RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 PIK3R5Q8WYR1 880 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 DDX12PQ92771 950 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 PLCD4Q9BRC7 762 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 ALG2Q9H553 416 aa4.54□□□□□ -1.68
PVT1-202ENST00000512617 UNC13AQ9UPW8 1703 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 PEX14O75381 377 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 SSFA2P28290 1259 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 CSPP1Q1MSJ5 1256 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 TUSC1Q2TAM9 212 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 CCDC144BQ3MJ40 725 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 EGFLAMQ63HQ2 1017 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 SPTY2D1Q68D10 685 aaPredicted RBP4.53□□□□□ -1.68
PVT1-202ENST00000512617 STK32AQ8WU08 396 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 KCNB2Q92953 911 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 VTI1AQ96AJ9 217 aa4.53□□□□□ -1.68
PVT1-202ENST00000512617 BICRAQ9NZM4 1560 aa4.53□□□□□ -1.69
PVT1-202ENST00000512617 SCAMP3O14828 347 aaKnown RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 MAP4K4O95819 1239 aaPredicted RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 C7P10643 843 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 ATP2B1P20020 1258 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 SOX11P35716 441 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 FGD1P98174 961 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 TAGLNQ01995 201 aaKnown RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 RALBP1Q15311 655 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 APBB1IPQ7Z5R6 666 aaPredicted RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 FBXO33Q7Z6M2 555 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 IFNL1Q8IU54 200 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 DHX38Q92620 1227 aaKnown RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 L3MBTL3Q96JM7 780 aaPredicted RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 CCDC136Q96JN2 1154 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 GJD4Q96KN9 370 aaPredicted RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 SPACA7Q96KW9 195 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 PRKAG2Q9UGJ0 569 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 ZMIZ1Q9ULJ6 1067 aa4.52□□□□□ -1.69
PVT1-202ENST00000512617 NOVA2Q9UNW9 492 aaKnown RBP4.52□□□□□ -1.69
PVT1-202ENST00000512617 PARNO95453 639 aaKnown RBP4.51□□□□□ -1.69
PVT1-202ENST00000512617 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.69
PVT1-202ENST00000512617 PTGER2P43116 358 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 HDLBPQ00341 1268 aaKnown RBP4.51□□□□□ -1.69
PVT1-202ENST00000512617 PSME1Q06323 249 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 SEMA3FQ13275 785 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 C9orf131Q5VYM1 1079 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 TBC1D9Q6ZT07 1266 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 PRR7Q8TB68 274 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 ZCRB1Q8TBF4 217 aaKnown RBP4.51□□□□□ -1.69
PVT1-202ENST00000512617 AKT1S1Q96B36 256 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 BACH2Q9BYV9 841 aa4.51□□□□□ -1.69
PVT1-202ENST00000512617 IQSEC3Q9UPP2 1182 aaPredicted RBP4.51□□□□□ -1.69
PVT1-202ENST00000512617 FARP1Q9Y4F1 1045 aaPredicted RBP4.51□□□□□ -1.69
PVT1-202ENST00000512617 CCDC194A0A1B0GVG4 234 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 SPTLC1O15269 473 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 ATP9BO43861 1147 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 PRIM1P49642 420 aaKnown RBP4.5□□□□□ -1.69
PVT1-202ENST00000512617 FOXK1P85037 733 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 GOLGA2Q08379 1002 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 FAM50AQ14320 339 aaKnown RBP4.5□□□□□ -1.69
PVT1-202ENST00000512617 SMC5Q8IY18 1101 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 TMC2Q8TDI7 906 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 NLRP7Q8WX94 980 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 UBA5Q9GZZ9 404 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
PVT1-202ENST00000512617 TBX22Q9Y458 520 aa4.5□□□□□ -1.69
PVT1-202ENST00000512617 NUTM2BA6NNL0 878 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 NUTM2EB1AL46 878 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 EIF3JO75822 258 aaKnown RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 QPCTQ16769 361 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 KANK4Q5T7N3 995 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 NUTM2DQ5VT03 806 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 RSBN1LQ6PCB5 846 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 CHRDL2Q6WN34 429 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 NUTM2AQ8IVF1 878 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 PMFBP1Q8TBY8 1022 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 SPIRE2Q8WWL2 714 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 ARMC5Q96C12 935 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 NAP1L5Q96NT1 182 aaPredicted RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 TINF2Q9BSI4 451 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 BRINP2Q9C0B6 783 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 PIF1Q9H611 641 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 ZSWIM4Q9H7M6 989 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 PRDM10Q9NQV6 1147 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 NLRP2Q9NX02 1062 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 TERF2IPQ9NYB0 399 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 CHPF2Q9P2E5 772 aa4.49□□□□□ -1.69
PVT1-202ENST00000512617 LAS1LQ9Y4W2 734 aaKnown RBP4.49□□□□□ -1.69
PVT1-202ENST00000512617 LZTS3O60299 673 aaPredicted RBP4.48□□□□□ -1.69
PVT1-202ENST00000512617 LILRB3O75022 631 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 OATP04181 439 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 MAPK1P28482 360 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 RAD51AP2Q09MP3 1159 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 EAPPQ56P03 285 aaPredicted RBP4.48□□□□□ -1.69
PVT1-202ENST00000512617 METTL3Q86U44 580 aaKnown RBP4.48□□□□□ -1.69
PVT1-202ENST00000512617 ZSCAN29Q8IWY8 852 aaPredicted RBP4.48□□□□□ -1.69
PVT1-202ENST00000512617 PLPP6Q8IY26 295 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 GPATCH11Q8N954 259 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 SLC43A3Q8NBI5 491 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 CCSER2Q9H7U1 834 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 CDHR5Q9HBB8 845 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 CAPN10Q9HC96 672 aa4.48□□□□□ -1.69
PVT1-202ENST00000512617 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms