RNA–Protein interactions for RNA: ENST00000513367.1

SRPK1-213, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-213ENST00000513367 AKNAQ7Z591 1439 aa10.94□□□□□ -0.66
SRPK1-213ENST00000513367 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
SRPK1-213ENST00000513367 V9GY48 417 aaPredicted RBP10.93□□□□□ -0.66
SRPK1-213ENST00000513367 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
SRPK1-213ENST00000513367 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
SRPK1-213ENST00000513367 SETD1BQ9UPS6 1966 aaKnown RBP10.92□□□□□ -0.66
SRPK1-213ENST00000513367 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
SRPK1-213ENST00000513367 PPP4CP60510 307 aa10.91□□□□□ -0.66
SRPK1-213ENST00000513367 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
SRPK1-213ENST00000513367 PDZRN3Q9UPQ7 1066 aa10.91□□□□□ -0.66
SRPK1-213ENST00000513367 ATP10BO94823 1461 aa10.91□□□□□ -0.66
SRPK1-213ENST00000513367 ZFYVE16Q7Z3T8 1539 aa10.9□□□□□ -0.66
SRPK1-213ENST00000513367 MTRQ99707 1265 aa10.9□□□□□ -0.66
SRPK1-213ENST00000513367 HSPA1LP34931 641 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 ZNF516Q92618 1163 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 EPAS1Q99814 870 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 FHOD3Q2V2M9 1422 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 ARHGEF12Q9NZN5 1544 aa10.89□□□□□ -0.67
SRPK1-213ENST00000513367 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
SRPK1-213ENST00000513367 GOLGA3Q08378 1498 aa10.87□□□□□ -0.67
SRPK1-213ENST00000513367 RAPGEF2Q9Y4G8 1499 aa10.87□□□□□ -0.67
SRPK1-213ENST00000513367 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
SRPK1-213ENST00000513367 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
SRPK1-213ENST00000513367 IL21Q9HBE4 155 aa10.86□□□□□ -0.67
SRPK1-213ENST00000513367 CTTNBP2Q8WZ74 1663 aa10.85□□□□□ -0.67
SRPK1-213ENST00000513367 ZNF335Q9H4Z2 1342 aaPredicted RBP10.85□□□□□ -0.67
SRPK1-213ENST00000513367 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
SRPK1-213ENST00000513367 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
SRPK1-213ENST00000513367 HECW1Q76N89 1606 aa10.84□□□□□ -0.67
SRPK1-213ENST00000513367 SMAPO00193 183 aa10.84□□□□□ -0.67
SRPK1-213ENST00000513367 PIP4K2BP78356 416 aa10.84□□□□□ -0.67
SRPK1-213ENST00000513367 NKX2-3Q8TAU0 364 aa10.84□□□□□ -0.67
SRPK1-213ENST00000513367 P3H3Q8IVL6 736 aa10.83□□□□□ -0.68
SRPK1-213ENST00000513367 NCOA1Q15788 1441 aa10.83□□□□□ -0.68
SRPK1-213ENST00000513367 MAGI2Q86UL8 1455 aa10.82□□□□□ -0.68
SRPK1-213ENST00000513367 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
SRPK1-213ENST00000513367 DDX12PQ92771 950 aa10.82□□□□□ -0.68
SRPK1-213ENST00000513367 CFAP74Q9C0B2 1584 aa10.82□□□□□ -0.68
SRPK1-213ENST00000513367 C3orf80F5H4A9 247 aa10.81□□□□□ -0.68
SRPK1-213ENST00000513367 TSR1Q2NL82 804 aaKnown RBP10.81□□□□□ -0.68
SRPK1-213ENST00000513367 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
SRPK1-213ENST00000513367 C3P01024 1663 aa10.81□□□□□ -0.68
SRPK1-213ENST00000513367 ATP10AO60312 1499 aa10.81□□□□□ -0.68
SRPK1-213ENST00000513367 DPYSL4O14531 572 aa10.8□□□□□ -0.68
SRPK1-213ENST00000513367 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
SRPK1-213ENST00000513367 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
SRPK1-213ENST00000513367 POTECB2RU33 542 aa10.79□□□□□ -0.68
SRPK1-213ENST00000513367 CADPS2Q86UW7 1296 aa10.79□□□□□ -0.68
SRPK1-213ENST00000513367 CAMSAP1Q5T5Y3 1602 aa10.78□□□□□ -0.68
SRPK1-213ENST00000513367 TRIM67Q6ZTA4 783 aa10.77□□□□□ -0.69
SRPK1-213ENST00000513367 APLP1P51693 650 aa10.76□□□□□ -0.69
SRPK1-213ENST00000513367 SCAPERQ9BY12 1400 aa10.75□□□□□ -0.69
SRPK1-213ENST00000513367 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
SRPK1-213ENST00000513367 TOM1O60784 492 aa10.75□□□□□ -0.69
SRPK1-213ENST00000513367 RAPGEF6Q8TEU7 1601 aa10.75□□□□□ -0.69
SRPK1-213ENST00000513367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.74□□□□□ -0.694e-6■■■□□ 17.3
SRPK1-213ENST00000513367 EN1Q05925 392 aaPredicted RBP10.74□□□□□ -0.69
SRPK1-213ENST00000513367 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
SRPK1-213ENST00000513367 PLEKHD1A6NEE1 506 aa10.73□□□□□ -0.69
SRPK1-213ENST00000513367 MAP3K7O43318 606 aa10.73□□□□□ -0.69
SRPK1-213ENST00000513367 MYT1Q01538 1121 aa10.73□□□□□ -0.69
SRPK1-213ENST00000513367 ESF1Q9H501 851 aaKnown RBP10.73□□□□□ -0.69
SRPK1-213ENST00000513367 RGS17Q9UGC6 210 aaPredicted RBP10.73□□□□□ -0.69
SRPK1-213ENST00000513367 NBR1Q14596 966 aa10.72□□□□□ -0.69
SRPK1-213ENST00000513367 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
SRPK1-213ENST00000513367 SUPT6HQ7KZ85 1726 aaKnown RBP10.7□□□□□ -0.7
SRPK1-213ENST00000513367 RNF40O75150 1001 aa10.7□□□□□ -0.7
SRPK1-213ENST00000513367 PRSS12P56730 875 aa10.7□□□□□ -0.7
SRPK1-213ENST00000513367 COPS2P61201 443 aa10.7□□□□□ -0.7
SRPK1-213ENST00000513367 TATDN2Q93075 761 aa10.7□□□□□ -0.7
SRPK1-213ENST00000513367 EMID1Q96A84 441 aaPredicted RBP10.7□□□□□ -0.7
SRPK1-213ENST00000513367 NUP153P49790 1475 aaKnown RBP10.69□□□□□ -0.7
SRPK1-213ENST00000513367 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
SRPK1-213ENST00000513367 GGCXP38435 758 aa10.67□□□□□ -0.7
SRPK1-213ENST00000513367 LCE2AQ5TA79 106 aaPredicted RBP10.67□□□□□ -0.7
SRPK1-213ENST00000513367 PRIM1P49642 420 aaKnown RBP10.66□□□□□ -0.7
SRPK1-213ENST00000513367 PKDCCQ504Y2 493 aa10.66□□□□□ -0.7
SRPK1-213ENST00000513367 POTEAQ6S8J7 498 aa10.66□□□□□ -0.7
SRPK1-213ENST00000513367 DIP2CQ9Y2E4 1556 aa10.65□□□□□ -0.7
SRPK1-213ENST00000513367 AFAP1Q8N556 730 aa10.65□□□□□ -0.7
SRPK1-213ENST00000513367 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
SRPK1-213ENST00000513367 TCOF1Q13428 1488 aaKnown RBP10.65□□□□□ -0.7
SRPK1-213ENST00000513367 PLCH2O75038 1416 aa10.65□□□□□ -0.7
SRPK1-213ENST00000513367 ALKQ9UM73 1620 aa10.65□□□□□ -0.7
SRPK1-213ENST00000513367 SETD1AO15047 1707 aaKnown RBP10.64□□□□□ -0.71
SRPK1-213ENST00000513367 PLA2R1Q13018 1463 aa10.64□□□□□ -0.71
SRPK1-213ENST00000513367 NBPF26B4DH59 902 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 DGAT1O75907 488 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 SLC19A1P41440 591 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 NPATQ14207 1427 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 SAMD9Q5K651 1589 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 REREQ9P2R6 1566 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 CPS1P31327 1500 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 AGLP35573 1532 aa10.63□□□□□ -0.71
SRPK1-213ENST00000513367 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
SRPK1-213ENST00000513367 CNTLNQ9NXG0 1405 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms