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	ZSCAN23	Q3MJ62	389 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	SYNJ2	O15056	1496 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	RNF214	Q8ND24	703 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	TESK2	Q96S53	571 aa		13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	RBM42	Q9BTD8	480 aa	Known RBP	13.8	□□□□□ -0.2
PDCD6-210	ENST00000513582	BAG4	O95429	457 aa	Known RBP	13.79	□□□□□ -0.2
PDCD6-210	ENST00000513582	ATP2B3	Q16720	1220 aa		13.79	□□□□□ -0.2
PDCD6-210	ENST00000513582	HS1BP3	Q53T59	392 aa		13.79	□□□□□ -0.2
PDCD6-210	ENST00000513582	RBM27	Q9P2N5	1060 aa	Known RBP	13.79	□□□□□ -0.2
PDCD6-210	ENST00000513582	ELL2	O00472	640 aa	Predicted RBP	13.78	□□□□□ -0.2
PDCD6-210	ENST00000513582	RSPH4A	Q5TD94	716 aa		13.78	□□□□□ -0.2
PDCD6-210	ENST00000513582	TMEM51	Q9NW97	253 aa		13.78	□□□□□ -0.2
PDCD6-210	ENST00000513582	CGN	Q9P2M7	1197 aa	Known RBP	13.78	□□□□□ -0.2
PDCD6-210	ENST00000513582	EIF4G3	O43432	1585 aa	Known RBP	13.78	□□□□□ -0.2
PDCD6-210	ENST00000513582	APBB1	O00213	710 aa		13.77	□□□□□ -0.2
PDCD6-210	ENST00000513582	RARS	P54136	660 aa	Known RBP	13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	NCOA3	Q9Y6Q9	1424 aa		13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	NUTM2F	A1L443	756 aa		13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	SRPK2	P78362	688 aa	Known RBP	13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	GAS2L2	Q8NHY3	880 aa		13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	GTPBP4	Q9BZE4	634 aa	Known RBP	13.77	□□□□□ -0.21
PDCD6-210	ENST00000513582	KIF20A	O95235	890 aa		13.76	□□□□□ -0.21
PDCD6-210	ENST00000513582	ZNF710	Q8N1W2	664 aa		13.76	□□□□□ -0.21
PDCD6-210	ENST00000513582	SNX21	Q969T3	373 aa		13.76	□□□□□ -0.21
PDCD6-210	ENST00000513582	CDCA8	Q53HL2	280 aa		13.76	□□□□□ -0.21
PDCD6-210	ENST00000513582	PDLIM2	Q96JY6	352 aa		13.76	□□□□□ -0.21
PDCD6-210	ENST00000513582	ARHGEF12	Q9NZN5	1544 aa		13.75	□□□□□ -0.21
PDCD6-210	ENST00000513582	LETM1	O95202	739 aa	Predicted RBP	13.75	□□□□□ -0.21
PDCD6-210	ENST00000513582	WWC1	Q8IX03	1113 aa		13.75	□□□□□ -0.21
PDCD6-210	ENST00000513582	CCDC39	Q9UFE4	941 aa		13.75	□□□□□ -0.21
PDCD6-210	ENST00000513582	SHANK2	Q9UPX8	1470 aa		13.75	□□□□□ -0.21
PDCD6-210	ENST00000513582		K7ELQ4	463 aa	Predicted RBP	13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	ZNF445	P59923	1031 aa		13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	ERBIN	Q96RT1	1412 aa		13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	CDK11B	P21127	795 aa	Known RBP	13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	MYRIP	Q8NFW9	859 aa		13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	ZNF830	Q96NB3	372 aa	Predicted RBP	13.74	□□□□□ -0.21
PDCD6-210	ENST00000513582	SYCE3	A1L190	88 aa		13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	PRPF40A	O75400	957 aa	Known RBP	13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	NINL	Q9Y2I6	1382 aa		13.73	□□□□□ -0.21
PDCD6-210	ENST00000513582	RBM25	P49756	843 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms